Definition Pseudoalteromonas atlantica T6c chromosome, complete genome.
Accession NC_008228
Length 5,187,005

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Identifier: 109898626

GI number:

Start: 2810713

End: 2812869

Strand: Direct

Name: Not Available

Synonym: Patl_2310

Alternate gene names: NA

Gene position: NA

Preceding gene: 109898624

Following gene: 109898627

Centisome position: NA

GC content: NA

Gene sequence:

>2157_bases
TTGGATTGGAGGAAACCAATAGCACGACGAAATGCTGTTTTTTTATGCGCACTGTTATGCCATGGCAATGTCATAGCTCA
AGTCGGTGTTAACCCGTTTCAAGTAGACCACATTCCTACTTATACTGAAATCAATCCGCTTAAACGTGCTATTGAGCTTG
CCCGTAAGCAAGGCGAAATGAACAAAGCCGAAGCACTCACTGAGCAGTTTCAGCAGCTAGCGGTTAGCAAAAACGACGCC
TTAGCACTCGCTGATGTGTATTTTGAACAAGCAAGGAATACCATGGAGCGCAATCATTATGCGCCCGCACATGACTTGCT
CAATAAAGCCATCAATGTGTATCAAGAACAAGGCGATCAGGCCGGACTCGCTAAGGCATATCGGCAGCGCGGATTAACCT
ATCGCTACCAATCTAACTATCCTCAGGCTTTAGAATACATCTATTCAGCTATGCAAATCAGTCAGCAGCAAAATGATACT
TCTGCCGTTGCTTCTACCTACAACAGTATAGGGCTTGTGCTGGAGAAGATGGGACTGCTAGAAGGTGCAGCCCAAGCACA
TCAAAGTGCATTAGAAATGCATCATGAGTTGGATGATAAAAATGGTATCGCCAGCGCCCTGTACAACCTTGGTGACCTTC
GACGCCTGATGGGAGACGACAAACTCGCCCTGACTTATTTTCAAGACGCTCTTAAAATAGATTTAGCCTCTGAGGAAAAG
AAGTACATTGCTTATAGCCACAATAAAGTCGGCTTCCAGTTCATTCAACTCGCCGATTATGAGCAAGCTAGATATCACTT
AACAGAAGCTTTGACGCTCTTTCAACAGATTCAAGCGCCAAGAGACACAGATTGGGCAATATTGTCCATGGCTACCTTAG
AAATGAACTTGGGTAACTTACCCCTTTCTCGTACCATGTTAGACGGTGTTATCGAGCGAGCAATTGACAAGCAGTATAAG
AGCTTATTGGTTGATGCTTATCGCACATCTGCGCAATTAGCCCTACTTGATGAAGATACTGAATTGGCATTGCAGCACAT
TGATGCGGGTGTGACACAAGCCAAAAAGAATAATGAATCCCATGACGAAGCGCTGCTAGAAGCGTTACGGGTAAAAGCGT
ATCTGCAGGAAGATGCCCTCAGGCAAGCCTTAGATGCTTTGCTTTATCAAAAAAAGTTAGACGATGAAATACTCAACACC
ACTCGAATCAAAACTATAGCGACACTGCAATCTCAAACAGAGTTCGTGCGCCGTGCCCAACAAATTAAATTATTGGAAAA
AGAACAGGCGTTAACTCAAGTCACATTGAAGCAAGCGCAATGGAGCAGAAACGTTTGGCTAGCGTCGATTGTCGTCAGTG
CCATTTTATTTGCCCTTGTTTACGGTCGTATTTCCCAGCGCAGATTAAACAAGCGACTTAGCGAAGAAGTGGCAATTCGT
ACACTTGAATTGAGCCAGAAAAATGTCGAGTTACAAGCCGCTTATCGGGAAATGGAAGCCATTAGCCTAACCGACAAGCT
TACTGGCATTAACAACCGGCGCTTTTTAGAGAATCACATAGAAACAGATTTGGAAAAAAGCCAACGAATTTATGATGATT
GGCGAGATGGTAAAACACCCACACCTCACCAAGGGGATATTGTCGTTTTCATGATTGATATGGATCACTTCAAGCGTGTG
AACGATGAACACGGTCATCATGTTGGTGACGAAGTGTTACGGCAACTTACAAAGCGCCTAGCGCGCGTGTTTAGGCAGTC
AGATTATCTAGTGCGCTGGGGCGGTGAAGAGTTTGTTGGGATCGCGCGTTTTATAGATCGTAGTGACGCGCCCCTGTTGG
CTCAGCGCTTACTTGATGAAGTCAGCGCTAGTCCATTTCGTCTTTCAGATAAAGCACTGTCTCACTACACCTGCTCTATC
GGTTATGTGTGTTATCCGCCGATTTTAGAACACAGCCAGCAAACGGATTGGAAAACCTTGATCGCCCTAGCCGACGGATG
CTTATATCAAGCCAAAAAAAGCGGACGTAACGCCTGGGTGGGCATTGAAAAAGTTCACCAACCGACGTTGGACCTTATTG
AGCTGTGTTCGCAATATTTTGAGGACTCGGCTCCTACTAACAAGATAACCGTGTTGACCTCGCAAAAATCCCACTAA

Upstream 100 bases:

>100_bases
TTTACCCATGTAATACTTGAATACTATTTATGCTGCGCACCTCATTTGCGCAAGTGTAAAGCGTAAGTTTTTGCTTAGCA
CTATATACACGGAGTTCACT

Downstream 100 bases:

>100_bases
GCGAATAATTTATCACAGTGATGATCATGTAACATTTCTATTGACTCGTACGTCTTCAATCCCCATGTTAATTTTTTGCA
CCCAATTGATTTATCATCTC

Product: diguanylate cyclase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>718_residues
MDWRKPIARRNAVFLCALLCHGNVIAQVGVNPFQVDHIPTYTEINPLKRAIELARKQGEMNKAEALTEQFQQLAVSKNDA
LALADVYFEQARNTMERNHYAPAHDLLNKAINVYQEQGDQAGLAKAYRQRGLTYRYQSNYPQALEYIYSAMQISQQQNDT
SAVASTYNSIGLVLEKMGLLEGAAQAHQSALEMHHELDDKNGIASALYNLGDLRRLMGDDKLALTYFQDALKIDLASEEK
KYIAYSHNKVGFQFIQLADYEQARYHLTEALTLFQQIQAPRDTDWAILSMATLEMNLGNLPLSRTMLDGVIERAIDKQYK
SLLVDAYRTSAQLALLDEDTELALQHIDAGVTQAKKNNESHDEALLEALRVKAYLQEDALRQALDALLYQKKLDDEILNT
TRIKTIATLQSQTEFVRRAQQIKLLEKEQALTQVTLKQAQWSRNVWLASIVVSAILFALVYGRISQRRLNKRLSEEVAIR
TLELSQKNVELQAAYREMEAISLTDKLTGINNRRFLENHIETDLEKSQRIYDDWRDGKTPTPHQGDIVVFMIDMDHFKRV
NDEHGHHVGDEVLRQLTKRLARVFRQSDYLVRWGGEEFVGIARFIDRSDAPLLAQRLLDEVSASPFRLSDKALSHYTCSI
GYVCYPPILEHSQQTDWKTLIALADGCLYQAKKSGRNAWVGIEKVHQPTLDLIELCSQYFEDSAPTNKITVLTSQKSH

Sequences:
NA

Specific function: NA

COG id: COG3706

COG function: function code T; Response regulator containing a CheY-like receiver domain and a GGDEF domain

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA