| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is 109946921
Identifier: 109946921
GI number: 109946921
Start: 261670
End: 262458
Strand: Direct
Name: 109946921
Synonym: Hac_0308
Alternate gene names: NA
Gene position: 261670-262458 (Clockwise)
Preceding gene: 109946919
Following gene: 109946922
Centisome position: 16.84
GC content: 39.67
Gene sequence:
>789_bases ATGATATTAAGAGCGAGTGTGTTGAGCGTGTTCCTTCTTGTAAGTTTAGGGGCAGCCCCTGAAAGTCCGGCTAATAAGCA AATGCAAGACAATTTAGTTAAGGTGATTGAAAAACAAACTAGTAAAAAGGTGCGTATTTTAGAGACTAAATCTTTGAAAT CCAATCAAGATTTAAAAATCGTGGTGGTAGAAGACCCAGACACTAAATATCAAATCCCGCTTGTGGTGAGTAAGGATGGT AATTTAGTCATAGGGCTTAGCAATATCTTTTTTAGCAATAAAAGCGACGATGTGCAATTGGTCGCCGAAACCAATCAAAG AATCCAAACCCTTAATGCTACCCAGCAAAATAGCGCGAAATTGAACGCTATTTTTAATGAAGTGCCTGCTGATTATGTGG TAGAACTACCTTCCACTAACGCTGCAAATAAAGACAAGATCCTTTATATTGTCTCTGATCCCATGTGTCCGCATTGCCAA AGAGAGCTCACTAAACTCAGAGACCACTTGAAAGAAAACACCGTTAAAATGGTTATTGTGGGGTGGCTTGGGGTCAATTC GGCTAAAAAAGCGGCTTTGATCCAAGAAGAAATGGCACAGGCTAAGGCTAGGGGAGCGAGCGTGGAAGATAAAATCTCTA TCATTGAAAAGATTTATTCCACCCAATATGATATTAATGCCCAAAAAGAGCCTGAAGATTTACGCACTAAAGTGGAAAAT GTCACTAAAAAGATTTTTGAGCCCGGCGTGATTAAAGGCGTGCCTTTCTTGTATCATTATAGGTCATAA
Upstream 100 bases:
>100_bases TCTTTTAAGCCTTATAAAATAGGGGATTTTTATGGTATTATACCCATTTAAGAAGCTTATTTCTTTTGAGATTTAGGCTA ATGAACTTTAGGAGTTTTTA
Downstream 100 bases:
>100_bases CATAAGGCTACTCGCATGAAAAAACCATACAGAAAGATTTCTGATTATACGATCGTGGGTGGTTTGAGTGCATTAGTGAT GGTAAGCATCGTGGGGTGTA
Product: hypothetical protein
Products: NA
Alternate protein names: Protein Disulphide Isomerase; Protein Disulfide Isomerase; Protein-Disulfide Isomerase
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MILRASVLSVFLLVSLGAAPESPANKQMQDNLVKVIEKQTSKKVRILETKSLKSNQDLKIVVVEDPDTKYQIPLVVSKDG NLVIGLSNIFFSNKSDDVQLVAETNQRIQTLNATQQNSAKLNAIFNEVPADYVVELPSTNAANKDKILYIVSDPMCPHCQ RELTKLRDHLKENTVKMVIVGWLGVNSAKKAALIQEEMAQAKARGASVEDKISIIEKIYSTQYDINAQKEPEDLRTKVEN VTKKIFEPGVIKGVPFLYHYRS
Sequences:
>Translated_262_residues MILRASVLSVFLLVSLGAAPESPANKQMQDNLVKVIEKQTSKKVRILETKSLKSNQDLKIVVVEDPDTKYQIPLVVSKDG NLVIGLSNIFFSNKSDDVQLVAETNQRIQTLNATQQNSAKLNAIFNEVPADYVVELPSTNAANKDKILYIVSDPMCPHCQ RELTKLRDHLKENTVKMVIVGWLGVNSAKKAALIQEEMAQAKARGASVEDKISIIEKIYSTQYDINAQKEPEDLRTKVEN VTKKIFEPGVIKGVPFLYHYRS >Mature_262_residues MILRASVLSVFLLVSLGAAPESPANKQMQDNLVKVIEKQTSKKVRILETKSLKSNQDLKIVVVEDPDTKYQIPLVVSKDG NLVIGLSNIFFSNKSDDVQLVAETNQRIQTLNATQQNSAKLNAIFNEVPADYVVELPSTNAANKDKILYIVSDPMCPHCQ RELTKLRDHLKENTVKMVIVGWLGVNSAKKAALIQEEMAQAKARGASVEDKISIIEKIYSTQYDINAQKEPEDLRTKVEN VTKKIFEPGVIKGVPFLYHYRS
Specific function: Unknown
COG id: COG1651
COG function: function code O; Protein-disulfide isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29280; Mature: 29280
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILRASVLSVFLLVSLGAAPESPANKQMQDNLVKVIEKQTSKKVRILETKSLKSNQDLKI CEEHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEE VVVEDPDTKYQIPLVVSKDGNLVIGLSNIFFSNKSDDVQLVAETNQRIQTLNATQQNSAK EEEECCCCCEEEEEEEECCCCEEEEEHHEEECCCCCCEEEEECCHHHHHHHCCCCCCCHH LNAIFNEVPADYVVELPSTNAANKDKILYIVSDPMCPHCQRELTKLRDHLKENTVKMVIV HHHHHHHCCCCEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEE GWLGVNSAKKAALIQEEMAQAKARGASVEDKISIIEKIYSTQYDINAQKEPEDLRTKVEN EEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH VTKKIFEPGVIKGVPFLYHYRS HHHHHCCCCCCCCCCEEEEECC >Mature Secondary Structure MILRASVLSVFLLVSLGAAPESPANKQMQDNLVKVIEKQTSKKVRILETKSLKSNQDLKI CEEHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEE VVVEDPDTKYQIPLVVSKDGNLVIGLSNIFFSNKSDDVQLVAETNQRIQTLNATQQNSAK EEEECCCCCEEEEEEEECCCCEEEEEHHEEECCCCCCEEEEECCHHHHHHHCCCCCCCHH LNAIFNEVPADYVVELPSTNAANKDKILYIVSDPMCPHCQRELTKLRDHLKENTVKMVIV HHHHHHHCCCCEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEE GWLGVNSAKKAALIQEEMAQAKARGASVEDKISIIEKIYSTQYDINAQKEPEDLRTKVEN EEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH VTKKIFEPGVIKGVPFLYHYRS HHHHHCCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA