| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is 109946826
Identifier: 109946826
GI number: 109946826
Start: 173498
End: 173992
Strand: Direct
Name: 109946826
Synonym: Hac_0205
Alternate gene names: NA
Gene position: 173498-173992 (Clockwise)
Preceding gene: 109946825
Following gene: 109946827
Centisome position: 11.17
GC content: 40.2
Gene sequence:
>495_bases ATGGATACTGCAAGAGAGAACTTGAATGGCTCAAAAGAGCGTTTGAGTGGATCAGAATATTTAAGAGCAAATGCTTTAAT CTGGGGGATATGTGTTTACATATCCAATAGGGTTCTTTATGACCCAAGTGGATCAGCTAGCACTCCGATCTTTAACCCTA AAGACAGCTATTATGTGTGGCTAACGACTCTAATAGTGGCTTTATTGTCTAATCTCTTGTTTAATCCGCAAGGCAGGGGT TGTTATGAATTGCAAGTAAGATACCCTAGGTTTCTCAAATCCATTTTTAAGGCTAGGTTTTTTGGTGCGTTATATGACGC TGTGCTAGGAGCAAGATTGAGAGACTTTTATATAGTGCTTTTAACGATGCCCTTTTGTATCGCTATGCATGAAATTTCAG CGTATTGTGGGCATCCTAGCAACTTTCTTGTAGAGGCTTTGGCCGTTTTGGGGTTTCTATATTTTCTTAGGCTTTGCGCT AAATTGGGGTGGTGA
Upstream 100 bases:
>100_bases CCCAAGAGAACCTATCCGTGATTTTTATGATTACGGCTATAATTTTGGGCATGCTAGGTAATCTTAAATGAGCCAAGGTG ATGAGGCGAAAGGAAATAAC
Downstream 100 bases:
>100_bases GTTTAACTTGAAGTAACCAAATGGAGGGGAATAAGAGTATTAAAGAAATTTGAAGAGTTGGTTTTCATTGGTTTGTGTTA GAATAAAGAGAATTTAAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MDTARENLNGSKERLSGSEYLRANALIWGICVYISNRVLYDPSGSASTPIFNPKDSYYVWLTTLIVALLSNLLFNPQGRG CYELQVRYPRFLKSIFKARFFGALYDAVLGARLRDFYIVLLTMPFCIAMHEISAYCGHPSNFLVEALAVLGFLYFLRLCA KLGW
Sequences:
>Translated_164_residues MDTARENLNGSKERLSGSEYLRANALIWGICVYISNRVLYDPSGSASTPIFNPKDSYYVWLTTLIVALLSNLLFNPQGRG CYELQVRYPRFLKSIFKARFFGALYDAVLGARLRDFYIVLLTMPFCIAMHEISAYCGHPSNFLVEALAVLGFLYFLRLCA KLGW >Mature_164_residues MDTARENLNGSKERLSGSEYLRANALIWGICVYISNRVLYDPSGSASTPIFNPKDSYYVWLTTLIVALLSNLLFNPQGRG CYELQVRYPRFLKSIFKARFFGALYDAVLGARLRDFYIVLLTMPFCIAMHEISAYCGHPSNFLVEALAVLGFLYFLRLCA KLGW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18645; Mature: 18645
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTARENLNGSKERLSGSEYLRANALIWGICVYISNRVLYDPSGSASTPIFNPKDSYYVW CCCCHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCHHHH LTTLIVALLSNLLFNPQGRGCYELQVRYPRFLKSIFKARFFGALYDAVLGARLRDFYIVL HHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTMPFCIAMHEISAYCGHPSNFLVEALAVLGFLYFLRLCAKLGW HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDTARENLNGSKERLSGSEYLRANALIWGICVYISNRVLYDPSGSASTPIFNPKDSYYVW CCCCHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCHHHH LTTLIVALLSNLLFNPQGRGCYELQVRYPRFLKSIFKARFFGALYDAVLGARLRDFYIVL HHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTMPFCIAMHEISAYCGHPSNFLVEALAVLGFLYFLRLCAKLGW HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA