Definition Pseudoalteromonas atlantica T6c chromosome, complete genome.
Accession NC_008228
Length 5,187,005

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Identifier: 109897166

GI number:

Start: 987484

End: 990435

Strand: Direct

Name: Not Available

Synonym: Patl_0839

Alternate gene names: NA

Gene position: NA

Preceding gene: 109897164

Following gene: 109897168

Centisome position: NA

GC content: NA

Gene sequence:

>2952_bases
ATGAAATGGTTTCAGCCTAGTAAGGCGTCACTTGCGATAGCTTTTGGACTCGCTAGTGCAGGGTATGTACATACATCATA
TGGACAACCAGCAGTCGTGAGCGTTGATTTAAGTAAGCAATTATACGTAGGTGATACCACAGCACTCGATCGCAATAAAT
TCTTCAATATTCATTCAAGTCCCGGTGAACCCGGCGCCGCTGAACAAGACATGCTTTACATTAAAAATGAGCTCAACGCT
CAGTATGGGCGGATCTTTTGGGGGCCAATGGCCCTTAATGGCAGTGCTGATTATCCCGATACTGAACAGGCGATGCTTGA
CGGTGAACAATCGATTATTAATGCCAAGGCTGGGGCGTTCTATGAATTCGGGACTAATCGTATGGTTGCGACTGAACACC
CTAGGAGCGTATTGGCGCCGGGCAACGATCCGGTGGAAGGCGCGCGCTGGGCTGCAGACTACTTTGAGTATTATTTTGAA
GATGAAAGGCGTCCACTATTTTATGAACCAATGAATGAGCCCTTTGTCCATGCATCAGATTTCGTTGATGGGCCATGGGA
TCCCGTCGCTAACGAAGCAGTACAAAGACACATGGCGTCTTGGTTTGCTGAGATAGGTAAAACGTTTGACCAGCGAGGTT
TAAATACTAACGTTATCGGGTTTTCTTCAGCGTGGCCGTCTTTCGAGCTGTCAGATTTTTCCCATTGGCAGTCCCGTCAA
AAAATGTTTATGGACCTTGCGGGCGACCACATGGATGGTTTTTCCTTTCACTTGTACGATGGTGTCAATGTAGAGGGCCA
AGACAATTTCCGTTCTGGCAGTAATGCAGAAGCCATCATTGATATGATTGAAGCATACAGTCATATTAAATGGGGAGAGG
TGAAAGACCATGCCGTGACTGAGTACGGAGGGATCATTGATGGCTACCCGCTTGAATACAGTGCTGCAAAAAGTGCGCAG
GAATTGCGTTCTTACAACCATATTTTATTCTCGTTATTGGAAAGAGAAGACAGAATACTGACATCGACACCATTCATTAC
GGGGATATCAAAGTGGTTTTATGATGCGAACAACTTCAACCCCTATTCAGCGACAGTGCTGCGCCCCGATCCAAATAAAA
TTATCTCAAATAAGGTCAACGGATACTTGCCCACTGAGAAAGCCTACTTTTATAAGTTATGGTCTGATGTGAAGGGCAAT
CGCGTGGCGGTAGATACGTTAGATCCCGATCTCGCTGTGCAGGCATTCAATTATGGCAGTACGCTGTATTTGGCGTTGAA
TAACTATGAAGACAGCAGTAAAGACGTTGATTTACGTTTTATTTACCAAGGGAACTCGGTATCACAAGTGCGGGCGAAAC
GCCTAGATGTGCCGTACGATCAAGCGGCGAACTACACGGATGAAATCCTATCTTCAGCGCCTTCCAGCATTACCATGCAA
GGACATGAAACAGTCGTGTTGGAATATGAGTTCGCTCAGCCGATTTCACCGGATGGTATCGTGCGAAAGAGTAGTTATTA
TGCGCAAACTTATTTACAGCCCATTGTTGAAAACACTGAGTTGGCATTTACCTTCAATGATATTGATGTAGGGCAAAGCT
CCATGGGGTTTGCGGATGTATATCAGGGGGTGGAATTTGACCAAGCAGTAGTAGACGCCATTCAAACGAACGAAATTAAT
CGTTTAACGTCGACCATGCGTAGTTTCGATCGACAACTGACGAACATAATAAACAAACACTCCGATGCATGGCGTGAAAG
TGCCGACTTTGCGCGCCTAATACAAAGAGCGGAGCGCTCGGCGACGACAGCTAAAGCCCTGCAATATCATTATGCTATGC
ATGGGTATAATGCCTCAGAGCGCACGGCCATACTTAAAATGGGTGTGGGTCGCAAACACGATAAATCTAAACAACCAGTG
GTGTTAGTTAACGGATACAGAGTTGAGGTGCCTAATGATTGGCGCGGTTACGATCAAACCTCACGTGAAGACTTCTTCGG
CGTGATTGAAATCCCCGTGCCAGCTAAATTTTTGAAGGCGAATACCAATATTGAGTTAATATTTCCTGACACTCAAGGGC
ATGTTAGTTCGTTGATTTTAGAGGTTGATACCCAAGAGCCATTGCAAACTGTTGCGGTGACAGGCCTTGAAATGCAAAAG
CCTTATGTCGCCATTAAGAAAGACCGCCCTTATCGTTTGTTTGCCAACGTCATGCCGCAAACGGCCACCAATAAATACCT
GCTTTGGCAGTCTAGTGATGAATCTATCGCTACTGTTGAGGATGGCTTAGTCACGCCGATAGCCCCAGGTTTCGTTGACA
TTAGCGCAATGAGTGAGGATGGCGAGTTTAGTGCTTCCACAAGTGTTGAGGTAAAAGACGAACTGACGGTCAGAAACACC
ATCGTTATTACTAACGATGTGTCATCAATGGAACCGACAAATAGCATTACCCTTGATATTGATTACTCGACGAGTATCGA
TCGCGACGTTGCATTTGAGTTGATAGGCCCCCAAGGTAATTGGCTAGGTTTAAGTCGCGTTACCGTGCCAGCGGGAGAGG
GCACAACTCAGATCACTCTTAGCTTTGAAGAAACGCTTGCCCCCGGAACGGGCTATAAAATAATAGCTGCCCTGCGTGAA
GTAGGCGGGGACTGGAGAACCAGTGTTGATGGTCACACTATCACTGGGGTTGAAATCGCCTCTCCAGATGCCGCACCTGT
TCCAGTTGACAATTTGTTAGGGGCAAATGGTGACTTTGAGCAAGGTACATTGGGAGATTGGCAACGCGTGTTTGGTTCAA
CTGGTGACGTCGACATCAGCCAAGAAGCCGCTTACAACGGTAGCTATGGCATTAAGTTCGACACTGCAAATGGAAGAGCG
GGTATTTCACTTGGCGAAAACGTCTTACCAACAGCGCTAATGAAAGCTAACAAGAGACTATGGCGTCAATAG

Upstream 100 bases:

>100_bases
AAACATTTTTAGTAAAGCTCGTTAGGAAAGTTTATTTTTACATGCTAATTTTTATTTGTAATTATTGTAAATCACATGTA
AATAAAAATTGAGGTGTTAA

Downstream 100 bases:

>100_bases
CTAATTTGTAGTCTTCGGCGCTTCCCACATGACCCCGTCTCTGAGCATTGAATTTAAGATAACAACCATCTTTCTAATGC
ACGCAATAATAGCCACTTTC

Product: Ig-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>983_residues
MKWFQPSKASLAIAFGLASAGYVHTSYGQPAVVSVDLSKQLYVGDTTALDRNKFFNIHSSPGEPGAAEQDMLYIKNELNA
QYGRIFWGPMALNGSADYPDTEQAMLDGEQSIINAKAGAFYEFGTNRMVATEHPRSVLAPGNDPVEGARWAADYFEYYFE
DERRPLFYEPMNEPFVHASDFVDGPWDPVANEAVQRHMASWFAEIGKTFDQRGLNTNVIGFSSAWPSFELSDFSHWQSRQ
KMFMDLAGDHMDGFSFHLYDGVNVEGQDNFRSGSNAEAIIDMIEAYSHIKWGEVKDHAVTEYGGIIDGYPLEYSAAKSAQ
ELRSYNHILFSLLEREDRILTSTPFITGISKWFYDANNFNPYSATVLRPDPNKIISNKVNGYLPTEKAYFYKLWSDVKGN
RVAVDTLDPDLAVQAFNYGSTLYLALNNYEDSSKDVDLRFIYQGNSVSQVRAKRLDVPYDQAANYTDEILSSAPSSITMQ
GHETVVLEYEFAQPISPDGIVRKSSYYAQTYLQPIVENTELAFTFNDIDVGQSSMGFADVYQGVEFDQAVVDAIQTNEIN
RLTSTMRSFDRQLTNIINKHSDAWRESADFARLIQRAERSATTAKALQYHYAMHGYNASERTAILKMGVGRKHDKSKQPV
VLVNGYRVEVPNDWRGYDQTSREDFFGVIEIPVPAKFLKANTNIELIFPDTQGHVSSLILEVDTQEPLQTVAVTGLEMQK
PYVAIKKDRPYRLFANVMPQTATNKYLLWQSSDESIATVEDGLVTPIAPGFVDISAMSEDGEFSASTSVEVKDELTVRNT
IVITNDVSSMEPTNSITLDIDYSTSIDRDVAFELIGPQGNWLGLSRVTVPAGEGTTQITLSFEETLAPGTGYKIIAALRE
VGGDWRTSVDGHTITGVEIASPDAAPVPVDNLLGANGDFEQGTLGDWQRVFGSTGDVDISQEAAYNGSYGIKFDTANGRA
GISLGENVLPTALMKANKRLWRQ

Sequences:
NA

Specific function: NA

COG id: COG5492

COG function: function code N; Bacterial surface proteins containing Ig-like domains

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA