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The map label for this gene is ssb [H]

Identifier: 109946867

GI number: 109946867

Start: 207706

End: 208251

Strand: Direct

Name: ssb [H]

Synonym: Hac_0248

Alternate gene names: 109946867

Gene position: 207706-208251 (Clockwise)

Preceding gene: 109946866

Following gene: 109946868

Centisome position: 13.37

GC content: 40.48

Gene sequence:

>546_bases
ATGTTTAATAAAGTGATTATGGTAGGGCGTTTGACTAGGAATGTGGAGTTGAAATATTTGCCTAGCGGTTCAGCTGTAGC
TACAATAGGTTTGGCGACAAATAGGCGTTTTAAAAAACAAGACGGTACGCTAGGCGAAGAAGTGTGCTTTATAGATGTGC
GCTTGTTTGGGCGAACGGCTGAAATTGCCAATCAATATTTGAGCAAGGGGTCAAGCGTTTTAATAGAAGGGCGTTTGACT
TATGAAAGCTGGACGGATCAAATGGGCAAAAAAAATTCTCGCCACACTATCACAGCAGATGCGTTGCAATTTATGGACAA
GAAGTCAGACAACTCTCAAGCTAACGCCATGCAAGATAGTGTTATGCATGAGAATTTCAACAACGCTTATCCAACGAATT
ATAACGCCCCTAGCCAAGATCCTTTTAACCAAGCCCCTAGTTATTCTCAAAATGCTTATACTAAAGAGAATTTACAGGCA
CAGCCATCTAAATACCAAAACAGCGTGCCTGAAATCAATATTGATGAAGAAGAAATCCCCTTTTAA

Upstream 100 bases:

>100_bases
CGCTAAAGAAAAACACGAAAAAACCGAACACGCACACTCTCATCACACAGAGGAAGCAGGAAGTAAAGAATCTCATAGCG
AGTGAAAATAGGGGCTTATC

Downstream 100 bases:

>100_bases
GGGTGAAAATTTAAGGAGACATTATGGAAAAAAAACGCTATTCAAAGCGCTATTGCAGATACACTGAAGCTAAAATTAGC
TTTATTGACTATAAAGATTT

Product: single-stranded DNA-binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MFNKVIMVGRLTRNVELKYLPSGSAVATIGLATNRRFKKQDGTLGEEVCFIDVRLFGRTAEIANQYLSKGSSVLIEGRLT
YESWTDQMGKKNSRHTITADALQFMDKKSDNSQANAMQDSVMHENFNNAYPTNYNAPSQDPFNQAPSYSQNAYTKENLQA
QPSKYQNSVPEINIDEEEIPF

Sequences:

>Translated_181_residues
MFNKVIMVGRLTRNVELKYLPSGSAVATIGLATNRRFKKQDGTLGEEVCFIDVRLFGRTAEIANQYLSKGSSVLIEGRLT
YESWTDQMGKKNSRHTITADALQFMDKKSDNSQANAMQDSVMHENFNNAYPTNYNAPSQDPFNQAPSYSQNAYTKENLQA
QPSKYQNSVPEINIDEEEIPF
>Mature_181_residues
MFNKVIMVGRLTRNVELKYLPSGSAVATIGLATNRRFKKQDGTLGEEVCFIDVRLFGRTAEIANQYLSKGSSVLIEGRLT
YESWTDQMGKKNSRHTITADALQFMDKKSDNSQANAMQDSVMHENFNNAYPTNYNAPSQDPFNQAPSYSQNAYTKENLQA
QPSKYQNSVPEINIDEEEIPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Escherichia coli, GI1790494, Length=90, Percent_Identity=47.7777777777778, Blast_Score=86, Evalue=2e-18,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 20433; Mature: 20433

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNKVIMVGRLTRNVELKYLPSGSAVATIGLATNRRFKKQDGTLGEEVCFIDVRLFGRTA
CCCCEEEEEECCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEEECCCHH
EIANQYLSKGSSVLIEGRLTYESWTDQMGKKNSRHTITADALQFMDKKSDNSQANAMQDS
HHHHHHHHCCCEEEEEEEECHHHHHHHHCCCCCCCEEHHHHHHHHHCCCCCCHHHHHHHH
VMHENFNNAYPTNYNAPSQDPFNQAPSYSQNAYTKENLQAQPSKYQNSVPEINIDEEEIP
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHCCC
F
C
>Mature Secondary Structure
MFNKVIMVGRLTRNVELKYLPSGSAVATIGLATNRRFKKQDGTLGEEVCFIDVRLFGRTA
CCCCEEEEEECCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEEECCCHH
EIANQYLSKGSSVLIEGRLTYESWTDQMGKKNSRHTITADALQFMDKKSDNSQANAMQDS
HHHHHHHHCCCEEEEEEEECHHHHHHHHCCCCCCCEEHHHHHHHHHCCCCCCHHHHHHHH
VMHENFNNAYPTNYNAPSQDPFNQAPSYSQNAYTKENLQAQPSKYQNSVPEINIDEEEIP
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHCCC
F
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]