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The map label for this gene is fbcF [H]

Identifier: 109946914

GI number: 109946914

Start: 255396

End: 255899

Strand: Direct

Name: fbcF [H]

Synonym: Hac_0300

Alternate gene names: 109946914

Gene position: 255396-255899 (Clockwise)

Preceding gene: 109946913

Following gene: 109946915

Centisome position: 16.44

GC content: 45.44

Gene sequence:

>504_bases
ATGGCAGATATTAAAAGGCGTGATTTTTTAGGAATGAGCCTTGCTAGTGTTACAGCCATAGGAGCCATAGCGAGTCTAGT
GGCGATGAAAAAGACTTGGGATCCGCTTCCAAGCGTCGTTTCAGCCGGTTTTACAACCATAGATGTGGCGAGTATGCAAG
AAGGGCAGTTTTCCACGGTGGAATGGCGTGGGAAACCAGTCTATATTCTCAAGCGTTCTAAAAAAGAAAGCTTTAACGAA
AAGCGCGATTTTAAAATCGGCGAAAGCGTTTTTACCACAGCCATTCAAATTTGCACGCATTTAGGGTGCATCCCCACTTA
TCAAGATGAAGAAAAAGGTTTTTTATGCCCATGCCATGGGGGTCGTTTCACTTCTGATGGCGTGAATGTTGCCGGCACTC
CCCCTCCACGCCCTTTTGATATTCCGCCTTTTAAAGTTGAAGGCACTAAGATCACTTTTGGCGAAGCTGGGGCTGAATAC
AAAAACATGGTGGCTAAAGCGTAA

Upstream 100 bases:

>100_bases
AATTTTTTATTTTAAAAAGATTATTAAGAAGTTTGTTGTAGAATAGCCGTTTGCTATGCCTTTAGTCGTAAGGTAATAAT
CATTAAGGAGTTTTTTAATC

Downstream 100 bases:

>100_bases
GGAGAGTTTCAATGGCAGAGATAAAAAAAGCGAAAAATTTAGGCGAATGGTTGGACATGCGTCTTGGCACTAACAAGCTT
GTTAAAGTGCTAATGACAGA

Product: cytochrome b6-F complex iron-sulfur subunit

Products: NA

Alternate protein names: Rieske iron-sulfur protein; RISP [H]

Number of amino acids: Translated: 167; Mature: 166

Protein sequence:

>167_residues
MADIKRRDFLGMSLASVTAIGAIASLVAMKKTWDPLPSVVSAGFTTIDVASMQEGQFSTVEWRGKPVYILKRSKKESFNE
KRDFKIGESVFTTAIQICTHLGCIPTYQDEEKGFLCPCHGGRFTSDGVNVAGTPPPRPFDIPPFKVEGTKITFGEAGAEY
KNMVAKA

Sequences:

>Translated_167_residues
MADIKRRDFLGMSLASVTAIGAIASLVAMKKTWDPLPSVVSAGFTTIDVASMQEGQFSTVEWRGKPVYILKRSKKESFNE
KRDFKIGESVFTTAIQICTHLGCIPTYQDEEKGFLCPCHGGRFTSDGVNVAGTPPPRPFDIPPFKVEGTKITFGEAGAEY
KNMVAKA
>Mature_166_residues
ADIKRRDFLGMSLASVTAIGAIASLVAMKKTWDPLPSVVSAGFTTIDVASMQEGQFSTVEWRGKPVYILKRSKKESFNEK
RDFKIGESVFTTAIQICTHLGCIPTYQDEEKGFLCPCHGGRFTSDGVNVAGTPPPRPFDIPPFKVEGTKITFGEAGAEYK
NMVAKA

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG0723

COG function: function code C; Rieske Fe-S protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Caenorhabditis elegans, GI17540418, Length=123, Percent_Identity=30.8943089430894, Blast_Score=77, Evalue=5e-15,
Organism=Saccharomyces cerevisiae, GI6320811, Length=159, Percent_Identity=23.8993710691824, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR014349
- InterPro:   IPR005805
- InterPro:   IPR006311
- InterPro:   IPR019470
- InterPro:   IPR006317 [H]

Pfam domain/function: PF00355 Rieske; PF10399 UCR_Fe-S_N [H]

EC number: =1.10.2.2 [H]

Molecular weight: Translated: 18214; Mature: 18083

Theoretical pI: Translated: 8.63; Mature: 8.63

Prosite motif: PS00199 RIESKE_1 ; PS00200 RIESKE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADIKRRDFLGMSLASVTAIGAIASLVAMKKTWDPLPSVVSAGFTTIDVASMQEGQFSTV
CCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEECCCCCCCCEEE
EWRGKPVYILKRSKKESFNEKRDFKIGESVFTTAIQICTHLGCIPTYQDEEKGFLCPCHG
EECCCEEEEEECCCHHCCCHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCC
GRFTSDGVNVAGTPPPRPFDIPPFKVEGTKITFGEAGAEYKNMVAKA
CEECCCCCEECCCCCCCCCCCCCEEECCCEEEECCCCHHHHHHHHCC
>Mature Secondary Structure 
ADIKRRDFLGMSLASVTAIGAIASLVAMKKTWDPLPSVVSAGFTTIDVASMQEGQFSTV
CCCCCHHHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEECCCCCCCCEEE
EWRGKPVYILKRSKKESFNEKRDFKIGESVFTTAIQICTHLGCIPTYQDEEKGFLCPCHG
EECCCEEEEEECCCHHCCCHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCC
GRFTSDGVNVAGTPPPRPFDIPPFKVEGTKITFGEAGAEYKNMVAKA
CEECCCCCEECCCCCCCCCCCCCEEECCCEEEECCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2541921; 12597275 [H]