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The map label for this gene is DDEM fragment 4

Identifier: 109946720

GI number: 109946720

Start: 87152

End: 87319

Strand: Reverse

Name: DDEM fragment 4

Synonym: Hac_0091

Alternate gene names: NA

Gene position: 87319-87152 (Counterclockwise)

Preceding gene: 109946721

Following gene: 109946719

Centisome position: 5.62

GC content: 38.69

Gene sequence:

>168_bases
TTGCACCGCTCTATCACGCCCAGAGAAGCTACTAGGATACAAAGCTTTAGCCATACTTATATTTTTTATGGCAATAAAAC
AAGTATTTGCAAGCAAATCGGTAACGCTGTGCCTCCTCTTTTAGCCCTAGCTTTAGGCAAAGCGATCTTAAAAAGCTTAA
AAAAATGA

Upstream 100 bases:

>100_bases
CAATTTAAAGCACATGGGGCGTTTGAGTTGGAAGAAAATAAGCCCCACCATAGACACAAGGTTTGACACTCCAAACAATG
GCACCAACTCCCACTCCGAA

Downstream 100 bases:

>100_bases
TACAAATTCATCACGCTAACGCCTTTGAAATCATCAAGGATTCCCGCCAACAAAATTTAAAAGTGGATGCGATTATCACA
GACCCTCCTTATAATATTTC

Product: cytosine specific DNA methyltransferase fragment 4

Products: S-adenosyl-L-homocysteine; DNA containing 5-methylcytosine

Alternate protein names: Cytosine Specific DNA Methyltransferase; DNA-Methyltransferase

Number of amino acids: Translated: 55; Mature: 55

Protein sequence:

>55_residues
MHRSITPREATRIQSFSHTYIFYGNKTSICKQIGNAVPPLLALALGKAILKSLKK

Sequences:

>Translated_55_residues
MHRSITPREATRIQSFSHTYIFYGNKTSICKQIGNAVPPLLALALGKAILKSLKK
>Mature_55_residues
MHRSITPREATRIQSFSHTYIFYGNKTSICKQIGNAVPPLLALALGKAILKSLKK

Specific function: Unknown

COG id: COG0270

COG function: function code L; Site-specific DNA methylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.1.1.37

Molecular weight: Translated: 6113; Mature: 6113

Theoretical pI: Translated: 11.12; Mature: 11.12

Prosite motif: PS00095 C5_MTASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRSITPREATRIQSFSHTYIFYGNKTSICKQIGNAVPPLLALALGKAILKSLKK
CCCCCCCHHHHHHHCCCCEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHRSITPREATRIQSFSHTYIFYGNKTSICKQIGNAVPPLLALALGKAILKSLKK
CCCCCCCHHHHHHHCCCCEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: S-adenosyl-L-methionine; DNA

Specific reaction: S-adenosyl-L-methionine + DNA = S-adenosyl-L-homocysteine + DNA containing 5-methylcytosine

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA