Definition Pseudoalteromonas atlantica T6c chromosome, complete genome.
Accession NC_008228
Length 5,187,005

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Identifier: 109898704

GI number:

Start: 2903830

End: 2905680

Strand: Direct

Name: Not Available

Synonym: Patl_2389

Alternate gene names: NA

Gene position: NA

Preceding gene: 109898698

Following gene: 109898705

Centisome position: NA

GC content: NA

Gene sequence:

>1851_bases
ATGCTTCAACATTCTGCTGATATCCACTACACCCTCAACGTTTCTTCTCTTGCCGGGCATATGCTAGACGTCTCATTACA
GATTAATATGCCCTCAAGTGATGGTCATGAACTGACGTTACCCGCTTGGATACCCGGCAGTTACATGATCAGGGATTTCG
CGAAAAATATCGTTGAAATATCCGCTCAAGACGCCCAAGGTCAGGCATTATCGATACATAAACTAGATAAACAAACTTGG
AAGCTGCCAGCAAACTCTGGCCCAATAACGGTAAATTACAGTGTTTACGCGTTTGATTTATCGGTACGCAGTGCTTACGT
ATTTGACGATTTTGCCTTTTTTAACGGCACAAGTACTTTCCTAGCGATCAAAGAGCACCGCGAAGCACCTGTGCTAGTGA
CCCTAATCAGGCCTGAACAGGCCCAATGTAAGCATTGGCGAGTGGCAACTACCTTGCCCCTTGCTAGAGCCACCGAGCAT
CACGATTTCGGGGACTACTGCGCTGACAATTACAACGACTTGATAGACCATCCCATTTTAATGGGAAATTACGATATCGT
GCCTTTTGACGTTGTTACCCCAGTCGCCAGCACCTCTTCACAACAAAGCGCTGAACATATCTGTCACTTTGAGTTAATTC
TGGCCGGCGGACACCGCAGCGATACCCAACGCATGGCAGCAGACTTGCGTAAACTCTGCGCCCATCATTTCACCTTATTC
GGCGATACGCCGCCCGTTGAGCGCTATCTGTTTATCACCATGCTAACAGGCAAAGATTTTGGCGGCCTTGAGCATATGTC
TTCTACAGCACTGCTTTACAGCAGAGATGATTTACCCAGTACCGCCCAAGCAGATCACATGCCTGATGGTTATCGTACTT
TTTTGAGTTTATGCAGCCACGAATTTCTGCATACTTGGCATGTAAAACGTACCAAACCCGCTGCGCTGCAGGCCAGCAAC
CTTAGTTATGAAGCGTATACTCCCCAACTATGGATTTACGAAGGCTTCACCAGTTACTACGACGATTTAAGCCTTACCCG
CAGCCATGTGACCAACAATGAAAGCTATTTAGAAGTATTAGGCCAAACGCTTACGCGTTTAGAGCGTAATGCGGGTCGCT
TTAAACAAACCGTCACAGCCTCAAGCTTTGACGCCTGGACCAAGTTCTATCAACAAGATGCTAGCGCCATCAACAACATT
GTCAGTTATTATGTCAAAGGGGCTGTTATCGCGCTGTGTCTTGATTTGCACATACGCGCGGCAAGTCAACACACCAAAAG
CTTAGACGATGTCATGCGTTACTTATGGCAGCACCATGGCAAAATGAATATAGGCACGCCGGATGACATTATTCAACATA
TCGTACTCAACGAAATGGGTTTACCACTCGCTGCGTTCCTGCAAGATGCATTGCACACAATCAAAGAGCTCCCGGTCAGC
CACCTATTGCATGACTTTGGGGTGACATTGCACAAGCGCCCACGTATTGATGCCAGCGATGCGGGTGGAAAGCCTGCTCC
TCGGGTCCAAAAAACTCAGTTTGGCGCAGCCTTTAAAGCTGCAGACACCGGGGTATTAGTGACCCAAGTTAGCGAAAATA
CGCCAGCCTATAACGCTGGACTACAAGTGGGCGATCAGCTGATCAGTTTTGATGACTGGCAAGTGTCCGCTGCAAACTTA
CTGACAATTTATAATCAATATGCTGCCAAAAGTAACGTGACGTTAACGGCTCTGCGTCACCAACGGCTTAAACAAATTGA
CCTCACCGTAGAAAATGCCTCGCTAGACACGATTTACTTGACCATATCGGATGCGCAAAAGTTGAAAAACTGGCTGCCTG
TGAGCAAATAA

Upstream 100 bases:

>100_bases
ACTTTAATATAAAGTGTTTTCGTAAAGATTCATCCTCAAATTGAATTTATTCAATGCGAATCGACTTCAGTCATCTCCAT
GTTTTTTAAGGTTTTAGTTC

Downstream 100 bases:

>100_bases
AACGCTGCCCTCATGGTGATGCTCCCCGTAAAGAGAACAGCAAAATCACCAAGAAGGGTAGTTAATCCTGGCCCCTGCAC
CACTTTTGTACATTTGACTG

Product: peptidase M61

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>616_residues
MLQHSADIHYTLNVSSLAGHMLDVSLQINMPSSDGHELTLPAWIPGSYMIRDFAKNIVEISAQDAQGQALSIHKLDKQTW
KLPANSGPITVNYSVYAFDLSVRSAYVFDDFAFFNGTSTFLAIKEHREAPVLVTLIRPEQAQCKHWRVATTLPLARATEH
HDFGDYCADNYNDLIDHPILMGNYDIVPFDVVTPVASTSSQQSAEHICHFELILAGGHRSDTQRMAADLRKLCAHHFTLF
GDTPPVERYLFITMLTGKDFGGLEHMSSTALLYSRDDLPSTAQADHMPDGYRTFLSLCSHEFLHTWHVKRTKPAALQASN
LSYEAYTPQLWIYEGFTSYYDDLSLTRSHVTNNESYLEVLGQTLTRLERNAGRFKQTVTASSFDAWTKFYQQDASAINNI
VSYYVKGAVIALCLDLHIRAASQHTKSLDDVMRYLWQHHGKMNIGTPDDIIQHIVLNEMGLPLAAFLQDALHTIKELPVS
HLLHDFGVTLHKRPRIDASDAGGKPAPRVQKTQFGAAFKAADTGVLVTQVSENTPAYNAGLQVGDQLISFDDWQVSAANL
LTIYNQYAAKSNVTLTALRHQRLKQIDLTVENASLDTIYLTISDAQKLKNWLPVSK

Sequences:
NA

Specific function: NA

COG id: COG3975

COG function: function code R; Predicted protease with the C-terminal PDZ domain

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA