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The map label for this gene is rpoB

Identifier: 109896926

GI number:

Start: 682317

End: 686345

Strand: Direct

Name: rpoB

Synonym: Patl_0598

Alternate gene names: NA

Gene position: NA

Preceding gene: 109896925

Following gene: 109896927

Centisome position: NA

GC content: NA

Gene sequence:

>4029_bases
ATGGTTTACTCTTATAGCGAAAAGAAACGTATCCGTAAGGATTTTGGCAAACGCCCACAGGTATTGGAAATACCGTATCT
ACTTTCAATCCAGCTAGATTCTTTTAAAAAGTTTATTGACCTTGACGTCGATGGTCAGCATGGACTGGAAGCAGCATTTC
GATCAGTTTTCCCAATAAAAAGTTACTCTGGTAACGCAGAATTACAGTACGTAAGTTACCGTTTAGGTGAGCCCGTATTT
GACGTAAAAGAATGTCAAATCCGTGGTGTAACCTTTTCAGCGCCTTTGCGTGTTAAATTACGTTTAGTGTTGTTCGATCG
TGAAGCAGCACCAGGCACAGTAAAAGACATCAAAGAGCAAGAAGTTTACATGGGCGAAATTCCGCTCATGACTGAAAATG
GAACTTTCGTCATTAACGGTACTGAGCGAGTCATTGTATCTCAGTTACACCGTTCGCCAGGCGTATTCTTTGATCACGAT
AAAGGTAAAACTCACTCATCAGGTAAAGTGTTATATAACGCGCGCGTTATACCTTACCGTGGTTCGTGGTTAGACTTTGA
ATTTGACCCTAAAGATAACCTTTATGTTCGTATCGATAGACGCCGCAAATTGCCTGCGACTATCATGCTACGTGCATTAG
AAATTCCTACCGAAGAAATTCTTGGTATGTTCTTTGAGAAGAACCAAGTACGTATCGACGGTAATCGTTTCATGTCTGAT
ATCGTGCCAGATCGCCTTCGTGGTGAAACTGCACAATTCGATATTTTAGACTCGGATGGCAATGTGCTTGTAGAAGCAGG
CCGTCGTATTTCAGCTCGTCATACCCGTGCGCTTGAAAAAGCCGGTATCGTTGAACTTGAGGTACCAGCTGAATACTTAG
TTGGCCGTGTATTCGCGTGTGATTACGTGGATCAAGAAACCGGTGAACTTGTTGTTGCTGCAAACGATCTATTAACACTT
GAAAATGTTCTGGCACTTAAAGAAGCCGGATATACAACGTTTGAAACTTTGTATATTAACGAACTTGATCACGGTGCTTA
TATCTCTGACACCTTGCGCATTGATAGCTCAACTAACCGCCTAGAAGCGTTGGTTGAAATTTATCGCATGATGCGCCCTG
GTGAGCCACCAACGAAAGACGCAGCAGAAACGTTATTTACTAACCTGTTCTTCTCCGAGGATCGTTACGATTTATCGTCT
GTTGGACGTATGAAGTTCAACCGTCGTTTAGGTCGTGAAACATCTATCGGTGCAGGCACATTAGACAAAGACGACATCGT
TGACGTAATGAAGCAACTGATCACTATTCGTGACGGTAAAGACGACGTTGATGATATCGATCACTTGGGTAACCGTCGTA
TTCGTTCTGTTGGCGAAATGGCCGAGAACCAATTCCGTGTTGGTCTAGTTCGTGTTGAACGTGCCGTTAAGGAACGTTTG
AGCTTAGGTGATTTAGACGCTGTTATGCCTCAAGACCTTATTAATGCGAAGCCTATTTCGGCTGCGGTTAAAGAGTTCTT
TGGCTCAAGCCAGTTGTCTCAGTTTATGGATCAGAACAACCCGTTGTCTGAAGTAACCGATAAGCGTCGTATTTCAGCCT
TAGGCCCGGGCGGTCTTACACGTGAGCGTGCAGGCTTCGAAGTACGAGATGTACACCCGACTCACTATGGTCGTGTATGT
CCTATCGAAACACCTGAGGGACCAAACATCGGTTTGATCAACTCGCTGGCGAGTTTCGCTCGTACCAATGATTTTGGTTT
CCTAGAAACACCATATCGTAAGATTGTTGACGGTGTAGTGACTGACGAAATCGATTACTTATCAGCAATCGAAGAAGGTC
AATTCTCAATCGCACAGGCTAACGTTGTGCTTGATGAAACTGGCCGTCTTGCTGATGACTTGATCCCTTGTCGTCACCGC
GGTGAAACAACATTGAAAGAAAGCTCTGAGATCACCTACATGGATGTATCTCCGCAGCAAATCGTTTCAATCGCAGCCAG
TATCATCCCGTTCCTAGAACACGATGATGCTAACCGAGCCTTGATGGGTGCGAACATGCAACGTCAAGCGGTGCCAACGC
TTATTGCAGATAAGCCACTTGTTGGTACCGGTATGGAAAAAACAGTTGCAGTTGATTCTGGTGTAACAGTAGTAGCTAAA
CGCGGTGGTCGTGTCGACTACGTTGATGCAAGCCGTATTGTTATTAAAGTTAATGAAGAAGAAACGGTTGCCGGCGAAGC
GGGCATCGATATCTACAACTTAACTAAGTACACCCGTTCTAACCAGAACACCTGTATCAATCAGCGTCCTACTTGTAATG
TTGGTGAGCCAATTGTTGCGGGTGACGTATTAGCCGATGGTCCATCTACTGATTTAGGTGAATTAGCGCTAGGGCAAAAC
ATGCGTATCGCATTCATGCCTTGGAACGGTTATAACTTCGAAGATTCAATCTTGATCTCTGAGCGCGTTGCTATGGAAGA
TCGTTTCACCACAATTCATATTCAAGAATTGAGCTGTGTGGCACGGGATACCAAGTTAGGGCCAGAGGAAATCAGTTCTG
ATATTCCAAATGTAGGTGAATCTGCGCTGGGTAAATTGGACGAGTCCGGTGTTGTGTACATCGGTGCTGAAGTTAAAGGT
GGCGACATCTTAGTGGGTAAAGTTACCCCTAAAGGTGAAACACAGTTAACACCTGAAGAGAAACTTTTACGAGCTATCTT
CGGTGAGAAAGCATCTGACGTTAAAGATACTTCATTGCGCGTGCCTAACAGCGTTCGTGGTACTGTCATTGATGTACAGG
TATTTACTCGTGATGGCGTAGAAAAAGATAAGCGTGCACTTGAAATTGAAGGCATGCAGTTACGTCAAGTGAAGAAAGAT
TTATCAGACGAATTCAATATTCTTGCTGATGGCATCTTCGCTCGTGCTAAAAACTTGTTGATTAAATCCGGTATCGAAGA
GTCTCGTTTAGAGTCTGCTCAACGTGAAAAATGGTTCGACCTAACGCTAACAGATGAAGATGCGCAAACTGAGCTTGATC
AAATTGCTGAGCAGTTTGTTGAAATCAAAGCTGATTTTGATAAGAAGTTCGAAATCAAGCGACGCAAGATCACTCAAGGT
GATGATCTTCAACCAGGCGTTCTTAAAATCGTTAAGGTTTACTTGGCTGTTAAACGTCAAATTCAACCTGGTGATAAGAT
GGCTGGTCGTCACGGTAACAAGGGTGTTATTTCAACAATTAAACCAGTTGAAGACATGCCTTACGATGTTAACGGTACGC
CGGTAGACATCGTATTGAACCCATTGGGTGTACCGTCACGTATGAACATCGGTCAGATCCTTGAGACTCACTTAGGTATG
GCTGCTCATGGCATAGGCGTGAAAATCGACCGCATGTTAAAAGAGCACGAAGAGATGGCCAAGTTACGTAGCTTCCTTAA
AGAGGTTTACGGTGCTGGCACAACTCACCAAGAAGTGGATCTTGATAACTTCAGTGATGACGAAATTACCCGTCTAGCAG
ATAACTTGCGTAAAGGTGTGCCTATGGCAACACCAGTGTTTGATGGTGCTACTGAGGCAGAAATCAAGCATATGCTTACG
CTTGCTGATCTTCCTGAAAGTGGACAAATCGCTTTGTTTGACGGTCGTACCGGACGTGAATTTGAACGTCCAGTAACAGT
TGGCTACATGTACATGTTGAAACTTAACCACTTGGTTGATGACAAAATGCATGCTCGTTCAACTGGCTCATACAGCTTGG
TTACACAGCAGCCGTTGGGTGGTAAAGCTCAATTCGGTGGTCAGCGCTTCGGAGAGATGGAAGTATGGGCACTGGAAGCA
TACGGTGCCGCTTACACCTTGCAAGAAATGTTGACAGTTAAATCTGATGATGTGAATGGTCGTACTAAGATGTATAAAAA
CATCGTTGATGGTGATCATCGCATGGAACCTGGTATGCCAGAATCTTTCAACGTATTGTTGAAAGAGATTCGCTCACTAG
GTATCAACATCGAGCTGGAAGAGCAATAA

Upstream 100 bases:

>100_bases
TTGGTAAACGGTTAAAGTGTAAAATAAAGGGTGCTGGAAGTTTGCTTTATAGAAAATCTATTTAGCAAGTTGGGTCAAAA
ATCGGCAGGCTGAGGAACCC

Downstream 100 bases:

>100_bases
GCCGCGTCTGCAGAGCTTATAGACAGGATAGTCTGATGGGTGTTAATCCATCCATCAGGCTTTTTCAACTGACTCCGCTG
GGAGAGTAATGTGAAAGACT

Product: DNA-directed RNA polymerase subunit beta

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1342_residues
MVYSYSEKKRIRKDFGKRPQVLEIPYLLSIQLDSFKKFIDLDVDGQHGLEAAFRSVFPIKSYSGNAELQYVSYRLGEPVF
DVKECQIRGVTFSAPLRVKLRLVLFDREAAPGTVKDIKEQEVYMGEIPLMTENGTFVINGTERVIVSQLHRSPGVFFDHD
KGKTHSSGKVLYNARVIPYRGSWLDFEFDPKDNLYVRIDRRRKLPATIMLRALEIPTEEILGMFFEKNQVRIDGNRFMSD
IVPDRLRGETAQFDILDSDGNVLVEAGRRISARHTRALEKAGIVELEVPAEYLVGRVFACDYVDQETGELVVAANDLLTL
ENVLALKEAGYTTFETLYINELDHGAYISDTLRIDSSTNRLEALVEIYRMMRPGEPPTKDAAETLFTNLFFSEDRYDLSS
VGRMKFNRRLGRETSIGAGTLDKDDIVDVMKQLITIRDGKDDVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERL
SLGDLDAVMPQDLINAKPISAAVKEFFGSSQLSQFMDQNNPLSEVTDKRRISALGPGGLTRERAGFEVRDVHPTHYGRVC
PIETPEGPNIGLINSLASFARTNDFGFLETPYRKIVDGVVTDEIDYLSAIEEGQFSIAQANVVLDETGRLADDLIPCRHR
GETTLKESSEITYMDVSPQQIVSIAASIIPFLEHDDANRALMGANMQRQAVPTLIADKPLVGTGMEKTVAVDSGVTVVAK
RGGRVDYVDASRIVIKVNEEETVAGEAGIDIYNLTKYTRSNQNTCINQRPTCNVGEPIVAGDVLADGPSTDLGELALGQN
MRIAFMPWNGYNFEDSILISERVAMEDRFTTIHIQELSCVARDTKLGPEEISSDIPNVGESALGKLDESGVVYIGAEVKG
GDILVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRVPNSVRGTVIDVQVFTRDGVEKDKRALEIEGMQLRQVKKD
LSDEFNILADGIFARAKNLLIKSGIEESRLESAQREKWFDLTLTDEDAQTELDQIAEQFVEIKADFDKKFEIKRRKITQG
DDLQPGVLKIVKVYLAVKRQIQPGDKMAGRHGNKGVISTIKPVEDMPYDVNGTPVDIVLNPLGVPSRMNIGQILETHLGM
AAHGIGVKIDRMLKEHEEMAKLRSFLKEVYGAGTTHQEVDLDNFSDDEITRLADNLRKGVPMATPVFDGATEAEIKHMLT
LADLPESGQIALFDGRTGREFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEA
YGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGDHRMEPGMPESFNVLLKEIRSLGINIELEEQ

Sequences:
NA

Specific function: NA

COG id: COG0085

COG function: function code K; DNA-directed RNA polymerase, beta subunit/140 kD subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA