| Definition | Pseudoalteromonas atlantica T6c chromosome, complete genome. |
|---|---|
| Accession | NC_008228 |
| Length | 5,187,005 |
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Identifier: 109896706
GI number:
Start: 429709
End: 432060
Strand: Direct
Name: Not Available
Synonym: Patl_0377
Alternate gene names: NA
Gene position: NA
Preceding gene: 109896705
Following gene: 109896707
Centisome position: NA
GC content: NA
Gene sequence:
>2352_bases GTGAAAGCCCAATTTAAATTATTATTGTTAGCTACATCTATAGCCAGCGTTTTTAATCCTTTATCCCTTAATGCGCAAGA AAAAAGCACGGATACTAAACAAGAAATAACTGAAACAGAAGAGTCACAAGGCATTGAAGTGATAATGGTTTCTGCGACTA AGCGGTCTGAGAGCGTGCAAGATATTCCACTTTCAGTCACCGCTTTTTCGCAGCAACAACTTGATATCAAAGGTGCTTCA TCGCTTACGGGCATTCAAGAGTCTACACCCAATCTAAATTTCTCGGTGCAATCAGCTGGGCAAAACGTGGCGCGCGTTAC ATTGCGTGGTGTCGGTACTGAAACCTTAGTCGGTGGCGGAGACCCCGGCGTTGCGCTGCACATTGACGGCATTTACGTTG GGCGAAATTCAGCGGCTGCCGCTGACGTATTTGATGTAGACAGACTAGAAGTGTTGCGCGGTCCGCAGGGCACTCTATAT GGACGAAATGCCACGGGTGGCTCTGTCAATATCATTACTAAAAAGCCAACTGACGAGCTTGAAGGCTCAGCTGATTTAAC CTACGGCAACTACAACGAAGCGCGCGTACGCGGCGTAATCAATGTGCCCTTGAGTGACAACCTGTATTCGCGCATAACTA TGCTGTCAGAGAGTCACGATGGTTATATTAAAAATTTATATGAAGGCGGCCGAGATGTGGACGATAAAGACAGCCAGAGC GGTCGCGCACAGCTACTTTATTTAGCCGACTCTGGGGATGAATATTTACTTAGAGGCTACTACTCAAAAACTGGAGGCGC AGGCCCAGGTTCGCAATATTTAGGCACGGATATAAACACAGAAAACGGCTATCCCTCGGCGTATCTAATTGGGGTGTCTA GTGCAGGAGTCGGTGGTGCTGTATTAGCGGACGCATTTGGATTGGCGACCACGGCGACAGGAGACTCAGTTTTACCATTA CCTACAGATCTTCACGAAGTCAGAAAAGATGCTCCTGAGTTTACTGATACCTTAATTCAGGGGATTGATTTTGATGCTAG CATCAATCTTTCCGACACCTTATTGCTTAAATCTATTACCTCTTATCAAACCAATGATAATCAGATATTAGTAGATGCGG ACAGCTCAGAGTTACCCCTTGAAACTCGTAACCGTAACAACATGGCTAAACAATACAGCCAAGAATTCAATTTAATTTCT CAAACTCTTGGCCCTTTTCAATGGATATTAGGTGCCTACTATTACCATGAAGAATTAACCGAGCGCTTTGAAGTCATTAC CCCTTCTGGGCTAGTGCCTATCGATACACAATTAGGCGAAGGGGCTGTCGCTGGAGGGGGCGGCATAACACAGTTACGTA TTGCCAGCCATGAGGTTGATTCAACAGCGTTATTTGCTCAGCTTTCTTATGAGTTAAATGATGAGTGGTCGGTAACAGGC GGGCTACGCTACACCCGCGACGAAAAAACACAATCCAGGGAAATAGGCGGCCAGGTCGATATTACTAACAATGTTCAGTT TTTGAGCGGTGATATCGGGCCATTAGGGCCTGACAGCGGGACCACTTCTTTTACCGAACCGACGTATCGTATCAGTACTG ATTATGAACTGAGCCCAGACAATTTGTTATTTGCTAGCTATGCCCATGGTTATAAATCGGGAGGTTATGATCTCAACGGT GGTGAGGTTACAGATGAAGGTGAGCAAGTGCCTTACGAGCCTGAGTTTGTTAACGCGATTGAAATAGGCTCGAAGAACAA GTTCTTCAATAACAAGATGATACTCAACTTAACGGCTTTTCGTTATGACTATGAAGACTTACAGGTGTTTCGACTGTTAG CAACCGGGCCGGTTACCGATAACGCAGCCCAGTCAACGATCCAAGGTGTTGAGCTGGAGCTCAAAATTGAGCCCACAGAT AATGTTAAGTTTGATGGCTCAGTAGGCTATTTGGATGCCACATACGATGAGTATTCTATTGATATCCCGCCAACTGACTT TTCCGGTAATCGCTTGAACTACGCCCCTGAATGGACCGGCCACATGGGCGCAGAATATGTAAAAACCATAGGTGAGGGCG ACCTAATTACTCGAGTTGATTGGTCATACCGTTCAGACACTTACTTCGACCGTGCAAACACGGACCTAGACATGCAAGAA GCTTATAGCTTGTTCAACGCGCGCGTACGTTATGACACCGAGAAATACTACATCGATCTGTGGGCTAAAAACCTAACCAA CGAAGACTACGTGACGGGTCAGGTGATCAACCCGCCATTTACCTGTGGTTGTCGTACGGTGAACGTGGGGGCGCCTAGAA CGTATGGGGTCACAGTCGGCGCGCGTTTCTAG
Upstream 100 bases:
>100_bases AAACGGTAGCGCCAAATTGGGTGAGTCACTTGGACGCTATTTTAAGAATGAATAAAAAATTGATCTTCAACTTAATAATA AAATCCAAGGAGAACACACG
Downstream 100 bases:
>100_bases CTCGGCATGAATTAGGTTTAGCGGGCGTTTCATTGCGCTAGCGGGTTACAGTCTATTTACCTTTAGGACTGTGCTCGCCT TAATAAATTGCCAAATCCGA
Product: TonB-dependent receptor
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>783_residues MKAQFKLLLLATSIASVFNPLSLNAQEKSTDTKQEITETEESQGIEVIMVSATKRSESVQDIPLSVTAFSQQQLDIKGAS SLTGIQESTPNLNFSVQSAGQNVARVTLRGVGTETLVGGGDPGVALHIDGIYVGRNSAAAADVFDVDRLEVLRGPQGTLY GRNATGGSVNIITKKPTDELEGSADLTYGNYNEARVRGVINVPLSDNLYSRITMLSESHDGYIKNLYEGGRDVDDKDSQS GRAQLLYLADSGDEYLLRGYYSKTGGAGPGSQYLGTDINTENGYPSAYLIGVSSAGVGGAVLADAFGLATTATGDSVLPL PTDLHEVRKDAPEFTDTLIQGIDFDASINLSDTLLLKSITSYQTNDNQILVDADSSELPLETRNRNNMAKQYSQEFNLIS QTLGPFQWILGAYYYHEELTERFEVITPSGLVPIDTQLGEGAVAGGGGITQLRIASHEVDSTALFAQLSYELNDEWSVTG GLRYTRDEKTQSREIGGQVDITNNVQFLSGDIGPLGPDSGTTSFTEPTYRISTDYELSPDNLLFASYAHGYKSGGYDLNG GEVTDEGEQVPYEPEFVNAIEIGSKNKFFNNKMILNLTAFRYDYEDLQVFRLLATGPVTDNAAQSTIQGVELELKIEPTD NVKFDGSVGYLDATYDEYSIDIPPTDFSGNRLNYAPEWTGHMGAEYVKTIGEGDLITRVDWSYRSDTYFDRANTDLDMQE AYSLFNARVRYDTEKYYIDLWAKNLTNEDYVTGQVINPPFTCGCRTVNVGAPRTYGVTVGARF
Sequences:
NA
Specific function: NA
COG id: NA
COG function: NA
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA