| Definition | Pseudoalteromonas atlantica T6c chromosome, complete genome. |
|---|---|
| Accession | NC_008228 |
| Length | 5,187,005 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 109898094
GI number:
Start: 2128778
End: 2132272
Strand: Direct
Name: Not Available
Synonym: Patl_1774
Alternate gene names: NA
Gene position: NA
Preceding gene: 109898092
Following gene: 109898095
Centisome position: NA
GC content: NA
Gene sequence:
>3495_bases ATGCGTTTAAAGAAAATAAAGCTCGCGGGGTTTAAGTCTTTTGTAGATCCTACCAGCATCCCCTTTGTTGATGATATGAC CGCCATAGTCGGGCCGAACGGCTGCGGAAAATCCAATGTGATAGATGCTGTGCGCTGGGTATTAGGTGAAAGCTCTGCGA AAAACTTACGTGGCGATGCCATGATCGACGTTATTTTCAATGGCTCCACGGCAAGAAAACCGGTATCTCAATGCACCGTT GAGCTCGTATTTGATAACACCTCTGGGCGTATTCAAGGGGAATTTGCCAGTTACAATGAGATATCCGTTAAGCGCTTAGT CACCAAAGATGGCCAGTCGAGTTATTTTTTAAACAACAGCAAGTGTCGTCGCAGAGATGTCACCGATTTGTTCCTCGGCA CAGGGCTTGGCCCGCGTAGTTACGCGATCATTGAACAGGGCACTATTTCAAGGCTGATCGAATCAAAACCCCAAGAGCTG CGAGTCTTTATTGAAGAAGCGGCAGGTATTTCCAAGTACAAAGAGCGTCGCAGAGAAACTGAAAACCGCATTCGCCACAC CAAAGAAAACTTAGAGCGCTTAGAAGATGTCCGCGGTGAGTTAGGTGCGCAATTACAAAAATTGGAAAAACAAGCATCAG CTGCAAAGAAATATAAAGAACTAAAACAGCAGGAGCGACAATATCGAAATGAATTGGCGGCCATGCGTTGGTCTAACTTT AACGCCAAAATAGTTAGCCTAGAGCAACAAACGCATCAGCAAGAGGCAGACCTAGAAGCCTTTATTGCCCGCCAACGAGG AGATGAAAAAGAAATAACAGTTTATCGTACACGCCAGCAAGAACTCAAACAGCAACTGCAAGATACACAACAAGGGTATT TTCGTCTTGGCACCGACATCACTCGCCTAGAACAAAACCAACTGCATAGTAAACAACGCATTGGCCAAATTAAGCAAGAA TTGAGCACTCTAAATGAGGCAGTAAAAGACAGTGAGGTTGAGCTGCAGGCTAGTGTCACTCGGTTGGCTGAGTTAACCGA CGTGATTGAACAACATGGGCCAGAACATGAATTAGCACAACAAGCACTAGAAGATGCTATCTGGCAATTGCAAAATACAG AAGAGCGCACCTCAGCCGAGCAAAATCAATGGCGAGAGCAAGAACAAACCTTTCAAAAATACAAGCAACAAGCGCAACGT TATCATAGCCAAATCCAATCAATTTTAGCTATGCAAATGCGCAGTGAAGAGCGCATAAGTGAAATTACCAGTGAGATCAA TAGTCTAAAAACGGACGAGTTTGCAACGCAAATAGATGAGGCCAAAACGGCGCAAGAACTCATCCAAGAGCAATATGATG AGGCGCAGTTACAATACCAGCTTCGAAACGAGGCTTTGCATCAAGCTCAGTTAGATTGGCGAAAATTCAGCGACGCACAA ACAAAAGTACAAGGTGAATTGCAAACCATAGAGGCGCAAATAAAAGCTTTGCAAGGCGTACAAAATTTAGCAAGAGGTCA TGAAGATTATCAACAATATTTACTGGAAAAGGGCATTGATAGCCAACCATGGCAGGCTGCGTTGACCGTAAACTCAGGAT GGGAAAAGGCTGTCGAAGCAGTTACAGACCAGTGGAAAAATGCACTTATTGTGAATAACATTGACGATATTGGCGTGTTT GAAGAAGCGCAGTGCCAAGGCATTGCCTTAGTCGTCAATAATAACAACGACCAAAGCGGCGATTTAGCGCGTAAAGAAGG GACTTTGGCAACCGTGCTCGGTGACAGTGTCATTCCTCAGTGGATGGCGGATATTCGTATCGCTCGTACCCGGCAAGAGG CTTTGGCTGCGCGTAACGCATTAACCCGCGGGCAAAGTATTGTCAGCGCAGATGGATTATGGCTTGGTAAGGATTGGGCG CTCGATGGTTGCAGTGAAGATGCCGGCGGCAGTATACAGCGCGCTAACGCTATCGCCGCTCTTGAATCTGCGCTGCCGGC TATACAACAACAGTGCGAAGAAGCACAGGGCACTAACGAGCAAGCGCAAGAAAACGTTGAGCATTTAAGTACACTTAAAG AGCAAGCACAGGGCAATTTATCTCGTTGCAGTGAAGCACTAAGCGAGCATAAAAATCACCACCAATGGTTGGTTCAGCAA CAGCAAACGAACGCTCAGCGCGTGACAAAACTGCAAGCGGAACTTAAGCGCCAACAAGACATCTTGCTTAAAGAGCAAGC CGAACTGACCGAAACTACTGCGCAGACCGAAGAGTTGGCTGAAACACTGTTAGGGCTAGAAGAGCAGCAAAACGATATAG AGCGGCAGCGTGAAGCGTTTAACAATCAACTTCGAGAGCAGCGCCATCAAGTTGATAATCTAAAAAATCAACAACATCAA CACGCCTTAACCTTAAAAGGTCAACAAGCGGAAGTACAAAATGTACAGACCATTCAAGCGCGCGAGCGTGCTCAATTGCA AAATATGTTGTATAAAAAAGAACAGTTGAACAACGAGTTATCGCTATTGTCTACTCCACTCGATGAGCAAGCTGGGGCTC TACAGGCAATGTTAACAGAGCATAAGCAACTGGATGATAAGCAGCAAACGCTAAACACAGCCTTGGGTGAACTTGAGCAC CAACTCGCGGTAATTGAAAAAGGTCAGCAAAGCATTAATGCGCAGATTCAACAGATGCAGCAAGATGTACAAACTAGCCA ATTAGCGTGTGAAGGTTACCGCGTTCGTGCCAAAAGCGTTATCGAACAACTCAGCGAAGCTAAAGTGCAGTTACAGCCTT TACTTGAGGCAATAGGCGAAAATAGCGACGAAAAGCGCTGGCAAGAATATTTAGAGCGCACCGTTGCTGCAGTCGCTAGG CTTGGGGCTGTTAACTTAGCTGCCGTTGAAGAATACGATATTCAAGCTCAGCGCAAACAACATTTAGATGAACAAAATCA AGATCTTGAATCCGCTCTTGACACGTTAGAGCAAGCAATACGTAAAATTGACAAAGAAACCAGAAGTCGCTTTAAAACGA CTTTTGATCAAGTCAATAATGGCTTACAAACTCTGTTTCCTAAGGTCTTTGGGGGCGGCTCTGCCTACTTAGCCTTGACC GATGACGATTTACTGGAAACAGGGGTGAGTATTATGGCGCGACCACCGGGCAAGAAAAATAGCACAATTCATCTGCTTTC TGGTGGAGAAAAAGCGCTGACCGCTTTATCATTGGTTTTCGCAATTTTTCAACTGAATCCAGCACCTTTTTGTTTGTTGG ATGAAGTCGATGCACCGTTGGATGATGCCAATGTGGGGCGTTTTTGTAAGCTGGTAAGCGAAATGTCTACCAGTGTGCAA TTTATTTATATCACCCATAACAAAATTGCGATGGAAATGGCTAGTCACTTAACGGGGGTCACCATGGCTGAGCCGGGTGT ATCACGTATGGTCGCTGTTGATGTGGAACAAGCTTTAGCTATCGCGCAAGCATAA
Upstream 100 bases:
>100_bases ACATGGTCGCGACAAAACGTCAATTGTTACATGGGGTGAGTTTTGCTACATTTCCACTGTTTCCCATAATAACGATAAAA CCGGAATCCTCTTTTTATTC
Downstream 100 bases:
>100_bases TAAAAAAGGGTATGAGTTAATTCGATGGAAGATGTATTACGCTGGACGTTATTTATAGTAGGTACCGTGGCAATTGCTGG GGTATTGATTCATGGCTTAT
Product: chromosome segregation protein SMC
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1164_residues MRLKKIKLAGFKSFVDPTSIPFVDDMTAIVGPNGCGKSNVIDAVRWVLGESSAKNLRGDAMIDVIFNGSTARKPVSQCTV ELVFDNTSGRIQGEFASYNEISVKRLVTKDGQSSYFLNNSKCRRRDVTDLFLGTGLGPRSYAIIEQGTISRLIESKPQEL RVFIEEAAGISKYKERRRETENRIRHTKENLERLEDVRGELGAQLQKLEKQASAAKKYKELKQQERQYRNELAAMRWSNF NAKIVSLEQQTHQQEADLEAFIARQRGDEKEITVYRTRQQELKQQLQDTQQGYFRLGTDITRLEQNQLHSKQRIGQIKQE LSTLNEAVKDSEVELQASVTRLAELTDVIEQHGPEHELAQQALEDAIWQLQNTEERTSAEQNQWREQEQTFQKYKQQAQR YHSQIQSILAMQMRSEERISEITSEINSLKTDEFATQIDEAKTAQELIQEQYDEAQLQYQLRNEALHQAQLDWRKFSDAQ TKVQGELQTIEAQIKALQGVQNLARGHEDYQQYLLEKGIDSQPWQAALTVNSGWEKAVEAVTDQWKNALIVNNIDDIGVF EEAQCQGIALVVNNNNDQSGDLARKEGTLATVLGDSVIPQWMADIRIARTRQEALAARNALTRGQSIVSADGLWLGKDWA LDGCSEDAGGSIQRANAIAALESALPAIQQQCEEAQGTNEQAQENVEHLSTLKEQAQGNLSRCSEALSEHKNHHQWLVQQ QQTNAQRVTKLQAELKRQQDILLKEQAELTETTAQTEELAETLLGLEEQQNDIERQREAFNNQLREQRHQVDNLKNQQHQ HALTLKGQQAEVQNVQTIQARERAQLQNMLYKKEQLNNELSLLSTPLDEQAGALQAMLTEHKQLDDKQQTLNTALGELEH QLAVIEKGQQSINAQIQQMQQDVQTSQLACEGYRVRAKSVIEQLSEAKVQLQPLLEAIGENSDEKRWQEYLERTVAAVAR LGAVNLAAVEEYDIQAQRKQHLDEQNQDLESALDTLEQAIRKIDKETRSRFKTTFDQVNNGLQTLFPKVFGGGSAYLALT DDDLLETGVSIMARPPGKKNSTIHLLSGGEKALTALSLVFAIFQLNPAPFCLLDEVDAPLDDANVGRFCKLVSEMSTSVQ FIYITHNKIAMEMASHLTGVTMAEPGVSRMVAVDVEQALAIAQA
Sequences:
NA
Specific function: NA
COG id: COG1196
COG function: function code D; Chromosome segregation ATPases
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA