| Definition | Pseudoalteromonas atlantica T6c chromosome, complete genome. |
|---|---|
| Accession | NC_008228 |
| Length | 5,187,005 |
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Identifier: 109896664
GI number:
Start: 389502
End: 391949
Strand: Direct
Name: Not Available
Synonym: Patl_0334
Alternate gene names: NA
Gene position: NA
Preceding gene: 109896661
Following gene: 109896665
Centisome position: NA
GC content: NA
Gene sequence:
>2448_bases ATGAAAATGACACCTATTGCCTGTGCAGTTTCGATACTTTTTGCCACCCCATTAATGGCCCAAGAAGCAAATACGGAAAC CCCTGACAATGATGAGTATGAAAATATTATTGTTACCGGTTCTAGTGTTGCACGTACTGAAGCAGACACCCCAGCCAAAA CGACCTTGATTGGTAAAGACCAAATCGCCAACACAGGGTTTTCGAGTCAAGCTGACATACTCATGAGTGTTCCCGGTATT AAAGTAGAGGGGGGCGGGGGTGAAGTCGCAACCAACGCATTCGTTCGTGGTTTACCTTCTGGTGGTCAATTTCAGTTTAC TCCCCTTAATTACGACGGCATGCCGGCATTCCAATCTGGCATGACATCGTCAGCACAAGATGTTTACTACCGTCCTGACA TCGGCATAGAAAGAGTCGAGTACGTGGGTGGTGGTGTGTCTAACTTGTTTGGCCCAGGTTCAGTGGCCGGCATTATCAAC TATATTTCGCGTACGGGCAGTGACGATCCAGAAACCACAGTGCAGGTCGAAATCGCCGAAGAAGGCCGAGTTAGAACAGA CTTCTATAATAGCGGCGCGTTATCCAGTGATGAAAACTTGTATTACGCGATCTCTGGTTTCTATCGTTACGATGAAGGCC CGTTAGAAACAGGCTTAGAAACCAAGGGTTACCAGCTTAGAGGTAACATTCGTAAAGAATTCGACGATGGCCATATTACC TTCCACGGTCAAATGATTGATGACCAAGTGCAGTTTTTCCTTCCTTTACCCCTTGAAGGTGACAGCCGCGAGCGTTTAAC CGGTAATGATGGCGAAACCGTCTATGTGGCACAAACCGTTGCCGCAGCCGATTTACGTTACGACACAGCCGATGGCACCT ATGAATCACCTATTCGAAATGGTGTGCTCACAGAGGGTGGTTCATTCGGTGTTGATTTTGAGAAAGAGTTAACTGACAAC TGGCGCTTAGCGGGTAAGGCAAAAGTCGCCAGCTATGACCACCAGTTCAACCTATTCTTGGATGGCGACGGCATTGCCAA CACGCCAGAGACGCAAGAAGGTTACGCGAATAACCTAGGTCGCACCGCAAACGGTGACGTTTTAAGCTCACTAGGCAGCG CTAACTATACATGGTCTGAAACCGGCAATGCGTTACCAGAAGATTACTTGTTATTCGGTAACCGCTTATTAGATCGCCAG CGCGACGGTGATTTCTTCAGTACTGAATTCAACTTAACAGGTGACATAGAGGCAGGCGGATTCGACCATACCGTGAATAT CGGTACCTTCTTCATCAACTCATCGCAGATGGATTACAACATTATCTCCAGCTATTTAGCCGATTTTAGCAATGGCGACA GCGCGCGCTTGGTTGACTTGTCTTTCACCAATGAAGCGGGTGATACAGTGCAATATTCGAAAAACGGTATTGTCGGGCCA GGCACAAGTTACACCAATAAAGATTTAACCAGTAAGCGTATGGCGTTTTACGTAACGGACCAGATGGAAAATGACCAATG GGCACTCGACGTCGGTATGCGTGTTGAACGTGCTGAAGGGACAACTAAATCTGAAGGCAGTGAAGTGGTTGTGGTAAATG ACGACCCATCATTAGCACCGAACTTACAAGTTAACACCACAGGTAACGGGCGTTTTACTTACGGTGAAGTGGCTACAACC GAAGCGGCATTCTCGGCGGCTGTGTTGTACAAAATGGATGATCAAGACCTGAACCTATACGCGAATGCGTCAACCGGTTA TTTCTTCCCGCAAATCAGAAGTATCACGTTTAACGAAAACGGTGAGCCACAAAGCTACGAGGGCGAAGATATTACCCTGG GCGCGATTGGTTTTAAGTATTTCCCAGAAGATTTATACATAGATGCGTCATTGTTCATAGCGAACTTGGATAATCGCCGT TCAGTGGACTTCGAAAATGATGGCTCAGGCGGATTACTAGAAGTGGTGAAGCAGCAATCAACGGAAACCACAGGCGCTGA AGTGATTACTCGCTGGAATATGACAGACGAAGTGATCCTTGAAGGTAACGTGACCTATCAAGACGCTGAATTTAGCGAAG GCGGTAACGTAGGTAAGCAACCAAGAAGACAGCCTGAGTTCTCGGGTAATCTTGCGGTTTCTTATAACAATGGCTTTGTT GATGCGCGCTTAGGTTTGAGTTACTTCGGTGATGCTTACGCGAACGACGATAACTCAGTCGAACTGGATAGCCACACTAT TGCGACCTTAAGTGCCGGTTATTCTTGGGAGCTAAATAACGATCAGCAAATTCGTGTCGGCGTCAGTGTGTGGAACTTGT TCGACACTGACGGCATTACCGAAGGCTCACCTCGTCAAGGTAACAGCCAAGTGTCGGGTGGCGAGTTCTTCGTGGGCCGC CCAGTGCTACCACGCAGAGTGAGCTTAACAGCACGATATGATTTCTAA
Upstream 100 bases:
>100_bases AAATTAATAACATTAAATGAACGTTCGCCACATTAATAACGAATAAGTGACGAATACACACCATTGACATTGACCATCTT AAAAAGAGTTGGAGAACACC
Downstream 100 bases:
>100_bases AGTAAGTTTGTGTGTACTGGCGCTTCCTTGCGCCATTTAGGTTGAATAGCTTGCTCACTGAAAGGTATCTCAGTGAGCAA CTATTCACCGTTCTTTCAAT
Product: TonB-dependent receptor
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>815_residues MKMTPIACAVSILFATPLMAQEANTETPDNDEYENIIVTGSSVARTEADTPAKTTLIGKDQIANTGFSSQADILMSVPGI KVEGGGGEVATNAFVRGLPSGGQFQFTPLNYDGMPAFQSGMTSSAQDVYYRPDIGIERVEYVGGGVSNLFGPGSVAGIIN YISRTGSDDPETTVQVEIAEEGRVRTDFYNSGALSSDENLYYAISGFYRYDEGPLETGLETKGYQLRGNIRKEFDDGHIT FHGQMIDDQVQFFLPLPLEGDSRERLTGNDGETVYVAQTVAAADLRYDTADGTYESPIRNGVLTEGGSFGVDFEKELTDN WRLAGKAKVASYDHQFNLFLDGDGIANTPETQEGYANNLGRTANGDVLSSLGSANYTWSETGNALPEDYLLFGNRLLDRQ RDGDFFSTEFNLTGDIEAGGFDHTVNIGTFFINSSQMDYNIISSYLADFSNGDSARLVDLSFTNEAGDTVQYSKNGIVGP GTSYTNKDLTSKRMAFYVTDQMENDQWALDVGMRVERAEGTTKSEGSEVVVVNDDPSLAPNLQVNTTGNGRFTYGEVATT EAAFSAAVLYKMDDQDLNLYANASTGYFFPQIRSITFNENGEPQSYEGEDITLGAIGFKYFPEDLYIDASLFIANLDNRR SVDFENDGSGGLLEVVKQQSTETTGAEVITRWNMTDEVILEGNVTYQDAEFSEGGNVGKQPRRQPEFSGNLAVSYNNGFV DARLGLSYFGDAYANDDNSVELDSHTIATLSAGYSWELNNDQQIRVGVSVWNLFDTDGITEGSPRQGNSQVSGGEFFVGR PVLPRRVSLTARYDF
Sequences:
NA
Specific function: NA
COG id: NA
COG function: NA
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA