The gene/protein map for NC_008229 is currently unavailable.
Definition Helicobacter acinonychis str. Sheeba chromosome, complete genome.
Accession NC_008229
Length 1,553,927

Click here to switch to the map view.

The map label for this gene is 109946785

Identifier: 109946785

GI number: 109946785

Start: 138736

End: 140208

Strand: Direct

Name: 109946785

Synonym: Hac_0162

Alternate gene names: NA

Gene position: 138736-140208 (Clockwise)

Preceding gene: 109946784

Following gene: 109946786

Centisome position: 8.93

GC content: 37.68

Gene sequence:

>1473_bases
ATGAATTGGCTTAAAGGTTGTAGTTTGAGTGTGTGTGCGTTAATGCTTATTGTAGGGTGTGCGAATAATCCTAGTCATAG
CGGATCGTTTGGGTCGTCTAAGGCTAAAAAAGTTAAAAAAATTGAAGATGGTTTTAACAAGTTCGAGCAAGCTTATTATA
ATAAAGATTTTAAGAGTGCTCATGAAATTTCACAAAATTTGATTGAGACGGACAAGCATCAGCATGACGCCCTTTTGTGG
AAATTGCAAAGTGGGGTGAATGCGTTTGAGATGAATGATTACAAGCAGTCTATCACAAATTTAGAAGATGTGAATACGAG
CTTTGACAATAAATTCAAAGACGGGACGACTGTGGGTGGCAAGGTATTGGCTTCTACGGTGGGGAATGAAAAGAATATCC
CTTATAAGGGGAATGTGTATGAATGGGTGTTGGCTAATTATTATTTAGCGTTAGATTATGCGTTTTTAAATGATATAGAT
AAGGCTAGAGTGTTTTTTAATCAAACGGCTGAGCGCCAAAGAAGAGCCAAAGACTATTTTGCTAAAGAGATCGCACAAGA
GCAAGAAGATATCAAAAAACAAGAAAAAGAAGCTAAATCTAAGTCTAAAGGCAAAAAGGAAGTTTCTGCTCAATTTTTAG
GTTCTCTTAATAATTTAACAAACAAATACAAAAGCTTGGAATTAATGAAGGGCTATGAAAACTTTTCTAACCCTTTAGTG
AATTATGTTTCAGGGATATTCTACCTTTTGAATAACGATAAAGATAAGGCTGAAGGCTATTTGAAAGAAGCGTTTGCAAT
CAGCCATGCTAAGGTTGTGGGCGAAGATTTAGCGGGTGTGAATAAAGCAAGGAATGTAAAAACCACTTGGGTGATTGTTG
AAGATGGCGAACAGCCTTTATTGGAAGAAGTGGCTGATAAGGACTTGTATTTTGCGATGCCTTATTTGAAAGATGAAGGC
AATGGGACTGATTTCAAGCAAAAATATAGCCTTAATGGTAAAGATTTGGAAGTTTTGAGTAACTTTAATGAGGTCATCAA
AGCCGAATTCAACCACAAGCTCCCTAGCATCACGGCGAGAGCGGTTAGTGCGGCTGTGACTAAAAACCTTTTATCAAGGG
GAGTTGAAGAGGCAGGTAAGGTTACTGAGGCGGCTTCAGGTAGTGCTGCAGGTCAGATGGCTAGCATGGGGTTAAAAATG
TTTGGTAAAGCTATGAAAATGGTTAATGCCCATACCACGCAAGCAGATACCAGAAGCTCAAGCGTGTTCCCTAATAAAAT
TTATGCCGCTAAATTAAAAGCGAGCGAATTGGGGGTTTTGAACGCTGATGGAATGAAATTATTGGATCTAAATCCTACAA
AATGTGAAAAAACAGACGCACAAAATGGTAAAATTTGCAGTAACACTAATAACATTGTGTTTATTAGGACTTTGAAAACA
GGAACGAGCGTTTCTATTTTAAACTTAAAGTAG

Upstream 100 bases:

>100_bases
GTTTTTTTTTTTTTATAATTTTCAAATGATTAAGATGCGTTTTAATTTTGTTGTTATATAATCAAGCTCAAATTTATTTT
ATTTTCAAGGAGTTTTAGCA

Downstream 100 bases:

>100_bases
GAGTTTTATTTTATGGCATTACAAACAAAATTAAAAGTTATAGGATCAGTGGTTTTAGGCGCGTTATTGTGGGTGGGCTG
TTCAGGGGGAGCAGTGAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 490; Mature: 490

Protein sequence:

>490_residues
MNWLKGCSLSVCALMLIVGCANNPSHSGSFGSSKAKKVKKIEDGFNKFEQAYYNKDFKSAHEISQNLIETDKHQHDALLW
KLQSGVNAFEMNDYKQSITNLEDVNTSFDNKFKDGTTVGGKVLASTVGNEKNIPYKGNVYEWVLANYYLALDYAFLNDID
KARVFFNQTAERQRRAKDYFAKEIAQEQEDIKKQEKEAKSKSKGKKEVSAQFLGSLNNLTNKYKSLELMKGYENFSNPLV
NYVSGIFYLLNNDKDKAEGYLKEAFAISHAKVVGEDLAGVNKARNVKTTWVIVEDGEQPLLEEVADKDLYFAMPYLKDEG
NGTDFKQKYSLNGKDLEVLSNFNEVIKAEFNHKLPSITARAVSAAVTKNLLSRGVEEAGKVTEAASGSAAGQMASMGLKM
FGKAMKMVNAHTTQADTRSSSVFPNKIYAAKLKASELGVLNADGMKLLDLNPTKCEKTDAQNGKICSNTNNIVFIRTLKT
GTSVSILNLK

Sequences:

>Translated_490_residues
MNWLKGCSLSVCALMLIVGCANNPSHSGSFGSSKAKKVKKIEDGFNKFEQAYYNKDFKSAHEISQNLIETDKHQHDALLW
KLQSGVNAFEMNDYKQSITNLEDVNTSFDNKFKDGTTVGGKVLASTVGNEKNIPYKGNVYEWVLANYYLALDYAFLNDID
KARVFFNQTAERQRRAKDYFAKEIAQEQEDIKKQEKEAKSKSKGKKEVSAQFLGSLNNLTNKYKSLELMKGYENFSNPLV
NYVSGIFYLLNNDKDKAEGYLKEAFAISHAKVVGEDLAGVNKARNVKTTWVIVEDGEQPLLEEVADKDLYFAMPYLKDEG
NGTDFKQKYSLNGKDLEVLSNFNEVIKAEFNHKLPSITARAVSAAVTKNLLSRGVEEAGKVTEAASGSAAGQMASMGLKM
FGKAMKMVNAHTTQADTRSSSVFPNKIYAAKLKASELGVLNADGMKLLDLNPTKCEKTDAQNGKICSNTNNIVFIRTLKT
GTSVSILNLK
>Mature_490_residues
MNWLKGCSLSVCALMLIVGCANNPSHSGSFGSSKAKKVKKIEDGFNKFEQAYYNKDFKSAHEISQNLIETDKHQHDALLW
KLQSGVNAFEMNDYKQSITNLEDVNTSFDNKFKDGTTVGGKVLASTVGNEKNIPYKGNVYEWVLANYYLALDYAFLNDID
KARVFFNQTAERQRRAKDYFAKEIAQEQEDIKKQEKEAKSKSKGKKEVSAQFLGSLNNLTNKYKSLELMKGYENFSNPLV
NYVSGIFYLLNNDKDKAEGYLKEAFAISHAKVVGEDLAGVNKARNVKTTWVIVEDGEQPLLEEVADKDLYFAMPYLKDEG
NGTDFKQKYSLNGKDLEVLSNFNEVIKAEFNHKLPSITARAVSAAVTKNLLSRGVEEAGKVTEAASGSAAGQMASMGLKM
FGKAMKMVNAHTTQADTRSSSVFPNKIYAAKLKASELGVLNADGMKLLDLNPTKCEKTDAQNGKICSNTNNIVFIRTLKT
GTSVSILNLK

Specific function: Unknown

COG id: COG3014

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54355; Mature: 54355

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCEEEEEECC
>Mature Secondary Structure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CCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA