Definition Pseudoalteromonas atlantica T6c chromosome, complete genome.
Accession NC_008228
Length 5,187,005

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Identifier: 109899696

GI number:

Start: 4065656

End: 4066933

Strand: Direct

Name: Not Available

Synonym: Patl_3391

Alternate gene names: NA

Gene position: NA

Preceding gene: 109899695

Following gene: 109899698

Centisome position: NA

GC content: NA

Gene sequence:

>1278_bases
ATGACTAAACTCAATAGCGCACTGCTCTTGGCTTTATTGGCTTCAATTTTTGCTAACGTTTATCAGTACCTAAACGGCCA
CGAACAAGTACCCGTGCCCCAGTCAGAACAGAGTCAAATTGAATCACGCCGATCTGATGCCCTAGCGCACCAGCAAAGTA
AAGACACCCAGCAGCTAAATGAACAGCTAAGTGAGCAGCTAAATCAAGACACTCAACCTCACTTTTCTCAAACGCCCAAC
GTACATGAACCAAGCATTGAAACCGATTCAAGAGTAACAAAGAAACCAACCACACCAGCAAGCGCTGAAATGCAACGCGG
AGTACCAAACACGACACGCTTCAAACCAGATAGGCGTGTAGCCTATTTGGCCCAAACTCGGCGCTGGCTTGCGGCGCAGG
AGTACGCCAAATTAGATGCCTTTTTCCCACTATATCTACGCCAATACCCACAAGATGTTGAGTTTTTGTTGCTAGAAGCC
GAATATATTGCACATACGCATTTGCTCAGTGATGCCATCATTCATTACCACGGCATGCTCAGTTTACCCTTGAGCCATGC
ACAGCAAACTCAGGTGCAAAACACCATTTCGCGCTTAACCAATGAAACCATCAACCAGTTAAAACAGACCTACTCATGGG
ATATATTGGCGCAATTTGCTGAGCCCTTACTACAAGTAAGCCCCACCAGCCGTGAATTAATATTAGCGTTAGCCACAGCG
TACGCACACCAGCAGCAAGCGGGGTTAATGGAAAACACCTTAGCCTCTATTCGCTATGAAGACCCTCAAGCCATGCAGAT
ACGCGGAATTATTCAACAATACGATGACGAGGTGAACGCACAAAGCGATAGAGCCACCAAAACAACTAACGACAATCCAC
GCAAGAATGTCCCCGCAGGTGTTACGTCAATAGGATTACAAAAATATGGCGATCAGTACGTAGTTGAAAGCCGCTTAAGC
GGCAATCAAGTCCACTTTTTAATTGATACGGGCGCATCCACTACCACCATTTCAAGACAAAAATTCAAAACACTATTTAA
ATCAGTCGCCACTAAATTTGTTGGCCAATTTAACGTGCAAACTGCCAATGGCACCGTACGCTCCCCTATGTACCAATTCG
CTAGCCTGGAAATTGCAAAGGCGAAAGTAAAAAACATCAACGTGATGGTATTGCCACTCGATGAGCTAGGTCACAGCGAT
GGCTTATTAGGAATGAATTTTTTACGAGAGTTTGATTTTAGAATAGATCAAAAAAATGCCCTGCTGCATCTGCAATAG

Upstream 100 bases:

>100_bases
GCATTAAGTTCCGGTAAGCCAAAGCGCATGCCCAAGGTATTCTGCGATACCTACTTTAATGCCATGCTGGCGTCTCAAAC
AGAGTGAAGGCATCAATGTC

Downstream 100 bases:

>100_bases
GCGCCTTTCCTTAAGCGCCGCTGCTGAAGATAGTAAGCTGTGCTATTTATATTAATGAGGTTAAAAGCTGTTGTCAGTTA
TCTGACGGGAAATAGGTAAG

Product: putative peptidase A2A

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>425_residues
MTKLNSALLLALLASIFANVYQYLNGHEQVPVPQSEQSQIESRRSDALAHQQSKDTQQLNEQLSEQLNQDTQPHFSQTPN
VHEPSIETDSRVTKKPTTPASAEMQRGVPNTTRFKPDRRVAYLAQTRRWLAAQEYAKLDAFFPLYLRQYPQDVEFLLLEA
EYIAHTHLLSDAIIHYHGMLSLPLSHAQQTQVQNTISRLTNETINQLKQTYSWDILAQFAEPLLQVSPTSRELILALATA
YAHQQQAGLMENTLASIRYEDPQAMQIRGIIQQYDDEVNAQSDRATKTTNDNPRKNVPAGVTSIGLQKYGDQYVVESRLS
GNQVHFLIDTGASTTTISRQKFKTLFKSVATKFVGQFNVQTANGTVRSPMYQFASLEIAKAKVKNINVMVLPLDELGHSD
GLLGMNFLREFDFRIDQKNALLHLQ

Sequences:
NA

Specific function: NA

COG id: COG3577

COG function: function code R; Predicted aspartyl protease

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA