| Definition | Pseudoalteromonas atlantica T6c chromosome, complete genome. |
|---|---|
| Accession | NC_008228 |
| Length | 5,187,005 |
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Identifier: 109896592
GI number:
Start: 304753
End: 308532
Strand: Direct
Name: Not Available
Synonym: Patl_0261
Alternate gene names: NA
Gene position: NA
Preceding gene: 109896591
Following gene: 109896593
Centisome position: NA
GC content: NA
Gene sequence:
>3780_bases ATGAGGCTATTGAAATATTTAGGCATATTCCTTTGCGTTTTGGTTTTGTTAATCGCTGTAATTGCATCGCCTTGGGGTAC AAGAGGCGTGCTGTCCATCGCTGATAGCAGTGTAGACGGGTTGGACATCGATTACGATTCAGGCAGTTTGCTTTCTGAGC TGTCGCTCAAAAGGTTAGTATTCTCGACGCCAGATTTAAGCTTGCAGATCAAAAAACTAGCCGTCGATGTTAATTGGTCT TGCGTGGCTACGATGCAAGCATGCCTATCTGAGCTTAGGGCGCAAAGTATTGGCGTTAACGTCACCCCTAGCGAATCGTC TGAGCCCGAAAGTACTGAACCGTTAGGGCGTATCACGCTGCCATTGCCGGTATCCGTGGATCATTTAGACGTGCGTAACA TTCGAATCGACGTGGTCAATACAGTAGGTGTAACAATACGGTCTGTATCCAGTGAGCTCAGCATGTTCCGTACTTTGCAC ATCGACCACTTGGCAGTTAATGGTATTCGCGTTGAGTTACCTGAGGCCAGCCCTGAAGCGAAGTCCACTGATAATCAACT GTTAGACTTGCAAACAATCGCCAATTGGCAATACACGCCGATAACGCTGCCGGCTATTGTGTTTCCAATTGTTATGCGCG GAAATAATTTGGCGCTGGATGACCTAGTGGTTTCTCAAGGCAAAGCGTCGCTTATTGATATCACGAAGCTGCGAGCAACC ATCAATATTACCCCTAAATTACTCACGGTGAAAAAGTTGCAGCTAAGCTCTAGCTTAGGGGAGGCAGACTTAACCGCTAC CCTGGGTAAGCAATGGCAGCACCAAGCAACGTTGTTGTTCAATACTACTACCAATAGCCCATATCCTATGAACGCTAAGC TGAATCTCAAGGGGAATTTGCAGCACAGCGAACTTAAGCTCAATACCACCGGCTTAGTTGACTTAACGGCCAGTGCTAGC GCTGATTTGCAGTCAAAGCAATTACCTCTTGCTCTTGAGGTCAATTGGCAGCCAGTCGAGTGGCCGATAAAGCAACCACA ATTACTGATTGAAGAAGGCCAGCTGACGCTGTCTGGAGATATTAACCAGTATAAATTGGCCTTAGATACCGCCCTCAAAG GCGCTTCAGTCCCCCAATCGACATTGACCGTGCGCGCTGCGGGCAACAATCGCCAAGTGCAGCTTACTCGATTGGCCATC GATACCCTTGGGGGGCAAATACAGGCGTCAGGAAATGCCACCCTAGATACCTTAGCAAAATGGCAAAGTCAGCTTCAGTT TACTGATATTCAACCCCAACGCTTTTGGCCCAAACTGGACGCTAATATACAAGGCGAGCTTAGCCTTGACGGGCAATATG ATGGCCAAAACATACTGGCCCAGATGCGTGATCTTGTTGCATCTGGCAAATGGTTAGATTATCAGTTAAGTGCTTCTGGC GAAGCGAACTTTGACTCACAAGAAGGGCTTGAAATCCCCGAATTGTTGGTTAAAACAGGTGACAATCAAATCACCCTTGT CGGTTCATTAGAGGCCTTTGAAGACGTACAGGCGCAATTGACTGTCGACGCGCAAGACTTATCTCAGTTGTATCCCTCAT TTGCTGGCAGGGCAAAGTTTGAAGCGCAAATAGATGGCACAATCTCTGCCCCTGAGGCCAACTTTAGTGGCTCTGCTGAT AACATCGATATACCCGATATGCGTATCGCACAACTCGCGACCAAAGGGCAGGTTATTTGGGATGCTCAGAAACAAGCCAA CATCGAATTGCAACTTAGCAATAGCGTTATTAGCCAGCAAAGAATAGCGAATTTAAATGTGGCTTTGAACGGTGATGCAC AGGATCACCAACTGAGTTTATCGCTTAATAGCAACATGGCTGACGTCGTGACTAAATTGCACGGAAGTCTGTTGGATAGC CATTGGGATGGCGCGCTAGATGTACTTACCTTTGCCTCAGATGCAGGCCAATTTGGTTTAGAGGATGAGGGGCCTAGCAT ATCCGCTAATTGGGCGACTGATGAATATCGTGTCGCGCCACTCTGTTTATCTGATAACGATGCTCGCGTGTGCATTCGCC TTGCTGAGTATGCAGCCACTGGTGCCCAGTTTGATCTGGCGATTGACGACTTACCCTTAGCTCCATTGCTAAGCGCTAAC TTAGCGCAACTGCAAAAGATAGATACCGATGCCAAAGTAAACTTAGTGGCTAAAGGCGATTGGGACACAAAAAAACTGCC TATTATTGAAGCTAATATCAGTTTAACGCCCTCAACCTGGACGGTAGAGGGGGCGAGTACACCCCTTGAGTTAGATGTGC TTGACATGCGTGTTAACACCATAGTCGATAAAGTGGACGCTAAAACCGCAGGTAAAAATGACCCACCTCAGCATGTAGTT ACGCAGTTGACACTGCAAAGTAAGCAATTAGGCGAGGTGCACTCAAATGTTGACTTGCAATTAAATGACCAAGACAAGCC GCTTTCTGGTCAGCTAACGTTAAGCAATATTACCCTAGGTGCTGCAGCCCAATTTGTACCGCAATTGACTGAACTCGCTG GGCGTATCGATGGCCAAATAGAGCTCGGCGGAAACTTAACCGCGCCATTAATCAAAGGAGAGGTAACGTTAGTTGAAGGT GCCCTCGCGGGCTCAATGCTGCCATCGCGTATTCATCAGGTTGAGCAAGTTATTACGTTTACTGGGCAGGCGGCGACGCT GAGCGGGCCATTCCAACTGGGCAACGGAGAGGGCCAAATAGACGGTGAGTTCAGTTGGCAAGATACCCCTAGCGCGACAG TGAACGTTAAGGGAGATGAAATGGAAATCGACTATCAGAATATCGTCAGGGCTAAGTTATCGCCTGACATCAATGTGCAA TTTGGGGAAGCAGGATTATCGGTTAAAGGAGAAGTCACTTTACCCTACGCCCGTATTAAGGTGAGGGAGTTGCCACCCAG TGCTTTATCACCTTCTAGTGATGTGGTGTTGGTGAATCATGAGCAAGTCGCTAAAGAAAACAGTTTACCGCTGGATTTAT CTCTACAAATTAACATTGACCCAGACAAAAATAATGACGTCAAAGTGGATGCATTCGGTTTGACCTCAGACTTAGAAGGC GCATTGTTATTAACGCAAGCTGGCGAAGTCCTTAATGCTAACGGTGAGCTGAATTTGGTCAATGGTCGCTACCAAGCTTA TGGCCAAGATTTGGTGATACGAGAAGGAGAAATTCAATTTAGCGGCCCGATAGATAGCCCATATCTTGCGGTGGAGGCAA TTCGAGATCCTAACAAAACCGCGGATGATGTGATTGCAGGCTTGCGAATTCAAGGCAGCGCGTCAGAGCCTCAAGTCAGC GTATTTTCAGATCCAAGTATGGAGCAGCCAGAGGCGCTTTCGTATCTGTTGCGCGGCACTGCAATCAATAGTACTGATGA ATCCTCAAGCGACGGGGCACTGGCCAGCGCGTTAATCGGGTTTGGTTTAGGTAAAAGTGAAAACAAAGTGACTAATATCG GGCGCAAACTGGGCGTAGAAGATCTCGCTTTAAATACCAGTGGTACGGGAGACGAAACCAAGCTTTCGGTTTCTGGTTAT ATCGCGCCTGGTGTGCAAATTCGCTACGGTGTAGGGGTGTTTGACTCTGTTTCAGAAGTTGCTCTGCGTTACCAGCTATT GCCAAAACTGTATCTGGAAGCGGTGAGCAGTTTAAACAGCGAGCTGAACTTATATTATCAATTTACTCTTGATGACAAAG AAGAGTCAAAGCCCGAGTAA
Upstream 100 bases:
>100_bases GCTGGGTTTCACCTGTTGGACCAATACGTTTTTATTTTGCGCGAGGTAACAGTGTGGAAGAAACCACATGGCGCTTTCAT TTTTCCATGGGGCCTGCATT
Downstream 100 bases:
>100_bases CTTACAGAAAAACTAATTATGTTTCGAACGGGCTAGCATTTTTACCTCAGTAACTGTACTGGATTGGCGCGTAATTTATT CAATAACCTACCGATAACGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1259_residues MRLLKYLGIFLCVLVLLIAVIASPWGTRGVLSIADSSVDGLDIDYDSGSLLSELSLKRLVFSTPDLSLQIKKLAVDVNWS CVATMQACLSELRAQSIGVNVTPSESSEPESTEPLGRITLPLPVSVDHLDVRNIRIDVVNTVGVTIRSVSSELSMFRTLH IDHLAVNGIRVELPEASPEAKSTDNQLLDLQTIANWQYTPITLPAIVFPIVMRGNNLALDDLVVSQGKASLIDITKLRAT INITPKLLTVKKLQLSSSLGEADLTATLGKQWQHQATLLFNTTTNSPYPMNAKLNLKGNLQHSELKLNTTGLVDLTASAS ADLQSKQLPLALEVNWQPVEWPIKQPQLLIEEGQLTLSGDINQYKLALDTALKGASVPQSTLTVRAAGNNRQVQLTRLAI DTLGGQIQASGNATLDTLAKWQSQLQFTDIQPQRFWPKLDANIQGELSLDGQYDGQNILAQMRDLVASGKWLDYQLSASG EANFDSQEGLEIPELLVKTGDNQITLVGSLEAFEDVQAQLTVDAQDLSQLYPSFAGRAKFEAQIDGTISAPEANFSGSAD NIDIPDMRIAQLATKGQVIWDAQKQANIELQLSNSVISQQRIANLNVALNGDAQDHQLSLSLNSNMADVVTKLHGSLLDS HWDGALDVLTFASDAGQFGLEDEGPSISANWATDEYRVAPLCLSDNDARVCIRLAEYAATGAQFDLAIDDLPLAPLLSAN LAQLQKIDTDAKVNLVAKGDWDTKKLPIIEANISLTPSTWTVEGASTPLELDVLDMRVNTIVDKVDAKTAGKNDPPQHVV TQLTLQSKQLGEVHSNVDLQLNDQDKPLSGQLTLSNITLGAAAQFVPQLTELAGRIDGQIELGGNLTAPLIKGEVTLVEG ALAGSMLPSRIHQVEQVITFTGQAATLSGPFQLGNGEGQIDGEFSWQDTPSATVNVKGDEMEIDYQNIVRAKLSPDINVQ FGEAGLSVKGEVTLPYARIKVRELPPSALSPSSDVVLVNHEQVAKENSLPLDLSLQINIDPDKNNDVKVDAFGLTSDLEG ALLLTQAGEVLNANGELNLVNGRYQAYGQDLVIREGEIQFSGPIDSPYLAVEAIRDPNKTADDVIAGLRIQGSASEPQVS VFSDPSMEQPEALSYLLRGTAINSTDESSSDGALASALIGFGLGKSENKVTNIGRKLGVEDLALNTSGTGDETKLSVSGY IAPGVQIRYGVGVFDSVSEVALRYQLLPKLYLEAVSSLNSELNLYYQFTLDDKEESKPE
Sequences:
NA
Specific function: NA
COG id: COG2911
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA