| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is folC [H]
Identifier: 109946909
GI number: 109946909
Start: 248912
End: 250072
Strand: Direct
Name: folC [H]
Synonym: Hac_0295
Alternate gene names: 109946909
Gene position: 248912-250072 (Clockwise)
Preceding gene: 109946908
Following gene: 109946910
Centisome position: 16.02
GC content: 35.92
Gene sequence:
>1161_bases TTGAAAGGATTGAAGGCGTTTTTAGAAACAAAGCCTAAAGAATACCATAAATTTGACCCTAGCCGTTTCATTCAAATTTA CAAGGATTTTAGAAACGCTTTTTTTGAGATTCAAGCAAAAGCCATTCACATTGTAGGGACGAATGGTAAGGGTAGCACAG GGCGGTTTTTAACCCTTTTATTAGCCGATCGAGGGTTTAAGGTGTTGCACTTCACTTCACCGCATGTTTTTGAATTTAGA GAACGCTTTTATTTGAATGGTTCTATCGTTAATGAAAGCGCTTTAGAAAACGCCCACCAGCAATTGCAACTGCACGCTTT CAGTAACGCTTGTTCGTATTTTGAATACGCTACCTTACTGGCTGTCATGTTGGCTAAAGATTGCGATTATCTAGTTTTAG AAGCAGGGCTTGGGGGGGAGTTTGACAGCACAAACGCTTTAGAAAAAACGCTGAGTGTTTTCACCCCCATTGACTATGAT CATAAGGAATTTTTAGGAGATAGTTTAGAAAGCATTGCAACCACCAAATTAAAGGCGATGAGCACTCTTAATATTGTCGC TTTGCAACAAGAACTAGTTTTAAATATAGCTCAAAAAATAGCCAAAGACAAACAAGCCCAATTAATTGTAGTTCAAAATG AGATCTCACAAGAAGTGAAAGACTATATTGAACGCTACCATTTAGCCCATTTTTTAGCGATGAATTTAGAAGTGGCTTTG AAGGCGTTTGAAACGCTTATGCCATGCAATAAACAAGAAGTTTTACAACATTTAAAGCCTTTGGATTTAATCGGTCGTTG CGAGCTTTTAAGCCCTAATATTTTAATAGATGTGGGGCATAATCCCCATAGTGCGAAAGCCTTAAAAGAAGAAATCAAGC GTGTTTTTAACACTAAAATCATTTTAATTTATAATTGCTATCAAGATAAAGACGCTTTTGGGGTGCTAGAAATTTTAAAA CCGGTAATTAAAAAGGTTTTGATTTTAGAATTAAACAAAGAAAGGGTGATTCAATTAGAAACGCTTCAAGGGATTTTAGA AAATTTAGGGTTAGAATACGCTTTGTTTGAAGATGTGAAAGAAAACGAAAATTATTTGGTGTATGGCTCATTTTTAGTGG TCAATGCTTTTTATGAACGCTATCAAAAGAAGAGGGATTGA
Upstream 100 bases:
>100_bases AACCGCTATTATGCGATCAATCAGGCTGTGGAGCAAACTTTGACTAAATTTGTAGCGCAAATCGCTTATGAAGGGAAATT CAATAATGAAAAATAGCCCT
Downstream 100 bases:
>100_bases TGCCGCAAAACCAACTCGTGATCACCATCATTGATGAATCAGGCTCTAAACAACTCAAATTCTCTAAAAATTTAAAACGC AACCTCATCATTGCTATTGC
Product: folylpolyglutamate synthase / dihydrofolate synthase
Products: NA
Alternate protein names: Folylpoly-gamma-glutamate synthetase; FPGS; Tetrahydrofolylpolyglutamate synthase; Tetrahydrofolate synthase [H]
Number of amino acids: Translated: 386; Mature: 386
Protein sequence:
>386_residues MKGLKAFLETKPKEYHKFDPSRFIQIYKDFRNAFFEIQAKAIHIVGTNGKGSTGRFLTLLLADRGFKVLHFTSPHVFEFR ERFYLNGSIVNESALENAHQQLQLHAFSNACSYFEYATLLAVMLAKDCDYLVLEAGLGGEFDSTNALEKTLSVFTPIDYD HKEFLGDSLESIATTKLKAMSTLNIVALQQELVLNIAQKIAKDKQAQLIVVQNEISQEVKDYIERYHLAHFLAMNLEVAL KAFETLMPCNKQEVLQHLKPLDLIGRCELLSPNILIDVGHNPHSAKALKEEIKRVFNTKIILIYNCYQDKDAFGVLEILK PVIKKVLILELNKERVIQLETLQGILENLGLEYALFEDVKENENYLVYGSFLVVNAFYERYQKKRD
Sequences:
>Translated_386_residues MKGLKAFLETKPKEYHKFDPSRFIQIYKDFRNAFFEIQAKAIHIVGTNGKGSTGRFLTLLLADRGFKVLHFTSPHVFEFR ERFYLNGSIVNESALENAHQQLQLHAFSNACSYFEYATLLAVMLAKDCDYLVLEAGLGGEFDSTNALEKTLSVFTPIDYD HKEFLGDSLESIATTKLKAMSTLNIVALQQELVLNIAQKIAKDKQAQLIVVQNEISQEVKDYIERYHLAHFLAMNLEVAL KAFETLMPCNKQEVLQHLKPLDLIGRCELLSPNILIDVGHNPHSAKALKEEIKRVFNTKIILIYNCYQDKDAFGVLEILK PVIKKVLILELNKERVIQLETLQGILENLGLEYALFEDVKENENYLVYGSFLVVNAFYERYQKKRD >Mature_386_residues MKGLKAFLETKPKEYHKFDPSRFIQIYKDFRNAFFEIQAKAIHIVGTNGKGSTGRFLTLLLADRGFKVLHFTSPHVFEFR ERFYLNGSIVNESALENAHQQLQLHAFSNACSYFEYATLLAVMLAKDCDYLVLEAGLGGEFDSTNALEKTLSVFTPIDYD HKEFLGDSLESIATTKLKAMSTLNIVALQQELVLNIAQKIAKDKQAQLIVVQNEISQEVKDYIERYHLAHFLAMNLEVAL KAFETLMPCNKQEVLQHLKPLDLIGRCELLSPNILIDVGHNPHSAKALKEEIKRVFNTKIILIYNCYQDKDAFGVLEILK PVIKKVLILELNKERVIQLETLQGILENLGLEYALFEDVKENENYLVYGSFLVVNAFYERYQKKRD
Specific function: Conversion of folates to polyglutamate derivatives [H]
COG id: COG0285
COG function: function code H; Folylpolyglutamate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the folylpolyglutamate synthase family [H]
Homologues:
Organism=Homo sapiens, GI66932984, Length=146, Percent_Identity=34.9315068493151, Blast_Score=84, Evalue=3e-16, Organism=Homo sapiens, GI66932990, Length=146, Percent_Identity=34.9315068493151, Blast_Score=84, Evalue=3e-16, Organism=Escherichia coli, GI1788654, Length=368, Percent_Identity=28.804347826087, Blast_Score=138, Evalue=7e-34, Organism=Caenorhabditis elegans, GI71984923, Length=319, Percent_Identity=25.705329153605, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17553150, Length=319, Percent_Identity=25.705329153605, Blast_Score=93, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17553148, Length=319, Percent_Identity=25.705329153605, Blast_Score=93, Evalue=3e-19, Organism=Saccharomyces cerevisiae, GI6323760, Length=330, Percent_Identity=25.1515151515152, Blast_Score=90, Evalue=6e-19, Organism=Saccharomyces cerevisiae, GI6324815, Length=314, Percent_Identity=28.0254777070064, Blast_Score=83, Evalue=6e-17, Organism=Drosophila melanogaster, GI24641571, Length=179, Percent_Identity=31.8435754189944, Blast_Score=81, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018109 - InterPro: IPR001645 - InterPro: IPR004101 - InterPro: IPR013221 [H]
Pfam domain/function: PF08245 Mur_ligase_M [H]
EC number: =6.3.2.17 [H]
Molecular weight: Translated: 44250; Mature: 44250
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGLKAFLETKPKEYHKFDPSRFIQIYKDFRNAFFEIQAKAIHIVGTNGKGSTGRFLTLL CCCHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHEEEEEEEEEEECCCCCCCCCEEEEE LADRGFKVLHFTSPHVFEFRERFYLNGSIVNESALENAHQQLQLHAFSNACSYFEYATLL ECCCCCEEEEECCCHHHHHHHHHEECCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVMLAKDCDYLVLEAGLGGEFDSTNALEKTLSVFTPIDYDHKEFLGDSLESIATTKLKAM HHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH STLNIVALQQELVLNIAQKIAKDKQAQLIVVQNEISQEVKDYIERYHLAHFLAMNLEVAL HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KAFETLMPCNKQEVLQHLKPLDLIGRCELLSPNILIDVGHNPHSAKALKEEIKRVFNTKI HHHHHHCCCCHHHHHHHCCCCCHHCCCEEECCCEEEECCCCCCHHHHHHHHHHHHHCCEE ILIYNCYQDKDAFGVLEILKPVIKKVLILELNKERVIQLETLQGILENLGLEYALFEDVK EEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHEEHHHHHHHHHHCCCCHHHHHHHH ENENYLVYGSFLVVNAFYERYQKKRD CCCCEEEEEHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKGLKAFLETKPKEYHKFDPSRFIQIYKDFRNAFFEIQAKAIHIVGTNGKGSTGRFLTLL CCCHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHEEEEEEEEEEECCCCCCCCCEEEEE LADRGFKVLHFTSPHVFEFRERFYLNGSIVNESALENAHQQLQLHAFSNACSYFEYATLL ECCCCCEEEEECCCHHHHHHHHHEECCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVMLAKDCDYLVLEAGLGGEFDSTNALEKTLSVFTPIDYDHKEFLGDSLESIATTKLKAM HHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH STLNIVALQQELVLNIAQKIAKDKQAQLIVVQNEISQEVKDYIERYHLAHFLAMNLEVAL HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KAFETLMPCNKQEVLQHLKPLDLIGRCELLSPNILIDVGHNPHSAKALKEEIKRVFNTKI HHHHHHCCCCHHHHHHHCCCCCHHCCCEEECCCEEEECCCCCCHHHHHHHHHHHHHCCEE ILIYNCYQDKDAFGVLEILKPVIKKVLILELNKERVIQLETLQGILENLGLEYALFEDVK EEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHEEHHHHHHHHHHCCCCHHHHHHHH ENENYLVYGSFLVVNAFYERYQKKRD CCCCEEEEEHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]