Definition Pseudoalteromonas atlantica T6c chromosome, complete genome.
Accession NC_008228
Length 5,187,005

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 109898082

GI number:

Start: 2116612

End: 2118330

Strand: Direct

Name: Not Available

Synonym: Patl_1762

Alternate gene names: NA

Gene position: NA

Preceding gene: 109898081

Following gene: 109898084

Centisome position: NA

GC content: NA

Gene sequence:

>1719_bases
ATGTTTGAGCGTGTTATGTCTGAGTTGTTTTTACGTCAGCAATTTCCCATTTTTCACCAACAAAATGACGGATCGCCTTG
GCTATATTTCGATAATGGTGCCACCACACAAAAGCCGCAGCCAGTTATTGATACCATAACTCGCTTTTACTCCCAGCAAA
ATGCGAATGTACACCGTGCTAGCCACCGAGTATCTGCTGACACCACAAACGCCTTTGAGCAGGTGCGTAAAGATGTCGCT
GCATTGATCAATGCCAGCAGTGAAAAAGAAATCATTTGGACCAAGGGCACAACAGAAAGCATTAACTTATTGGCTAACGT
ATTGGCCAAGGGGCACGTGGAATCTGGTGATGAGATTGTGTTGTCTGCGCTGGAGCACCACGCGAACATTGTACCTTGGC
AGCAAATCGCTAATGAACTGGGACTGCACATAAAAGTGATCCCAGTGAATAAAGATGGTGTGCTGCAGTTAGCAAACATT
AAAAGTTTAATCACCGATAAAACTGCTTTGGTAGCGGTTAGTCATGTCTCTAATGCGCTGGGAAATATAAACCCAATTTC
GCACATTATCGCTCATGCTAAAAAGCATGGGGCATTAACGCTAATTGATGGTGCCCAGGCTATTGCTCATTTACCCGTAG
ACGTGCAGGCGCTTGATTGTGATTTTTATGCTTTCAGTGGTCATAAGATGTTTGGCCCAACGGGAATTGGCGTTTTGTAT
GGCCGCCAAGTATTACTCGATGGTTTACCGCCGTACCAAACCGGTGGTGAAATGATTGAAAAGGTGAGTTTTTCAGGTAC
AACCTTTCAAGGATTACCGTTCAAATTTGAGGCCGGCACACCTAATATTGCTGGCGTGTTGGGTTTAGGGGCGGCCGTGT
CTTTTTTAAAGACGCATCAATCGGTAATCCATGAACAAGAGCAAGCCCTGTATACCTCGTTAGTTAATGGCTTGCGAAGC
ATTTCAGGTATACGTTTATGGGGGGACCTTGAAAACAGCGTTTGCGTGCAATCATTCACTGTCGATGGGATCAACAACCA
GGATCTTGGGCTATTGCTTAACGAGCATAATATCGCGGTTAGGGTAGGTCATCATTGTGCTATGCCATTGATGCAGGCGC
TCTCAATTGATGGCACGGTGCGGGTTTCCTTGAGTGGCTACAATACCTTGCCAGAAATACATCATTTCATTGACGTGCTA
CAAGGTATTGTAAGCTCGCTGCGCCCTGATTCTATAAACGCCAGCCAAGATTTAACGTCAGTAGCAGTGGTGAAAAACAC
TGCACCGCAAAATGAAGCATGGAATGACAAGGCGTTTGATTTTGACACTATGCCACTGGCGCTGAGCATACGACAGGCCA
AGGGCTGGGATGAAACCTACCGGCAAATTATGCTCGCCGGTAAACAATTGCATAAATTGCTTCCTGAGGATCACACTGGG
CAATACGAAGTGATGGGCTGTGAGAGCCAAGTGTGGCTGAAATGCGTTGTACGCGATGATCACCTTATTTTAGCTGCTCA
TTCGCCAAGTAAAATCGTACGCGGGTTATTGGCCATCATTTTTGAGCCATTAGCGCGTCTAACGGTGCGTCAAATAAAGC
AATTTAGTCTGCATGATTATTTACACGCGCTGGGGCTAGGTAAGCATGTGAGTCAATCAAGAGGCAATGGCTTGCAAGCC
GTGATTGAACAAATTCAACACCAGGTTCACTCACGTTAG

Upstream 100 bases:

>100_bases
TTAGAAAAGCGCGCAGTTATTTTTTATTAGTGGGTGTAAATAGCCAAATTGACTTGATAAAGCCGCTGATATTAACAACA
ATTCGCAGCCTTTATTGATT

Downstream 100 bases:

>100_bases
TTGGGATGTATAAAAATGAGCTGATGTGGCTATTAGCGCGGAAAACGAATGCGAAAGATGAGCGTGAATTATTTTATCAA
GGGTAGAATAGTCTTAAAAG

Product: SufS subfamily cysteine desulfurase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>572_residues
MFERVMSELFLRQQFPIFHQQNDGSPWLYFDNGATTQKPQPVIDTITRFYSQQNANVHRASHRVSADTTNAFEQVRKDVA
ALINASSEKEIIWTKGTTESINLLANVLAKGHVESGDEIVLSALEHHANIVPWQQIANELGLHIKVIPVNKDGVLQLANI
KSLITDKTALVAVSHVSNALGNINPISHIIAHAKKHGALTLIDGAQAIAHLPVDVQALDCDFYAFSGHKMFGPTGIGVLY
GRQVLLDGLPPYQTGGEMIEKVSFSGTTFQGLPFKFEAGTPNIAGVLGLGAAVSFLKTHQSVIHEQEQALYTSLVNGLRS
ISGIRLWGDLENSVCVQSFTVDGINNQDLGLLLNEHNIAVRVGHHCAMPLMQALSIDGTVRVSLSGYNTLPEIHHFIDVL
QGIVSSLRPDSINASQDLTSVAVVKNTAPQNEAWNDKAFDFDTMPLALSIRQAKGWDETYRQIMLAGKQLHKLLPEDHTG
QYEVMGCESQVWLKCVVRDDHLILAAHSPSKIVRGLLAIIFEPLARLTVRQIKQFSLHDYLHALGLGKHVSQSRGNGLQA
VIEQIQHQVHSR

Sequences:
NA

Specific function: NA

COG id: COG0520

COG function: function code E; Selenocysteine lyase

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA