Definition Pseudoalteromonas atlantica T6c chromosome, complete genome.
Accession NC_008228
Length 5,187,005

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Identifier: 109896613

GI number:

Start: 327666

End: 329345

Strand: Direct

Name: Not Available

Synonym: Patl_0282

Alternate gene names: NA

Gene position: NA

Preceding gene: 109896612

Following gene: 109896614

Centisome position: NA

GC content: NA

Gene sequence:

>1680_bases
ATGTCCTCCAAAAATATTGACCTAGTTAACTTGCGCCAAACCTTGTTTGCGCTGTTAAAACCAGAACGTTCTTTTTTCGC
TGTCGTCATCGCTTATAGCGTAGTGATTGGCCTATTGACATTAGCTGTGCCAATCGCCGTACAAACCTTGATCAACACCA
TAGCCAATATCGCTTCAACGCGCGCGGTCATTACCCTTGCCATCGTGTTGTTTAGTACTTTGCTGCTGTCGGGGTGTTTC
GCAGCGCTACGCATGCGGGTGATGGAGTATTATGAACGGCGCATCTATGCACGCTTAGTCGCTGATCTAAGCTTGCGCAC
TATCTTGGCTCCCCATAGCTACTTTGAGGGCAGCCAAAACACATCAATCACCCATCGTTATTTCGACATCATGACATTGC
AAAAGAACGTCCCTAGTTTGATGGTTGATGGTATCGCATTGATCTTGCAGATGATTGTCGGTTTTACTCTGGTTTCTTTT
TATCACCCATTTCTGCTGGCATTCAACTTGTGCGTCATTTTAATTATGTATGCAATCTGGCGACTCTGGTCAACTCAAGC
AAAGGTTACAGCGGTGCGCCTATCTGAGTCTAAGTACACGACTGCGAAATGGTTGAGTAACTTAGCATCAGCAAACGACT
TTTTAAAATCGTCTTCGCAATTTGATTATGCAGGCAAAAAAACCGAGCGCTACGTTTCAGAGTATGTGGATAATCACTCT
CGCCACTTCTCATTCACCTTTAAACAAGTCGTTATGTTTCTGGTGCTTTACGCACTGGCAAGCTCGGCTTTGCTTGGTTT
AGGTGGTTGGTTGGTCATTATTGGTCAGTTGTCCATCGGGCAATTGGTTGCCGCAGAGTTGATTATGGCCGCAGTATTCT
TAGGGCTGTCTAACTTCAGTCATTATTTAAAGTTGTATTACGAGCTATATGGCACCGCAGACAAAATTGGCGGCGCTATC
AACATACCTCAAGAGGCGTTAGAACAAACATCCAAACCTGCGCCAGCTGGCGGCGCACTTGATTTCAATAAGGTGATTAT
TAAGCGTAAAAGCGAATCATGCCTTATCGACAAACAAATCGCACAAGGGGATAAATACTTTGTCTCTACTCAGACCAATT
GGACCCAGCGCAGCATAGTTAACTTACTCAAACGCTATGAGGTTCCCTCTTCTGGGTGGATAAATCTTGATAATAGCGAC
TTGTCTGATTACGACACCTACGATTTACGCCAAGCCGTATTTGTATTAGACCGCTCATTAATTATCGAATGTACTATCGA
AGAATACATACACATGTGTGTTCCCGATGTAACCACCAGTGAGATAAACGCCACCATAGAAAGAGTCGGCTTAGCGGATG
TGATCAGTTCGTTGCCGCTAAAGCTCAAAACGCCAATTTCGTCGGTAGGCACACCTTTGCAGCCACTTGAATTTATCTTA
CTAAAGTTAGTCGTGGTGATGCTTTCTAAGCCAAAAGTGCTGGTCATCAACCAGCATTTCGATGCGATCCCGACCATCAG
ACGAGAGCGTATTTTAGGCGTGATAGAAAGAACAGATCTAACCGTATTGTATTTTTCGAATGCACCAACGCCGGCATTTT
TTAATGGCATTATTGAGTTAGAAAGCAAAAAAGAGCCCCAGCCCAATGTAAATACAAGTCAGGAGGCAGAACATGAGTAA

Upstream 100 bases:

>100_bases
TTACCTTTCACTGTAGAGTTTTCCTGTGGTAGCTCAGTTTTTATAAAGTTAACAACATTGAAATTGACCGTGTATTGACG
CCATAAAAGACGAGCCAAAA

Downstream 100 bases:

>100_bases
CGCCCATACTGATTTCATGGGGGCCATGAAAACGCTGAAAAGCTTGAAAGTCCCTAAAACCCATACAACCATTATCTGGC
TGGTCGTAACCTTAGTCATC

Product: toxin secretion ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>559_residues
MSSKNIDLVNLRQTLFALLKPERSFFAVVIAYSVVIGLLTLAVPIAVQTLINTIANIASTRAVITLAIVLFSTLLLSGCF
AALRMRVMEYYERRIYARLVADLSLRTILAPHSYFEGSQNTSITHRYFDIMTLQKNVPSLMVDGIALILQMIVGFTLVSF
YHPFLLAFNLCVILIMYAIWRLWSTQAKVTAVRLSESKYTTAKWLSNLASANDFLKSSSQFDYAGKKTERYVSEYVDNHS
RHFSFTFKQVVMFLVLYALASSALLGLGGWLVIIGQLSIGQLVAAELIMAAVFLGLSNFSHYLKLYYELYGTADKIGGAI
NIPQEALEQTSKPAPAGGALDFNKVIIKRKSESCLIDKQIAQGDKYFVSTQTNWTQRSIVNLLKRYEVPSSGWINLDNSD
LSDYDTYDLRQAVFVLDRSLIIECTIEEYIHMCVPDVTTSEINATIERVGLADVISSLPLKLKTPISSVGTPLQPLEFIL
LKLVVVMLSKPKVLVINQHFDAIPTIRRERILGVIERTDLTVLYFSNAPTPAFFNGIIELESKKEPQPNVNTSQEAEHE

Sequences:
NA

Specific function: NA

COG id: COG2274

COG function: function code V; ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA