Definition Pseudoalteromonas atlantica T6c chromosome, complete genome.
Accession NC_008228
Length 5,187,005

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Identifier: 109896743

GI number:

Start: 486270

End: 488621

Strand: Direct

Name: Not Available

Synonym: Patl_0414

Alternate gene names: NA

Gene position: NA

Preceding gene: 109896742

Following gene: 109896744

Centisome position: NA

GC content: NA

Gene sequence:

>2352_bases
ATGACAACAATAACATCCTCTATTTTTACCGTTAGTAAGCTAGCCCTTCTTGTTGCAGGGGTTATTGGAACGAATGCTTA
CGGGCAGACGTCACGTAATCAGCATCAAATCGAAGAAATTACCGTGACGGCGCAAAAACGCGATCAGTCAATTCAAGATG
TGCCTGTCAGTATCAGTGCCTACGATGGTGCGTTGCTTGAGAGTTTAGGGGTTGCCGAGCTCGACACCTTATCCGAAATA
ACCCCTGGTTTGGTGATTCAAGAACAAAGCCCGAACAACCCGGGTTTCGTTATTCGGGGGATTACCTCAGACAGTGGTTC
GTCACAGGCGGCGCCTCGTGTGTCGATTTACTATAACGGTGCTGACGTATCCCGCTCTCGGGGCTCGTATTTTGAATTGT
TTGATATAGAGCGTATTGAAGTGGTTAAAGGCCCGCAAGCGACCCTGTTTGGCACGGCAGCATCAGTGGGGGCGTTAAGT
GTTATCACCCGTAAACCCCAAGAAGAATTCGGTGCAGAAATAAAGGCCAGTGTGGGCAATTATTCAGCTGAAACCCTCAG
TGGGTTCGTGACTGGCGGCAATAGCCAAGTGCAGGGGCGATTGGCCTTTAGCTATCGCCAGCGTGATGGTTTCATTCGTA
ATATTGCAGGGGAAGCGGGTTCGCAAAACCCTGACGGATTCGATCAGGAAGACATGCATGGTATTGAGCGCACAGCGTTT
CGCCCGTCGCTACGTTTTACACCCAGTGATGAGCTGACCATAGACTTAGTTTATACCCACGAAAAAAATGACGACACGGG
AACATCGTTTAAAAATGGCTTATTTGCACCCACTGGTGGCGATACCAGCGCATTTAGTTTTGTGGAAATGTCAGGTAGTC
CATTATCCCAAGAGGTGTTTGGCCGCAAAGATTTGGGCGTAGAACGCACCGTTGACGATCTGAACCTAACGGTTAATTGG
GACATTAACCAAGACTTAACGTTTACCTCAATTTCCGCTTCTCGTCGCTTTGATTCACTGGAAGTATTTGATGCCGATGG
CACGCAAGCGTGGTTCTTAGAATTTGCTGAAGATGCCACTGGCGATCAATTCAGCCAAGAATTTCGCATGATTCATCAAG
GTGACAAACTGACTACTATCGCCGGTGTGAGCTATTTCACCGAAGACGGTAGTCAAGCAGTGCCATTTAGCTCAGAGGAA
TCTGTCTTTTTGAACTGCCTAGGGGCCTTTGCTGCTCTTGCGCAGCCATGCGTAGCAAACGATGGCTCTGTTCCTGTGCT
CACGCCCATTTTAACTGAAGGGGCTGCTCAGCTTTTGCCGTATCGTTTAGAGTTTGAAAACTACGGCGAGACCGATGCTT
ACTCGGCGTTCGCTGATGTGACTTATGCCGTGAATGAGGCGCTAGAGCTAACCGCCGGTTTACGCTATGTGCGTGAAGAC
AAAAAAAGTGGTTATCGCTCAGATGCGCCTGCAAGTGTATTAACTGGCAGTGAACTGTTTACCGTGGACACAGAAGGTCA
GATTTTCCGTGCTGAAGAAGACTACGATGATTGGTTGCCACGCTTTAATATGTTGTACGTCTTAAATGAAGACATCAATA
TGTACGCGACCATTTCTAAAGGTCGCCGCTCTGATGTGTTGAATGTGACGTCAGTTCGCGGGGAAGATGGCTCGGGTGAG
AAGTCTGTTACTGAAATCCCAGCTGAGATCATCTGGAACTACGAAGCGGGCATCAAAGGACAAGCGTTCGATAAATCTGT
GAATTATAACGCCTCGGTGTTTTATCAAGACTATTCAAATTTCCAAGTTACTTTGTTAGATGACGAGGGCGTGGCATATG
CCGCAGATGCTGGCTCGGCGACCAATGTTGGCGCTGAAGCAGAAGTGCGTGCCCTGTTAGGTGCTGATTTTGAGCTATTC
GCTAATCTAGCTTATTTAGATGCAACCATAGACGACGACAGCACAAACGGTGACCTAGCGGGCAATCGCTTTCGCTTGCA
GCCGGAATGGACAGCCAGTGTCGGCATGTTCTACGCGACTGCACTTTCGCAAGGTTATAACCTAACGAGTTCTTTAGTGT
ACAGCTACCGCTCAGACGTGTTCTTTGAACCGGCGAATGCACCAATATCAGGTTTAGACATCAGTGAAGATTCCGTCAGC
TTAGTCAGTGCCCGCATCGGTATTGCAGGTGCGGATGAAGATTGGGCAGTAAACTTGTTTGCCAGTAACTTGCTTGATAA
AGAATATCTAGTGGACGCAGGTAATACCGGTGGCGGCTTTGGCAACCCAACTTTTGTCGCGGGGGCCCCACGCTTTTACG
GCATCGAGTTCAAAATGCGTTTTGGCGAGTAG

Upstream 100 bases:

>100_bases
GGTTACGTCATCTATTTGTCATAAAATGGTCATGTAAGTTTCGCATTTACTGAGTACCTTTGCTGCGCTTATATCGCAGT
CACTCTTAAATGGAACACAC

Downstream 100 bases:

>100_bases
ATAAACGTATGACCCGCGCTCTGTGCAAGTATGCACAAGAGCGTCAGTAACAATTGAAAGCCTGTACCCCGTTTCAGCAC
GTCGCTAAAACGGGGTTTTT

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>783_residues
MTTITSSIFTVSKLALLVAGVIGTNAYGQTSRNQHQIEEITVTAQKRDQSIQDVPVSISAYDGALLESLGVAELDTLSEI
TPGLVIQEQSPNNPGFVIRGITSDSGSSQAAPRVSIYYNGADVSRSRGSYFELFDIERIEVVKGPQATLFGTAASVGALS
VITRKPQEEFGAEIKASVGNYSAETLSGFVTGGNSQVQGRLAFSYRQRDGFIRNIAGEAGSQNPDGFDQEDMHGIERTAF
RPSLRFTPSDELTIDLVYTHEKNDDTGTSFKNGLFAPTGGDTSAFSFVEMSGSPLSQEVFGRKDLGVERTVDDLNLTVNW
DINQDLTFTSISASRRFDSLEVFDADGTQAWFLEFAEDATGDQFSQEFRMIHQGDKLTTIAGVSYFTEDGSQAVPFSSEE
SVFLNCLGAFAALAQPCVANDGSVPVLTPILTEGAAQLLPYRLEFENYGETDAYSAFADVTYAVNEALELTAGLRYVRED
KKSGYRSDAPASVLTGSELFTVDTEGQIFRAEEDYDDWLPRFNMLYVLNEDINMYATISKGRRSDVLNVTSVRGEDGSGE
KSVTEIPAEIIWNYEAGIKGQAFDKSVNYNASVFYQDYSNFQVTLLDDEGVAYAADAGSATNVGAEAEVRALLGADFELF
ANLAYLDATIDDDSTNGDLAGNRFRLQPEWTASVGMFYATALSQGYNLTSSLVYSYRSDVFFEPANAPISGLDISEDSVS
LVSARIGIAGADEDWAVNLFASNLLDKEYLVDAGNTGGGFGNPTFVAGAPRFYGIEFKMRFGE

Sequences:
NA

Specific function: NA

COG id: NA

COG function: NA

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA