| Definition | Pseudoalteromonas atlantica T6c chromosome, complete genome. |
|---|---|
| Accession | NC_008228 |
| Length | 5,187,005 |
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Identifier: 109898348
GI number:
Start: 2472405
End: 2475518
Strand: Direct
Name: Not Available
Synonym: Patl_2031
Alternate gene names: NA
Gene position: NA
Preceding gene: 109898347
Following gene: 109898352
Centisome position: NA
GC content: NA
Gene sequence:
>3114_bases ATGATTGAGTCAATACTGCGTTTGTCTATTGAGCGTCGAGGTTTAATGTTGATGCTGATTTTTCTTGTGCTGGGAATGGG GCTATTCAGTTACCAAAAATTACCTATTGATGCGGTACCTGATATCACCAACGTGCAAGTGCAAATCAATACACAAGCAC CGGGTTATTCGCCCTTGGAAACCGAGCAACGGATCACGTTTGTAGTAGAAACAGCATTGGCGGGATTGCCTGAACTATCC TACACCCGCTCTTTATCCCGCTACGGGCTATCTCAGGTAACAGCGGTATTTGATGAAGGCACTGATCTATATTTTGCGCG CAATCTCATCAATACGCGACTGGGAGCAATCAAAAGTCAGCTACCTGAAGGTTTAGAGCCAGAAATGGGTCCTATCGCTA CGGGATTGGGAGAAATCTATATGTATACCTTGCGAGCTGATCAAAGTGCCGTGCAAAAAAATGGTGAGCCATATGACGCA ATGGCTCTTAGGGAAATTCATGACTGGATAGTAAAACCTCAGCTTGCACTCGTTAAAGGGATCACAGAAGTCAACGCCAT TGGTGGTTATGTGAAGCAATACCACGTCAATCCTGATCCACAAAAAATGCTTAATTTCGATGTCAGTTTGAGTGACGTCC ATAGCGCACTGACACGCAATAACGCGAATCAGGGAGCGGGGTTTGTTGAGCGAAATGGGCAACAAATTCTAGTGCGCTCA CAAGGTCAACTCCAGACACTTAACGATATAGAAAGTGTGGTGATTAAACGCATTAATACTGTCCCCGTTGCGGTGAAAGA CATTGGCAGTGTAGCTATTGGTAAGGAGCTGAGAACGGGTGCGGCAACGCAGGAGGGTGTAGAGACCGTTTTAGGTACAG CAATGATGCTAGTCGGCGAAAACTCACGAGCCGTTGCCCAATCCGTTGCCAAAAAGGTGAAGGGCATTCAATCCAGCTTA CCTGATGGTATTGTCATTGAGCCAGTCTACGACCGCACCCTACTAGTCGATAAAGCTATCGACACGGTTCAGAAGAATTT AGTAGAAGGGGCGTTATTAGTCATAGTGATATTGTTCATATTGCTTGGCAATATTCGCGCCGCGCTCATCACTGCGGCAG TTATTCCGCTAGCGATGTTGGCGACCATCACAGGGATGGTTAATACCGGTGTGTCTGCCAATCTGATGAGCCTTGGGGCT TTGGACTTTGGATTAATTGTCGATGGTGCGGTGATCATCGTAGAGAACTGTATCAGGCGGTTATCCGAGTCTCAGAAGCG CACAGGTGGAGTCTTGCCACTAAAAGAGCGGCTAGAACTGGTTTTTCAAGCGACCAACGAAGTCATTCGTCCTAGCTTGT TCGGTGTATTGATTATTACTGTGGTGTATATCCCGCTGTTCTCATTGACAGGCGTTGAGGGCAAGATGTTTCAGCCAATG GCGGCAACTGTCATCATGGCGCTGATAGCAGCGATGCTGTTCTCCATTACCATTGTACCAGCGGCAGTTGCGATGTTTAT GGGCGGAAAAGTCAGTGAAAAAGAAAGCTTCATTATTGTTGCAGCCAAATTCGCCTATCGCCCCATCATTCACCTTGCAC TGAAATTACGCTGGATAGTGCTTGTCGGCTCAGTAGTGCTAGTAGTAGGCAGCTTATGGTTGGCAACGCGATTAGGCTCT GAGTTTGTTCCCCAACTTGACGAAGGAGACATCGCACTGCACGCCATGCGAATACCGGGCACAGGTATTGAACAAGCCGT CGCCCTGCAAAAGACGCTTGAATCTACCTTGATGGAATATGAACAAGTGTTGACCGTATTTGCTAAAACCGGCACCGCGG AAGTTGCTACTGATGCAATGCCTCCCAATGTGACCGATACTTTTGTGATGCTTAAGCCACGTGCGCAGTGGCCAGATCAA ACATTGTCAAAAGCGGATTTTGTTGAAACCCTTGAGCAGGATCTGCAAGCGGTAACTGGCAACAACTATGAGTTCACTCA ACCGATCCAAATGCGTTTTAACGAATTGATCAGTGGGGTGAGAGCTGATCTTGGCATTAAAGTCTTTGGAGATGATTTAA CCACGCTTGTTGCCTCTGCAAACGACATCTTAACGGTTTTGCAATCAATAGACGGCGTGGCGGATGCACGACTTGAGCAG GTCGATGATATCCCTATCTTCACTATCAATCCTAAGCCAGTCGATTTGGCACGTTATGGGTTGGACGTCGCCGACTTGCA GGAGTGGTTGGCGTCGGCCATCGGGGGTAATACCGCTGGCTTAATTTTTGAAGGAGATAGACGATTCGAGTTGCTTGTGC GATTTGATGAAGGTATTCGCACCGATTTAGATGCCATTGGCAGCACTCCTATTATTACATCCGATGGGGAATTTGTACCG TTATCAGAAGTCGCTACACTGAGTTACTCGTCTGTTCCCAATCAAATCAGTCGAGAAAACGGTAAGCGCAGAGTCGTGGT TACCGCCAATGTCAGAGAACGCGACTTAGGGAGTTTTGTTGACGAAGCAAAAATCAAAATAACCGAACAGGTTGCACTGC CCGCAGGCTACTGGCTGGATTATGGCGGCACGTTTGAGCAGCTTGAAAGCGCTAGTCAGCGGCTGTCTATTGTAGTGCCT GCCACGCTTATTCTGATACTGGTGTTACTGGTAGTCGTGTTTGGCTCATTTCGTGATGCTTTGATAATATTCACTGGCGT GCCTTTAGCCTTAACGGGAGGTGTTTTCGCGCTCTGGATGCGTGACATGCCACTGTCTATATCTGCCGGAGTCGGGTTTA TTGCGCTTTCTGGTATTGCGGTACTAAACGGCTTAGTGATGTTGTCATTTATTAAGCAGCGAGTACTAGAAACAGGTGAC TTAATTAACTCAATCGTTGACGGTGCTACCACAAGATTGCGTCCGGTTTTGATGACGGCACTGGTAGCAAGTTTAGGCTT TATTCCCATGGCACTTAATGTCGGAACGGGAGCTGAAGTGCAAAGACCGTTGGCAACGGTAGTGATTGGCGGGATCATCT CATCGACCATTCTAACATTGGTCGTTTTGCCTATTTTGTATCGGGTAATGCATTCGAAATCACACAAAGTGTGA
Upstream 100 bases:
>100_bases TATTTAAAGCCGATTTAGAAAAGTCGGAGGCTGGTCATGATCATTAATCACGCAAGACTATCTGTCTGGTCTATCGCCCT AAATATTGGGAGGCAAACAC
Downstream 100 bases:
>100_bases TTGTTAAGCACCGTATTTAAGAAGATACGGTGCTCTTCGTCTGGAAATTCAAAATAATTGAAAATGATTACTGGATAGTG TATTCACCATTAAGGAACTG
Product: CzcA family heavy metal efflux protein
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1037_residues MIESILRLSIERRGLMLMLIFLVLGMGLFSYQKLPIDAVPDITNVQVQINTQAPGYSPLETEQRITFVVETALAGLPELS YTRSLSRYGLSQVTAVFDEGTDLYFARNLINTRLGAIKSQLPEGLEPEMGPIATGLGEIYMYTLRADQSAVQKNGEPYDA MALREIHDWIVKPQLALVKGITEVNAIGGYVKQYHVNPDPQKMLNFDVSLSDVHSALTRNNANQGAGFVERNGQQILVRS QGQLQTLNDIESVVIKRINTVPVAVKDIGSVAIGKELRTGAATQEGVETVLGTAMMLVGENSRAVAQSVAKKVKGIQSSL PDGIVIEPVYDRTLLVDKAIDTVQKNLVEGALLVIVILFILLGNIRAALITAAVIPLAMLATITGMVNTGVSANLMSLGA LDFGLIVDGAVIIVENCIRRLSESQKRTGGVLPLKERLELVFQATNEVIRPSLFGVLIITVVYIPLFSLTGVEGKMFQPM AATVIMALIAAMLFSITIVPAAVAMFMGGKVSEKESFIIVAAKFAYRPIIHLALKLRWIVLVGSVVLVVGSLWLATRLGS EFVPQLDEGDIALHAMRIPGTGIEQAVALQKTLESTLMEYEQVLTVFAKTGTAEVATDAMPPNVTDTFVMLKPRAQWPDQ TLSKADFVETLEQDLQAVTGNNYEFTQPIQMRFNELISGVRADLGIKVFGDDLTTLVASANDILTVLQSIDGVADARLEQ VDDIPIFTINPKPVDLARYGLDVADLQEWLASAIGGNTAGLIFEGDRRFELLVRFDEGIRTDLDAIGSTPIITSDGEFVP LSEVATLSYSSVPNQISRENGKRRVVVTANVRERDLGSFVDEAKIKITEQVALPAGYWLDYGGTFEQLESASQRLSIVVP ATLILILVLLVVVFGSFRDALIIFTGVPLALTGGVFALWMRDMPLSISAGVGFIALSGIAVLNGLVMLSFIKQRVLETGD LINSIVDGATTRLRPVLMTALVASLGFIPMALNVGTGAEVQRPLATVVIGGIISSTILTLVVLPILYRVMHSKSHKV
Sequences:
NA
Specific function: NA
COG id: COG3696
COG function: function code P; Putative silver efflux pump
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA