Definition Pseudoalteromonas atlantica T6c chromosome, complete genome.
Accession NC_008228
Length 5,187,005

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Identifier: 109899128

GI number:

Start: 3419195

End: 3421357

Strand: Direct

Name: Not Available

Synonym: Patl_2818

Alternate gene names: NA

Gene position: NA

Preceding gene: 109899127

Following gene: 109899130

Centisome position: NA

GC content: NA

Gene sequence:

>2163_bases
TTGGCAGCAAAGGCAGGCTTATCGATTCGCGCACGTTACATATTAGCCCTCTCATTAGTTGCCGCAACTGTCAGTGGTTC
AGCTCTGACCCTCAAATATATTTTCAACGCACAAGCTACTGATGCATATGTGATTAACGTAGCCGGTCAACAAAGGATGT
TGTCCCAACGGATAGCCCTTTCCATATATCGCCTATCAACTTGCCCTAATGATGAACTAACGGTTAGCGCTACCAAAAAC
ACCCTAAAAAGCGCGCTAAGTCAGTTTAAAGCCAACCATGTTTATTTAACTAATTTGCCTAATATTCCTCCCTCGATACA
CGACTTATACTATGGCGAGCACGCATTAGAATTGGCAAGCATGCGATATGCAGATGAAGCAAACACATTCCTAAATCTTG
ACTCCACTTGCATTGCTCCACCACATCACTTTGATGCACAAAATAGTGATGCATTACTATTGAGACTTGATCAGGCAGTA
AAGGCCTTTGAAGATGCCGCAACGGCCAGGGTTCAACGCGTTGAGAATATAGAAATGTTTTTATGGGGTTTCACTTTACT
GCTACTACTGTGTGAGGCCATATTTATTTTCAGACCGATGGAGCAACAAATCACGTTTGCGCTGGCATCGTTAAAAGACG
CTCTATCGGCATCTAAAAAAGCGCAAGCAGAAGCTATTGATGCAAGTAAAGCTAAATCGGAATTCCTTGCCAGCATGAGC
CACGAACTTCGCACGCCCATGAATGGTTTATTCGGTATGATGGAACTAGCCATTGATAATCCTCACAAAAGTGGGGAATA
TTTAAAGAAAGCTAAAAATGCCGGTAGGCAACTGTTAGTGTTGATCAATGACGTCCTTGATCTATCGAAAATTGAAGCAG
GTAAACTACGTATTGAGCGCACATCTGTAGATTTGTTACAACTGATGGACGACGTAACCTCTGTACAATCGGCTAATTGT
CGCTTAAAAAAATTAGCCTTTGATTATCAAAAACAAACCAATCTGCCTGCGTATATTGTGGGAGATCCTACTCGCATAGC
GCAAATTTTACACAACCTATTAAGTAACGCGATTAAGTTTACGCAACAAGGCACAGTGACCTTGAGAATTGGGGTGTTTG
TCACAGAGAAGCGCCACTGGTTAACAATCGATGTGCAAGACACAGGAATGGGCATCCCCCCTGAAAAGACACGAACTATA
TTCAATAAATTCGAACAAGCAGACCAATCAACTACCCGTATACACGGTGGCACGGGTCTAGGTTTATCTATCGCCAAACA
ACTGACTGACTTGATGGGCGGCAAATTAACCGTACAAAGCAAAGTGGACAAAGGCAGTTGCTTTACGTTTTCCGTACCGA
TAGAAATCGATGACAAACAGGTCGAAAATATTTATTCGAAACAAACATTACGCTGTGCAATTGTGGACGATCTACAAACC
AGTCGAGAGTATATTCAGCATATCGTCACGTCTTTAGGGTGCTTACCTAACACATTCGATAATGCAGAAGACTTCTTAGC
TAGCGATATATCTCAGTTCGACGTTTTGCTGCTTGACCTGTCGATGCCTGAAATAACCGGTGTGGATGTGGTCGAAACAC
TAAGAGATCGGCAATTAAGCAAGCTACCGCATATCATCATTGTATCGGCGGTCATAGAGCATCTTGACTGCTCTACATCT
GTACGTGATTTGATTTGGCGCACCCATGCAAAACCTATTGTAAGGCAAGAGTTAGAGAGCGACTTAAAGAAGCTGCAAAA
CTTCTATTCTCGCCAGCACACCTCTATCGAAGAGGAACAGCCAGAACATAAAATTCTGATCGTAGAAGACAACGAAATTA
ATGCAGAAGTGGTCAAAGTCATGCTTGAAGGCGCGGGCTATCAAATCGTTATTGCCACTGACGGCGAGAAAGCATTGCAG
GCCTGTATTTTCGAACAATATGACCTAATTTTGATGGATATGCACATGCCTGTAATGGATGGCATCACCGCTACTCAAAA
ATTAAGAAGGGAAATGAACTTTACGAATCCTATCATTGCTTTGTCAGCCAATGCGTTTGTCGAAGACAGAGAGCACTGCA
TAGAGGCTGGAATGAACGACTTTATTTCTAAACCTGTTGAGAAACAGGCCTTATTGGCCACCATTAAACGGCATATAAAG
TAA

Upstream 100 bases:

>100_bases
CGCTTTTATAACTCATGGACTTAAACGAACGATTTTGAGAACCTATGTGAAAGCGAACACCGCTTTCGCTTAAATAACAT
AGGCCACAGGAGCAAGGATT

Downstream 100 bases:

>100_bases
AATATGACTAGTTTATACTGGCGATGAAATTCGCCGTTTCCCCGTATGTACGTGGGAAACGGCAAGCAAACCAGAGTTGT
ACCTCATTTAAAGCAGCAGT

Product: periplasmic sensor hybrid histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>720_residues
MAAKAGLSIRARYILALSLVAATVSGSALTLKYIFNAQATDAYVINVAGQQRMLSQRIALSIYRLSTCPNDELTVSATKN
TLKSALSQFKANHVYLTNLPNIPPSIHDLYYGEHALELASMRYADEANTFLNLDSTCIAPPHHFDAQNSDALLLRLDQAV
KAFEDAATARVQRVENIEMFLWGFTLLLLLCEAIFIFRPMEQQITFALASLKDALSASKKAQAEAIDASKAKSEFLASMS
HELRTPMNGLFGMMELAIDNPHKSGEYLKKAKNAGRQLLVLINDVLDLSKIEAGKLRIERTSVDLLQLMDDVTSVQSANC
RLKKLAFDYQKQTNLPAYIVGDPTRIAQILHNLLSNAIKFTQQGTVTLRIGVFVTEKRHWLTIDVQDTGMGIPPEKTRTI
FNKFEQADQSTTRIHGGTGLGLSIAKQLTDLMGGKLTVQSKVDKGSCFTFSVPIEIDDKQVENIYSKQTLRCAIVDDLQT
SREYIQHIVTSLGCLPNTFDNAEDFLASDISQFDVLLLDLSMPEITGVDVVETLRDRQLSKLPHIIIVSAVIEHLDCSTS
VRDLIWRTHAKPIVRQELESDLKKLQNFYSRQHTSIEEEQPEHKILIVEDNEINAEVVKVMLEGAGYQIVIATDGEKALQ
ACIFEQYDLILMDMHMPVMDGITATQKLRREMNFTNPIIALSANAFVEDREHCIEAGMNDFISKPVEKQALLATIKRHIK

Sequences:
NA

Specific function: NA

COG id: NA

COG function: NA

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA