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The map label for this gene is DDEM fragment 1

Identifier: 109946723

GI number: 109946723

Start: 87983

End: 88228

Strand: Reverse

Name: DDEM fragment 1

Synonym: Hac_0094

Alternate gene names: NA

Gene position: 88228-87983 (Counterclockwise)

Preceding gene: 109946725

Following gene: 109946722

Centisome position: 5.68

GC content: 37.4

Gene sequence:

>246_bases
ATGAATTATAAAATCTTAGATTTGTTTTGTGGGGCTGGAGGTTTTAGGGCTAGGTTAGAGCGTTTAAAGGAGTTTAGCCC
TTTAATAGGGCTAGATTGCGGTAAGCAAGCCTTGAATACTTTTAAAAACAACCATAAAAACGCTATGGGTATTTGTGGGG
ACATCACTCAAGCCGACATTAAAGAAAAAGTTATAGAGTTGGCTAAAAAACTAGAAATCAACATGATCATTGGTGGGTCT
CCCTAA

Upstream 100 bases:

>100_bases
GCACTTAAGACTTTTAAAAACACGCCTTATTAACAACATTCTAATCCCTTTAAACAAAAACTAATGAGCGCTATTTTATA
ATCTTTTTAAAAAACTTAAA

Downstream 100 bases:

>100_bases
TCAAGGCTTTTCTAATTAAAGGGAAAAAATTTAGGGCTAAAAGACCCTAGAAATTTCTTATTCTTAGGATATTATAGAAA
TAGTGAAAGCCATAAAACTA

Product: cytosine specific DNA methyltransferase fragment 1

Products: S-adenosyl-L-homocysteine; DNA containing 5-methylcytosine

Alternate protein names: DNA-Methyltransferase; Methylase

Number of amino acids: Translated: 81; Mature: 81

Protein sequence:

>81_residues
MNYKILDLFCGAGGFRARLERLKEFSPLIGLDCGKQALNTFKNNHKNAMGICGDITQADIKEKVIELAKKLEINMIIGGS
P

Sequences:

>Translated_81_residues
MNYKILDLFCGAGGFRARLERLKEFSPLIGLDCGKQALNTFKNNHKNAMGICGDITQADIKEKVIELAKKLEINMIIGGS
P
>Mature_81_residues
MNYKILDLFCGAGGFRARLERLKEFSPLIGLDCGKQALNTFKNNHKNAMGICGDITQADIKEKVIELAKKLEINMIIGGS
P

Specific function: Unknown

COG id: COG0270

COG function: function code L; Site-specific DNA methylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.1.1.37

Molecular weight: Translated: 8926; Mature: 8926

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYKILDLFCGAGGFRARLERLKEFSPLIGLDCGKQALNTFKNNHKNAMGICGDITQADI
CCCEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHH
KEKVIELAKKLEINMIIGGSP
HHHHHHHHHHHEEEEEECCCC
>Mature Secondary Structure
MNYKILDLFCGAGGFRARLERLKEFSPLIGLDCGKQALNTFKNNHKNAMGICGDITQADI
CCCEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHH
KEKVIELAKKLEINMIIGGSP
HHHHHHHHHHHEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: S-adenosyl-L-methionine; DNA

Specific reaction: S-adenosyl-L-methionine + DNA = S-adenosyl-L-homocysteine + DNA containing 5-methylcytosine

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA