| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
Click here to switch to the map view.
The map label for this gene is ccpA [H]
Identifier: 109946746
GI number: 109946746
Start: 112333
End: 113385
Strand: Reverse
Name: ccpA [H]
Synonym: Hac_0123
Alternate gene names: 109946746
Gene position: 113385-112333 (Counterclockwise)
Preceding gene: 109946756
Following gene: 109946744
Centisome position: 7.3
GC content: 41.6
Gene sequence:
>1053_bases ATGAAAAAATCCATTTTATTGAGCGTTTGCTTGGCTTTTTCTTGCATTCACGCTTTAAGCGATATGGATCTCATCAAAAA AGCGAAAGAAAGCCATCTAGAACCCATGCCTATGGGCAAGGAGCTCAAAGAATACCAGATCAAAAAAACTAAAGATGTGG GTATTGGTGCTAAAAAAAGCGAGATTATGACCCCCGCTCAAGTGGAATTAGGCAAAATGCTCTATTTTGACCCTAGGATT TCTACTTCCTATCTTGTGTCTTGTAACACATGCCATAATCTAGGCTTAGGCGGAGTGGATCTAGTCCCAAGTGCAGTAGG CTCTCAATGGAGGAAAAACCCCCACCTTTTAAGCTCCCCAACGGTGTATAACTCTGTCTTTAATGATGTGCAGTTTTGGG ATGGTAGGGTTACGCATTTAAACGAGCAGGCGCAAGGGCCTATCCAGTCTTCTTTTGAAATGGGGGCTGACCCAAAAGTC GTGGTAGAAAAAATCAATTCCATGCCAGGCTATGTCAAACTCTTTAGAAAAGCTTATGGCTCTAAAGTCAAAATTGACTT TAAATTGATCGCAGATAGTATCGCTATGTTTGAAGCCACGCTCATTACCCCAAGCCGCTATGATGATTTTTTAAGGGGCA ATCCTAAAGCACTCAGTAAAGCCGAACAAGAAGGGCTGGATTTATTCATTTCTAAAGGCTGTGTGGCTTGCCATAATGGG ATCAATCTTGGCGGATCGATGCAACCTCTTGGGGTGGTCAAACCTTATAAATTCGCTAATGTGGGCGATTTCAAAGGCGA TAAAAACGGGCTTGTGAAAGTGCCTACTTTAAGGAATATCACCGAAACGATGCCTTATTTTCATAACGGACAATTTTGGG ATGTCAAAGATGCGATCAAAGAAATGGGCTCTATCCAGTTAGGCATTCAAATCAGCGATACAGAAGCGCAAAAGATTGAA ACTTTCTTTGAAGCCTTAAAGGGTAAAAAACCTAAAATAATCTACCCAGAACTCCCTGTGATGACAGACAAAACCCCTAA ACCCTCTTTTTAA
Upstream 100 bases:
>100_bases CCCTTTATTCTTATTAAGTCAATTTAATGATAATTATTGTATAATGATGCTTATAATGAGAAAATATTTCTTATTATGAT GCTATATTAAGGAGTTCATC
Downstream 100 bases:
>100_bases CTTTTAAAAAGTCCCTTTTAAGGGGGCTTGATTATAAAAAGCTAGGGTCATTACAAGACTTGATATAAGTTTTTTGTTAA TGAAAATTCTCTAAACGATC
Product: cytochrome c551 peroxidase
Products: NA
Alternate protein names: CCP; Cytochrome c peroxidase [H]
Number of amino acids: Translated: 350; Mature: 350
Protein sequence:
>350_residues MKKSILLSVCLAFSCIHALSDMDLIKKAKESHLEPMPMGKELKEYQIKKTKDVGIGAKKSEIMTPAQVELGKMLYFDPRI STSYLVSCNTCHNLGLGGVDLVPSAVGSQWRKNPHLLSSPTVYNSVFNDVQFWDGRVTHLNEQAQGPIQSSFEMGADPKV VVEKINSMPGYVKLFRKAYGSKVKIDFKLIADSIAMFEATLITPSRYDDFLRGNPKALSKAEQEGLDLFISKGCVACHNG INLGGSMQPLGVVKPYKFANVGDFKGDKNGLVKVPTLRNITETMPYFHNGQFWDVKDAIKEMGSIQLGIQISDTEAQKIE TFFEALKGKKPKIIYPELPVMTDKTPKPSF
Sequences:
>Translated_350_residues MKKSILLSVCLAFSCIHALSDMDLIKKAKESHLEPMPMGKELKEYQIKKTKDVGIGAKKSEIMTPAQVELGKMLYFDPRI STSYLVSCNTCHNLGLGGVDLVPSAVGSQWRKNPHLLSSPTVYNSVFNDVQFWDGRVTHLNEQAQGPIQSSFEMGADPKV VVEKINSMPGYVKLFRKAYGSKVKIDFKLIADSIAMFEATLITPSRYDDFLRGNPKALSKAEQEGLDLFISKGCVACHNG INLGGSMQPLGVVKPYKFANVGDFKGDKNGLVKVPTLRNITETMPYFHNGQFWDVKDAIKEMGSIQLGIQISDTEAQKIE TFFEALKGKKPKIIYPELPVMTDKTPKPSF >Mature_350_residues MKKSILLSVCLAFSCIHALSDMDLIKKAKESHLEPMPMGKELKEYQIKKTKDVGIGAKKSEIMTPAQVELGKMLYFDPRI STSYLVSCNTCHNLGLGGVDLVPSAVGSQWRKNPHLLSSPTVYNSVFNDVQFWDGRVTHLNEQAQGPIQSSFEMGADPKV VVEKINSMPGYVKLFRKAYGSKVKIDFKLIADSIAMFEATLITPSRYDDFLRGNPKALSKAEQEGLDLFISKGCVACHNG INLGGSMQPLGVVKPYKFANVGDFKGDKNGLVKVPTLRNITETMPYFHNGQFWDVKDAIKEMGSIQLGIQISDTEAQKIE TFFEALKGKKPKIIYPELPVMTDKTPKPSF
Specific function: Catalyzes the peroxidative oxidation of azurin and cytochrome c551. Likely to provide protection against toxic peroxides [H]
COG id: COG1858
COG function: function code P; Cytochrome c peroxidase
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789935, Length=290, Percent_Identity=37.9310344827586, Blast_Score=167, Evalue=8e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009056 - InterPro: IPR003088 - InterPro: IPR004852 [H]
Pfam domain/function: PF03150 CCP_MauG; PF00034 Cytochrom_C [H]
EC number: =1.11.1.5 [H]
Molecular weight: Translated: 38821; Mature: 38821
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51007 CYTC L=RR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSILLSVCLAFSCIHALSDMDLIKKAKESHLEPMPMGKELKEYQIKKTKDVGIGAKKS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCHH EIMTPAQVELGKMLYFDPRISTSYLVSCNTCHNLGLGGVDLVPSAVGSQWRKNPHLLSSP HCCCCHHHHHCCEEEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC TVYNSVFNDVQFWDGRVTHLNEQAQGPIQSSFEMGADPKVVVEKINSMPGYVKLFRKAYG HHHHHHHHHHHHCCCEEEECCHHHCCCCHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHCC SKVKIDFKLIADSIAMFEATLITPSRYDDFLRGNPKALSKAEQEGLDLFISKGCVACHNG CEEEEEHHHHHHHHHHHHHEECCCHHHHHHHCCCHHHHHHHHHHCCCEEECCCCCEECCC INLGGSMQPLGVVKPYKFANVGDFKGDKNGLVKVPTLRNITETMPYFHNGQFWDVKDAIK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHCCCCCCCCEECHHHHHH EMGSIQLGIQISDTEAQKIETFFEALKGKKPKIIYPELPVMTDKTPKPSF HCCCEEEEEEECCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MKKSILLSVCLAFSCIHALSDMDLIKKAKESHLEPMPMGKELKEYQIKKTKDVGIGAKKS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCHH EIMTPAQVELGKMLYFDPRISTSYLVSCNTCHNLGLGGVDLVPSAVGSQWRKNPHLLSSP HCCCCHHHHHCCEEEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC TVYNSVFNDVQFWDGRVTHLNEQAQGPIQSSFEMGADPKVVVEKINSMPGYVKLFRKAYG HHHHHHHHHHHHCCCEEEECCHHHCCCCHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHCC SKVKIDFKLIADSIAMFEATLITPSRYDDFLRGNPKALSKAEQEGLDLFISKGCVACHNG CEEEEEHHHHHHHHHHHHHEECCCHHHHHHHCCCHHHHHHHHHHCCCEEECCCCCEECCC INLGGSMQPLGVVKPYKFANVGDFKGDKNGLVKVPTLRNITETMPYFHNGQFWDVKDAIK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHCCCCCCCCEECHHHHHH EMGSIQLGIQISDTEAQKIETFFEALKGKKPKIIYPELPVMTDKTPKPSF HCCCEEEEEEECCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7781769; 10984043; 8543038; 2546794; 3030432; 1657179; 8591033 [H]