Definition Pseudoalteromonas atlantica T6c chromosome, complete genome.
Accession NC_008228
Length 5,187,005

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Identifier: 109896818

GI number:

Start: 564933

End: 567278

Strand: Direct

Name: Not Available

Synonym: Patl_0489

Alternate gene names: NA

Gene position: NA

Preceding gene: 109896817

Following gene: 109896820

Centisome position: NA

GC content: NA

Gene sequence:

>2346_bases
ATGAAAAAAACCGCTAAAAATAAGTCTAAATCCAGCCAGTCAGGGGCATCATCCAAGCTCAGGCATTTACACCCTTGGGC
GTGGCTTAAGCGCAATTGGTGGCGCTTACTCATTATTTTGACCGCCGTTGTAGCTGCATACGGAGTGTATTTAGACGCAC
AAATTGTGAAGCAATTTAGTGGTAATAAATGGCAGGTGCCTGCTCAAATTTTTGCGCGCCCGATGCATTTTGAGCTTAAA
CAAGAGATAACGACTCAAGAGATAGTTGAGGAACTAGAACTACTTGGTTATCGCAAAGTACGCCACGCAGACGATACCGG
AGAATATCAATTAAAGGCCTCAGGGGTACGTATTCAACGTCGTGCTTTTCATTTTCCTCATGGCAAAGAATCTGAAGTCG
CACTGGACATAACACTGGCCAATGGCCGGGTTGCAAGCTTACGCAATTTAGATAATAACCAAGCCTTAAATGACGTTTAC
TTGGAGCCTTGGCTTGTGACTCGCCTAATGAGCAGTGGGCGAGAAGATCGCATGTTGGTCAATTTAGACGGCGTACCGCA
GTCCCTTATCAAGGCGTTGGTGTTGGTTGAAGATAAAGACTTTTACAAACATTATGGTATTGCACCGCTTTCTATATTAC
GCGCACTTATTGCCAATGTATCCGCAGGGCGAGCGGTTCAAGGCGGCAGCACTTTGACCCAGCAATTGGTTAAAAATCTG
TTTTTAACCAATGAAAAGTCACTGGTACGCAAAGCTAAAGAAGCATTAATGGCGTTGATTATCGACGCACGTTACAGCAA
AGATGAAATTATCGAAGCGTATCTCAATGAAGTTTTTCTCGGTCAAAATGGCAACACAGGTGTACATGGTTTTGGTTTAG
CCAGCTTGTTTTATTTCGACCGTCCGATTGCTGAATTAAACGTAGCGGAAATAGCGACCTTGGTTGGTATCATAAAAGGG
CCGTCTTATTACAATCCAAGACGTCATCCTGAGCGAGTCATTGAGCGTAGAAATTTGGTACTGCGTATCCTATTTGAAAA
CAACGAACTGCAAAGAAACGAATACGAATACGCTATTAATCAACCTCTTAATTTGGCAACCGGGGCAAGTTTAACCTCTG
GAAAGCACCCTGCCTTTATGAGCATGGTGCGCAGAGAATTAAAAACGGTTTTGTCGGACCCAAACATGCGAGAGTCTGGT
CTGAAAGTCTTCACGACCTTGGACTCTGTGGCCCAGAGAAAAGCCGAACAAGCCCTAAAAGTGGGAGTGAAAGCCCAGCA
AAAGCGTATGAAACTGACCGCTTTGCAAGCAGCTATGGTGGTAACGGATATTAAAAGCGGTGAAGTACGCTCCATCGTCG
GTGACGTTAATCCGCAATTTCAAGGCTTTAATCGGGCACTCGACGCCAAAAGAGCTATCGGTTCACTGATAAAACCTGCC
ATTTACTTGACCGCATTAGAGCGTGCGGCGCAATATAATTTGGCGACTCCGTTAAAAGACGAACCCATTAGCTTAAAAAG
TACCTATGGAAAAATGTGGGAGCCGAAAAACGCCGATAAAAAATTCCGCGGTCAAGTCAGTTTAGTGGAAGCGTTAACAC
AATCCTTGAATGTTCCAACGGTAAACTTGGGCATGGAAGTCGGGCTAGACGATATTGCTGCCACCGTGGAGCGTTTAGGC
GTGAACGAGCCGATGGATATCTATCCAGCAATGACGTTAGGGGCGGTGAATTTATCTCCTATTCAAGTCAATCAGATGTA
TCAAACCATCGCAAACAATGGGCGATTCATTCCTTTGCACGCGGTAACGGCCGTTTTATCTCCGAAGAACAAGCCATTAT
GGCGTTTTAGTGCAAGAGGGGAGCAGCGAGCAGATCATAAAGCCACTTACTTATTAAACTACGCACTACACAAAGTGACG
CGTGAAGGGACGGCAAGACAGATAAAACAAACCTTCGGCGATATCAATATGGCAGGTAAAACCGGCACCACAGATGATTA
TCGTGACAGTTGGTTCAGCGGATTTGATAATAATATTTTAGTAACCAGTTGGATGGGGAAAGACAACAACGAACCTATTA
ATTTGAGCGGTGCCAGTGGTGCTATGCAGTTATTTATTGGTTACCAGAAGCTGCAGCAACCTAAGTCATTCGTCAGGCGC
TATCCTAAAGGGTTGGGTATTGCCCATTTTGAAGAGCAAAGCGGTGCGCTTAGCCGCCCAGGTTGTGCTAATACCATTAG
TGTTCCGGCGATTTTGGACGCCCTTCCTCCTGTGCCAAAAACCTGTAACGGGGAAGTACGAGGCCCACTCAAGAAATCAC
TATGGGAAAGGCTGTTCGGTAACTAA

Upstream 100 bases:

>100_bases
CTCTTTTTCTCTTATCCATCAACAGATAAATACCATTGTTCATCTCAATAATACGGGATTTGAGTAACGGTGCGATATTT
AAGGTGATTTACAAAATATT

Downstream 100 bases:

>100_bases
GCGTTGACCCGCAAGGTTAGTTGTTTTTTTTGTCTTTCATGGCAGGTAGATGGGCTGTTTTATTCAGCCTGTCTTGGATA
AACGATTCAGCACCATTGGT

Product: penicillin-binding protein 1B

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>781_residues
MKKTAKNKSKSSQSGASSKLRHLHPWAWLKRNWWRLLIILTAVVAAYGVYLDAQIVKQFSGNKWQVPAQIFARPMHFELK
QEITTQEIVEELELLGYRKVRHADDTGEYQLKASGVRIQRRAFHFPHGKESEVALDITLANGRVASLRNLDNNQALNDVY
LEPWLVTRLMSSGREDRMLVNLDGVPQSLIKALVLVEDKDFYKHYGIAPLSILRALIANVSAGRAVQGGSTLTQQLVKNL
FLTNEKSLVRKAKEALMALIIDARYSKDEIIEAYLNEVFLGQNGNTGVHGFGLASLFYFDRPIAELNVAEIATLVGIIKG
PSYYNPRRHPERVIERRNLVLRILFENNELQRNEYEYAINQPLNLATGASLTSGKHPAFMSMVRRELKTVLSDPNMRESG
LKVFTTLDSVAQRKAEQALKVGVKAQQKRMKLTALQAAMVVTDIKSGEVRSIVGDVNPQFQGFNRALDAKRAIGSLIKPA
IYLTALERAAQYNLATPLKDEPISLKSTYGKMWEPKNADKKFRGQVSLVEALTQSLNVPTVNLGMEVGLDDIAATVERLG
VNEPMDIYPAMTLGAVNLSPIQVNQMYQTIANNGRFIPLHAVTAVLSPKNKPLWRFSARGEQRADHKATYLLNYALHKVT
REGTARQIKQTFGDINMAGKTGTTDDYRDSWFSGFDNNILVTSWMGKDNNEPINLSGASGAMQLFIGYQKLQQPKSFVRR
YPKGLGIAHFEEQSGALSRPGCANTISVPAILDALPPVPKTCNGEVRGPLKKSLWERLFGN

Sequences:
NA

Specific function: NA

COG id: COG0744

COG function: function code M; Membrane carboxypeptidase (penicillin-binding protein)

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA