| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is tagE [C]
Identifier: 109946910
GI number: 109946910
Start: 250072
End: 250998
Strand: Direct
Name: tagE [C]
Synonym: Hac_0296
Alternate gene names: 109946910
Gene position: 250072-250998 (Clockwise)
Preceding gene: 109946909
Following gene: 109946911
Centisome position: 16.09
GC content: 39.27
Gene sequence:
>927_bases ATGCCGCAAAACCAACTCGTGATCACCATCATTGATGAATCAGGCTCTAAACAACTCAAATTCTCTAAAAATTTAAAACG CAACCTCATCATTGCTATTGCGTTTCTTTTATTGATTGTGGGGTTTGGCGTGGGTTTTTTAAAATTTTTGATCGCCAAAA TGGATACGATGACAAGCGAAAGGAATGCGGTTTTAAGGGATTTTAGGGATTTGTATCAAAAAAATTACGCCCTAGCAAAA GAGATCAAAAACAAACGAGAAGAAATTTTTATCGTGGGGCAAAAGATTCGGGGACTAGAATCCTTAATTGAAGTCAAAAG AGGGGCTAATGGGGGGGTGCACCTCTATGATGAAGTGGATTTAGAAAATTTGAATCTGGCTCAAAAACATTTAGCACTCA TGCTCATTCCTAATGGCATGCCCTTGAAAACTTATAGCGCGATTAAGCCCACCAAAGAAAGGAACCACCCCATTAAAAAG ATCAAAGGTATTGAATCTGGGCTTGATTTCATTGTGCCATTAAACACGCCTGTTTATGCGAGTGCTGATGGGATTGTGGA TTTTGTGAAGACTAATTCTAATGTGGGGTATGGGAACTTGGTACGCATTGAGCATGCGTTTGGTTTTAGCTCCATTTACA CGCACCTAGATCATGTCAATGTGCAACCTAAAAGCTTTATCCAAAAAGGGCAGTTGATTGGGTATAGCGGGAAGAGCGGG AATAGCGGTGGCGAAAAGTTGCATTATGAAGTGCGGTTTTTGGGTAAAATTTTAGACGCACAAAAATTTCTGACATGGAA TTTGGAACATTTTCAAAGCGCTTTAGAAGAAAATAAATTTATTGAATGGAAGAATTTGTTTTGGGTTTTAGAAGATATTA TCCAGCTCCAAGAGCATGTGGATAGAGACGCGTTAGTAAGCCGGTAA
Upstream 100 bases:
>100_bases CTTTGTTTGAAGATGTGAAAGAAAACGAAAATTATTTGGTGTATGGCTCATTTTTAGTGGTCAATGCTTTTTATGAACGC TATCAAAAGAAGAGGGATTG
Downstream 100 bases:
>100_bases GGATTTTGGTGTTTTTAGACAGGCGTTTGATTGTGATGGTTACGGACTCTAAAGGGAGTCGTTATATCAATGTGCATATA CTATTCCGTCAAATTGGCTT
Product: toxR-activated gene
Products: NA
Alternate protein names: Peptidase M; Metalloendopeptidase; M23 Family Peptidase; M24/M37 Family Peptidase; TagE Protein; M23 Peptidase Domain Protein; XR-Activated Protein; Cell Wall Endopeptidase; Metalloendopeptidase-Like Membrane Protein; Metallopeptidase; Peptidase Family Protein; M23/M37 Peptidase Domain-Containing Protein; M23/M37 Peptidase; Cell Wall Endopeptidase Family; XR-Activated Protein TagE; Peptidase Family; Secreted; Endopeptidase; M23 Peptidase Domain-Containing Protein; Membrane Metalloendopeptidase; M23 Family Peptidoglycan-Specific Endopeptidase; Lytic Transglycosylase Catalytic; TagE-Like Protein; Zn-Metallopeptidase; M23/M37 Family Endopeptidase; Peptidase Family M; XR-Activated Gene; M23/M37 Family Peptidase; Membrane Associated Metallopeptidases; Membrane-Bound Metallopeptidase; NlpD Fragment; Exported Peptidase; Secreted Protein
Number of amino acids: Translated: 308; Mature: 307
Protein sequence:
>308_residues MPQNQLVITIIDESGSKQLKFSKNLKRNLIIAIAFLLLIVGFGVGFLKFLIAKMDTMTSERNAVLRDFRDLYQKNYALAK EIKNKREEIFIVGQKIRGLESLIEVKRGANGGVHLYDEVDLENLNLAQKHLALMLIPNGMPLKTYSAIKPTKERNHPIKK IKGIESGLDFIVPLNTPVYASADGIVDFVKTNSNVGYGNLVRIEHAFGFSSIYTHLDHVNVQPKSFIQKGQLIGYSGKSG NSGGEKLHYEVRFLGKILDAQKFLTWNLEHFQSALEENKFIEWKNLFWVLEDIIQLQEHVDRDALVSR
Sequences:
>Translated_308_residues MPQNQLVITIIDESGSKQLKFSKNLKRNLIIAIAFLLLIVGFGVGFLKFLIAKMDTMTSERNAVLRDFRDLYQKNYALAK EIKNKREEIFIVGQKIRGLESLIEVKRGANGGVHLYDEVDLENLNLAQKHLALMLIPNGMPLKTYSAIKPTKERNHPIKK IKGIESGLDFIVPLNTPVYASADGIVDFVKTNSNVGYGNLVRIEHAFGFSSIYTHLDHVNVQPKSFIQKGQLIGYSGKSG NSGGEKLHYEVRFLGKILDAQKFLTWNLEHFQSALEENKFIEWKNLFWVLEDIIQLQEHVDRDALVSR >Mature_307_residues PQNQLVITIIDESGSKQLKFSKNLKRNLIIAIAFLLLIVGFGVGFLKFLIAKMDTMTSERNAVLRDFRDLYQKNYALAKE IKNKREEIFIVGQKIRGLESLIEVKRGANGGVHLYDEVDLENLNLAQKHLALMLIPNGMPLKTYSAIKPTKERNHPIKKI KGIESGLDFIVPLNTPVYASADGIVDFVKTNSNVGYGNLVRIEHAFGFSSIYTHLDHVNVQPKSFIQKGQLIGYSGKSGN SGGEKLHYEVRFLGKILDAQKFLTWNLEHFQSALEENKFIEWKNLFWVLEDIIQLQEHVDRDALVSR
Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]
COG id: COG0739
COG function: function code M; Membrane proteins related to metalloendopeptidases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081989, Length=189, Percent_Identity=28.042328042328, Blast_Score=70, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.4.24.- [C]
Molecular weight: Translated: 34997; Mature: 34866
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQNQLVITIIDESGSKQLKFSKNLKRNLIIAIAFLLLIVGFGVGFLKFLIAKMDTMTSE CCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RNAVLRDFRDLYQKNYALAKEIKNKREEIFIVGQKIRGLESLIEVKRGANGGVHLYDEVD HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHCCCCCEEEEECCC LENLNLAQKHLALMLIPNGMPLKTYSAIKPTKERNHPIKKIKGIESGLDFIVPLNTPVYA CCCCCHHHHCEEEEECCCCCCCCCHHCCCCCHHCCCCHHHHHHHHCCCCEEEECCCCCEE SADGIVDFVKTNSNVGYGNLVRIEHAFGFSSIYTHLDHVNVQPKSFIQKGQLIGYSGKSG CCCCCEEEEECCCCCCCCCEEEEEHHCCHHHHHHHHHCCCCCHHHHHCCCCEEEECCCCC NSGGEKLHYEVRFLGKILDAQKFLTWNLEHFQSALEENKFIEWKNLFWVLEDIIQLQEHV CCCCHHHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC DRDALVSR CHHHHCCC >Mature Secondary Structure PQNQLVITIIDESGSKQLKFSKNLKRNLIIAIAFLLLIVGFGVGFLKFLIAKMDTMTSE CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RNAVLRDFRDLYQKNYALAKEIKNKREEIFIVGQKIRGLESLIEVKRGANGGVHLYDEVD HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHCCCCCEEEEECCC LENLNLAQKHLALMLIPNGMPLKTYSAIKPTKERNHPIKKIKGIESGLDFIVPLNTPVYA CCCCCHHHHCEEEEECCCCCCCCCHHCCCCCHHCCCCHHHHHHHHCCCCEEEECCCCCEE SADGIVDFVKTNSNVGYGNLVRIEHAFGFSSIYTHLDHVNVQPKSFIQKGQLIGYSGKSG CCCCCEEEEECCCCCCCCCEEEEEHHCCHHHHHHHHHCCCCCHHHHHCCCCEEEECCCCC NSGGEKLHYEVRFLGKILDAQKFLTWNLEHFQSALEENKFIEWKNLFWVLEDIIQLQEHV CCCCHHHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC DRDALVSR CHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA