Definition Pseudoalteromonas atlantica T6c chromosome, complete genome.
Accession NC_008228
Length 5,187,005

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Identifier: 109898076

GI number:

Start: 2100863

End: 2104363

Strand: Direct

Name: Not Available

Synonym: Patl_1756

Alternate gene names: NA

Gene position: NA

Preceding gene: 109898075

Following gene: 109898077

Centisome position: NA

GC content: NA

Gene sequence:

>3501_bases
ATGTTGCATCTGGTTCAGTCTAATAAAATGGAAAGTCTCGCCGCTTATCTCATCGGGTGGTTAGGCGAGAGTAAAAGCAG
CCTAGATGATATCTTTTCCCCCGACGTGGTGTTAGTGCAAAGCCCCGGTATGGCACAGTGGCTAAAAATAGAAATTGCCC
AGGCATTGGGTATTTCTGCCAATATCGATTTCCCGTTACCCTCAAGCTATATCTGGCAATTATACAAAGGCCACGTAAAC
GATTTACCTGAGCAGTCTGCCTTTACTAAAGACAACATGACGTGGAAGCTCATGAGCATATTGCCTGAAATGAGTGATAG
AACTGAATTTGCCAGCATTGCCCAGTATTTAGATGATCAACAGCCGCTTAAGCTTTATCAGTTATGCCAAAAAATAGCCG
ATATTTACGATCAATATTTGGTCTATCGCCCAGAGTGGATCCTGGCTTGGGAACAAGGCGAAAATAACGTAGCCGATACC
GACGTGTCCGCCCAACCTTGGCAACCTATTTTATGGCGAGCTTTGGTTGAATATGCCAAAGAGCTGGATGAGTCTCCTTA
TCATAGGGCGAATTTGCATACACGCTTAATGGCCGAGCTTGAGGACACTAAAAGCAGCAAAGATGAGCTGAAACCCTTGT
TTGTGTTTGGCCTGTCAGCGATGCCTGTGCAACAACTTGAAATTTTCTCCGCGTTAGCGAAAAGTCGCGACGTGATCATC
TTTTGGTTTAACCCCAGCGCCCATTACTGGGGCGATATAGTAGACAACAAACAAGTACTGCAAGCCAAATTGCAAAGCTT
ACTCGCTCAAGCAAGTGAAGATGCCCAAAGTGGCTTAAGCGGTATGGATGATTACCTATTGGTTGGCAACCCGTTGCTCG
CCTCTTGGGGCAAGCAAGGGCGAGACTACCAAGACATGATCTTGGGCTTAGAGGTTGAATTGCATGATGCGTTTATCGAG
CAAGAGCCCGAAAGCTTGCTTGAACATATGCAGCACGAAGTATTGGCGTTAACTCATCGCGGGGCGATAGAGCCACTACC
CGCACAAGAGCTGCTAACAAACGGTGAAGAATACCCTAAGATACCTCTGGCTGAAGACGACATGACCTTGCAAGTACATG
CGTGTCATTCAGCAGTACGTGAGCTCGAAGTCTTACATGACCAGCTATTGCACCTTTTTGCTGATCACCCTGAGCTACAC
CCGGGGGATGTGATTGTAATGATGCCGGACGTGGCAAGCTATGCACCGATCATTGATGGTGTATTTGGCGGCACAGACAA
AGCGCTGCATATTCCTTATGCTATTTCCGATCGCAACGCCCAGCAAGAGTCGCCTCTACTCAATAGCTTTATTCAACTGA
TGTCGCTACATCAAAGCCGGATCGGTTTATCCGATGTACTGGCCTTGTGTGAAGTGCCAGCAGTACAGCGAAAATTTGAT
ATCACCCCAGAGGAATTTGACTTATTAAGTGTATGGCTAGCTGATGCAGGTGTGCGTTGGGGCTGGGATGGCCAAGATAA
AACACGCTGGGCATTGCCCAACGAACCGCAAAATACCTGGTTGTTTGGTTTACAACGTTTGTTGGCCGGCTATGCCATGG
GCGGTGAAAGCATGTTTGATGATGCTCATGAGCCAATTGCACCTTATGAACACATCGAAGGCCAGCACGTTGTGGCTTTA
GGTAAGTTTTATTTGTTCAGTCGCGAGCTTGGCAACGCGTTAGCCTTTTGCCAAAGTGCGGCCAGTTTGCATGCGAAAAT
CAAAGGTGCTCTGTCACTCATTGAACAGCTGTATTTGCCTGACGATGATGACCAAACGTATGTGCTACAACTGCGCCAAT
CACTGGAGCAAATGACAGTACACGAGCATCAATTCAGTGGTGAAATTGTGCATGATGTTTTCCTCGCTGAGCTAGAGCAA
AGTTTATCCAGCAAAGGCGTAGGCCAGCGCTTTTTAGCCGGTTATGTGAATTTTTGTACCTTAATGCCCATGCGCAGTGT
GCCGTTTAAAGTGGTGTGCTTGCTTGGTTTAAACGATGGTGATTACCCAAGGCAAGTGGTGCCGGTTGGTTTCGATTTAA
TGCGCATCGGCAAAGGGCGTAGGGGAGACCGCTCTCGCAGGCTAGATGACAGATACCTGTTTTTAGAGGCCATTTTATCT
GCGCGTAAGCGACTGTATTTAAGTTTTCAGGGCTTTAGCGCTAAAGATAACTCGCCGCGTAGCCCATCAATTTTGCTTAG
CGAGTTACTTGAGTACACACAACAAACCTTCTGCTTGGCAGGTGATGAGAGCTTAGAAACCAAAACATGCGCCGATAATT
TAGCAAAGCATATTTATCATGAGCATGCATTGCAGCCATTTAATCCTGTGTATTTTGCGACTAAACGCGATGCCCACGAA
GAGGAACCGTTGCCAAGCGCGATGGCTAGTTTTCAAACTCCTTGGCTGGCATTAGCGCAGCAGCTGACAGATGGCAGTGT
GCACAGTGATAAAGAAGTGGATTTTTGTCCTGCGCCGTTATTTTCCTTGCCTGAGCTTGCTCAAGTGACAGAGGTCGAGT
TAGACGAATTGTTGATATTCTTTAGCAATCCCGCGAAGGCGTTTTTCAGCCAGCGCTGGCAAACCCGTTTGACCCGTGTT
TATGACGTTCAAAGTGACGATGAGCCGTTTGAGCTTGATGCGTTGTCGCGCTATGTGTTGAACGAGCGTTTTGTCACCAC
GCAGCAACAGGATTGGACAACGCGTTTACGGGCAGAGGGTAAATTGCCCACAGGAAATATTGCCGACATAAGTTTGCAGC
CCATTCGTAAACAATCCCGAGCGTTAATTGATGCGTTGGTGGCATTGATTGGCGGGCCGCTGGATGAGGTGCCGCCCACG
CGAGCAGAAGTTAACTTTGAGTTGAGCTACTTGTTGGATATTTCACCCGTCCCGGCAAGTGAACTAAATGCCAACACGAA
CTCATCAACACAAAATTCGGTGTCAGCAACAAGTACTCAACGTATTCAGATAACCGGCTGGGTAGACAATCTATACGGTG
GCAATTTGGTGCTATGGCGACCGGGCAAAGTCAAAGGCAATAACGTATTGCAACTATGGCTAACCTGGTTAGCCCTGTGT
GCTAACGGCAGTGTGGCAAAACACCAACGCGCCTATTACATTGGCGTGGAGGATAAAGAGCCCTTTAGCATTGGTGCTGT
CGATAAAGATGAAGCGAAAACCCAACTGGCGATATTCATACGTTATTGGCGATTAGGCCAGCTGCAGGTTTTACACTTTT
ATCCTAAAACCGCTTACGAATGGCTTAGTGTCGGTGATGAAGCAAAAGCACTGATGAAGGCGAAAAACGCTTTTTATGGC
AGCTATTTCGCCAAAGGAGAAGGGGAAGAGCCACATATTCGCCGGGTTTGCCCAGATCTAAACCAGCACTTCTGTGCATT
CAGTGAAGTCAGCCATGCTTTATTTGACCCGCTGTTTGACGCATTGGGAGAGGCCTCATGA

Upstream 100 bases:

>100_bases
TTTCTCACTGTGCAACGAATGCTAATTCAGTAATCAATAGTGGTTTTATAAACAGTATTTTTGCTACACTTGGGCATCAA
TTTCCCGAGTGTAGTTAGCT

Downstream 100 bases:

>100_bases
TCCCGTTAAACACCAAAACCTTTCCGCTCACTGGGGCATCATTGATTGAGGCCAGTGCAGGTACCGGTAAAACCTATACC
ATAGTAAACTTGTATTTGCG

Product: exodeoxyribonuclease V subunit gamma

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1166_residues
MLHLVQSNKMESLAAYLIGWLGESKSSLDDIFSPDVVLVQSPGMAQWLKIEIAQALGISANIDFPLPSSYIWQLYKGHVN
DLPEQSAFTKDNMTWKLMSILPEMSDRTEFASIAQYLDDQQPLKLYQLCQKIADIYDQYLVYRPEWILAWEQGENNVADT
DVSAQPWQPILWRALVEYAKELDESPYHRANLHTRLMAELEDTKSSKDELKPLFVFGLSAMPVQQLEIFSALAKSRDVII
FWFNPSAHYWGDIVDNKQVLQAKLQSLLAQASEDAQSGLSGMDDYLLVGNPLLASWGKQGRDYQDMILGLEVELHDAFIE
QEPESLLEHMQHEVLALTHRGAIEPLPAQELLTNGEEYPKIPLAEDDMTLQVHACHSAVRELEVLHDQLLHLFADHPELH
PGDVIVMMPDVASYAPIIDGVFGGTDKALHIPYAISDRNAQQESPLLNSFIQLMSLHQSRIGLSDVLALCEVPAVQRKFD
ITPEEFDLLSVWLADAGVRWGWDGQDKTRWALPNEPQNTWLFGLQRLLAGYAMGGESMFDDAHEPIAPYEHIEGQHVVAL
GKFYLFSRELGNALAFCQSAASLHAKIKGALSLIEQLYLPDDDDQTYVLQLRQSLEQMTVHEHQFSGEIVHDVFLAELEQ
SLSSKGVGQRFLAGYVNFCTLMPMRSVPFKVVCLLGLNDGDYPRQVVPVGFDLMRIGKGRRGDRSRRLDDRYLFLEAILS
ARKRLYLSFQGFSAKDNSPRSPSILLSELLEYTQQTFCLAGDESLETKTCADNLAKHIYHEHALQPFNPVYFATKRDAHE
EEPLPSAMASFQTPWLALAQQLTDGSVHSDKEVDFCPAPLFSLPELAQVTEVELDELLIFFSNPAKAFFSQRWQTRLTRV
YDVQSDDEPFELDALSRYVLNERFVTTQQQDWTTRLRAEGKLPTGNIADISLQPIRKQSRALIDALVALIGGPLDEVPPT
RAEVNFELSYLLDISPVPASELNANTNSSTQNSVSATSTQRIQITGWVDNLYGGNLVLWRPGKVKGNNVLQLWLTWLALC
ANGSVAKHQRAYYIGVEDKEPFSIGAVDKDEAKTQLAIFIRYWRLGQLQVLHFYPKTAYEWLSVGDEAKALMKAKNAFYG
SYFAKGEGEEPHIRRVCPDLNQHFCAFSEVSHALFDPLFDALGEAS

Sequences:
NA

Specific function: NA

COG id: COG1330

COG function: function code L; Exonuclease V gamma subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA