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The map label for this gene is hypE [H]

Identifier: 109946714

GI number: 109946714

Start: 82141

End: 83139

Strand: Reverse

Name: hypE [H]

Synonym: Hac_0082

Alternate gene names: 109946714

Gene position: 83139-82141 (Counterclockwise)

Preceding gene: 109946715

Following gene: 109946709

Centisome position: 5.35

GC content: 40.24

Gene sequence:

>999_bases
ATGGAAAGCGTGACTCTAGCATGCGGGAATGGTGGGAAAGAAACAAACGCTTTAATTGAGCGAGTTTTTATGCCCTATTT
AAAAGAGTTGATCAGTGCATTTGGTGAAGACGCCCCTAAATTTGAAGCCAATGGGGAATATTGCGTGAGCACGGATAGTT
TTGTCATCACGCCTTTAACTTTTAATGGGGGTGATATAGGCAAGCTTTGTGTTTGCGGGAGTGCGAATGATGTGAGCATG
CAAGGGGGCAAACCTTTGTATTTGAATATCGGTTTTATTTTAGAAGAAGGTTTAGAAATCGCTCTTTTAAAACAAATTCT
ACAATCCATGCAAAAAGAGTTGTTTAAAGCCAACCTCAAACTCCTCTCCCTAGACACTAAAGTCGTGCCAAAGGGGAGCG
TGGATAAGCTTTTTATTAACACGACTTGTATTGGTAAAATCATAAAAACAGGGATTTCTTCACACCATTTAAAACAAGGG
CAAGCCATTATCGTGAGCGATACTATCGCTAATCATGGGGCAAGCCTGTTTGCGATGCGTAATGAAATCAAGCTTAAAAC
TAATCTTAAAAGCGATTGCCAACTGCTCTATCCTTTAGTAAGACCCCTATTTTTAAGCAATCTAAAAATCCATGCTTTAA
GAGATGCGACTAGGGGTGGGTTAGCGAGCGTGTTAAACGAATGGGCGAATAGCTCAAAAGTAAAAATCGTCATAGAAGAA
GAAAAAATCCCCTTAAAAGAAGAAACTAAAGGGATTTGTGAGATTTTAGGGCTAGAACCTTATGCGTTAGCTAATGAGGG
GGTGTTTGTTTTAGCACTCAATCAAAAAGACGCCCCCAAAGCCTTAGAAATTTTAAAAAGTAATGAACAAGCCAAAAACG
CTTGCATGATCGGCGAAGTGCTTGAAAGCCCTTATCCTATCGTGGTTTTAAAGAACGCATGGGGTTTTGAAAGGATCTTA
GAAATGCCAGAAGGCGAGCTGTTGCCTAGGATTTGCTAA

Upstream 100 bases:

>100_bases
ATTTTTTCCACAAACATTTCCCCCCTAACGATAGCAGTATTGCTGTCGGTCAAGCCTTAATGGCGTATTTTAACCCTACA
ATCATCAAGAAAGGATAAAA

Downstream 100 bases:

>100_bases
CGCACTCATTTTTTAATCGTTTTTGATGTATTTTAAGTTTGTTTTATTTAGAACGCAAGAGAGGGTTTTAAGGGTTTATG
AGTCGTTTTAATCGGATTTT

Product: hydrogenase expression/formation protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MESVTLACGNGGKETNALIERVFMPYLKELISAFGEDAPKFEANGEYCVSTDSFVITPLTFNGGDIGKLCVCGSANDVSM
QGGKPLYLNIGFILEEGLEIALLKQILQSMQKELFKANLKLLSLDTKVVPKGSVDKLFINTTCIGKIIKTGISSHHLKQG
QAIIVSDTIANHGASLFAMRNEIKLKTNLKSDCQLLYPLVRPLFLSNLKIHALRDATRGGLASVLNEWANSSKVKIVIEE
EKIPLKEETKGICEILGLEPYALANEGVFVLALNQKDAPKALEILKSNEQAKNACMIGEVLESPYPIVVLKNAWGFERIL
EMPEGELLPRIC

Sequences:

>Translated_332_residues
MESVTLACGNGGKETNALIERVFMPYLKELISAFGEDAPKFEANGEYCVSTDSFVITPLTFNGGDIGKLCVCGSANDVSM
QGGKPLYLNIGFILEEGLEIALLKQILQSMQKELFKANLKLLSLDTKVVPKGSVDKLFINTTCIGKIIKTGISSHHLKQG
QAIIVSDTIANHGASLFAMRNEIKLKTNLKSDCQLLYPLVRPLFLSNLKIHALRDATRGGLASVLNEWANSSKVKIVIEE
EKIPLKEETKGICEILGLEPYALANEGVFVLALNQKDAPKALEILKSNEQAKNACMIGEVLESPYPIVVLKNAWGFERIL
EMPEGELLPRIC
>Mature_332_residues
MESVTLACGNGGKETNALIERVFMPYLKELISAFGEDAPKFEANGEYCVSTDSFVITPLTFNGGDIGKLCVCGSANDVSM
QGGKPLYLNIGFILEEGLEIALLKQILQSMQKELFKANLKLLSLDTKVVPKGSVDKLFINTTCIGKIIKTGISSHHLKQG
QAIIVSDTIANHGASLFAMRNEIKLKTNLKSDCQLLYPLVRPLFLSNLKIHALRDATRGGLASVLNEWANSSKVKIVIEE
EKIPLKEETKGICEILGLEPYALANEGVFVLALNQKDAPKALEILKSNEQAKNACMIGEVLESPYPIVVLKNAWGFERIL
EMPEGELLPRIC

Specific function: Unknown

COG id: COG0309

COG function: function code O; Hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hypE family [H]

Homologues:

Organism=Escherichia coli, GI226510967, Length=339, Percent_Identity=41.0029498525074, Blast_Score=245, Evalue=3e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000728
- InterPro:   IPR010918
- InterPro:   IPR011854
- InterPro:   IPR016188 [H]

Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]

EC number: NA

Molecular weight: Translated: 36307; Mature: 36307

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESVTLACGNGGKETNALIERVFMPYLKELISAFGEDAPKFEANGEYCVSTDSFVITPLT
CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCEEEEEEE
FNGGDIGKLCVCGSANDVSMQGGKPLYLNIGFILEEGLEIALLKQILQSMQKELFKANLK
ECCCCCCEEEEECCCCCCCCCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHCCCE
LLSLDTKVVPKGSVDKLFINTTCIGKIIKTGISSHHLKQGQAIIVSDTIANHGASLFAMR
EEEECCEECCCCCCCEEEEEHHHHHHHHHHCCCHHHHCCCCEEEEECCHHHCCCEEEEEC
NEIKLKTNLKSDCQLLYPLVRPLFLSNLKIHALRDATRGGLASVLNEWANSSKVKIVIEE
CCEEEECCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHCCCCEEEEEEEC
EKIPLKEETKGICEILGLEPYALANEGVFVLALNQKDAPKALEILKSNEQAKNACMIGEV
CCCCCHHHHHHHHHHHCCCCEEECCCCEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHH
LESPYPIVVLKNAWGFERILEMPEGELLPRIC
HCCCCCEEEEECCCCHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MESVTLACGNGGKETNALIERVFMPYLKELISAFGEDAPKFEANGEYCVSTDSFVITPLT
CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCEEEEEEE
FNGGDIGKLCVCGSANDVSMQGGKPLYLNIGFILEEGLEIALLKQILQSMQKELFKANLK
ECCCCCCEEEEECCCCCCCCCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHCCCE
LLSLDTKVVPKGSVDKLFINTTCIGKIIKTGISSHHLKQGQAIIVSDTIANHGASLFAMR
EEEECCEECCCCCCCEEEEEHHHHHHHHHHCCCHHHHCCCCEEEEECCHHHCCCEEEEEC
NEIKLKTNLKSDCQLLYPLVRPLFLSNLKIHALRDATRGGLASVLNEWANSSKVKIVIEE
CCEEEECCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHCCCCEEEEEEEC
EKIPLKEETKGICEILGLEPYALANEGVFVLALNQKDAPKALEILKSNEQAKNACMIGEV
CCCCCHHHHHHHHHHHCCCCEEECCCCEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHH
LESPYPIVVLKNAWGFERILEMPEGELLPRIC
HCCCCCEEEEECCCCHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8497190 [H]