Definition Pseudoalteromonas atlantica T6c chromosome, complete genome.
Accession NC_008228
Length 5,187,005

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Identifier: 109896459

GI number:

Start: 152568

End: 155183

Strand: Direct

Name: Not Available

Synonym: Patl_0128

Alternate gene names: NA

Gene position: NA

Preceding gene: 109896458

Following gene: 109896460

Centisome position: NA

GC content: NA

Gene sequence:

>2616_bases
TTGGGCGGCCCCGCACTCGACTCGACAGCCCACTTTACAACATTGGTTTTTATGATTAACGAAGAATATATGACACAAAT
GAAGACATTACCCCTAACTGGAACATGGCAGTTTTGCCAAGCCGATAAGCAAGACTGGCGAAATGCAGAGGTTCCAGGGT
GTAATTTTACTGACTTGCTCGCTCACAATTTAATAGACGATCCGTTTGACCGAGACAACGAATCCCATTTGCAGTGGATT
GAGAAAAAGGACTGGCATTATCGCCGTTCATTTAATGTATCAGCGGCGCAATTGGCCCACAGCGAGGTTAATCTAGTCGC
CCTAGGGCTGGATACGTTTTGTGATATTTATCTCAATGGGCAGCACCTCGCTAGCGGGCAGAATATGTTTGTGGGTCAAC
ACCTTGCTTGTAAGTCTTTGCTGGTAGAAGGTGAAAATGACGTGGAAATTCGTTTTCGCTCACCCATGAACGAAGTGTAT
CCACAATTTATAGCTAACGGTTTTACCTACCCAGCGGAAAACGACAAAAGTGACGAGAAGCTCAGTGTCTTTTGTCGCAA
AGCACCTTGTCATTTTGGTTGGGATTGGGGGCCGAAGTTCGTGACGTCTGGCATTTGGCGCGACATTTATTTAGCGTTTA
TCGACAGTGCTGAAATCAAAGACGTACATTTTGTACAGCAGGCGTTGTCAGCACAGCGCGCTGATTTTCATTTTGCATTA
GACGTCAGCGCGATGACAGATTTTGATGCCCAACTAGTGGTGAAGTGCGAACAGGCCCCGCAGTTGAATCAAACCTTAGA
TGTGCGTTTAACGGCCCAGGCTAACGAGCAAAGCATGCTGGTTAACTTCACGCTTACCGATCCTAAGCGCTGGTGGCCTA
ATGGGTTAGGGGAGGCATTTTTATATGACTTTAGCTTTGAGTTAGTCAAGGATAAGCAGGTTATAGCCCGTCGCGAGCAA
GCTGTGGGGCTGCGGGAAATAGAAGTGGTAAACCAAGCTGATGAAATGGGGGAGTCATTCTATTTCAAAGTAAACGGTCA
CCCCGTCTTTATGAAAGGCGCGAACTACATTCCGGATGACAGTTTTATTCATCGAGTTAATACCCAGCGACATGAGCAAG
TGTTTGATGCCGTGGTGGCAGGCAATATGAATATGTTGCGAGTGTGGGGCGGCGGCATTTATCAAGACGATGCTTTTTAC
GAACTAGCGGATCGCAACGGCATTTTGATTTGGCAAGACTTCATGTTTGCCTGCACTTTATACCCAGCAGATGACGCGTT
CTTGGCAAATGTGAAACAAGAAGCGGAATATAACGTTAAACGTTTGCGTAACCACCCGTGTATCGCTATGTGGTGTGGCA
ACAACGAAGTCGATATGGCCATCGAAAAATGGCAGTGGGCTGAAAAGTTTGGCTATTCTGATGAGCTGTACGGGAGACTT
AAACAAGATTACATACGTTTGTTCGATGACTGCTTACCCAAGGTCATTAACACGCTTGATGCGCAGCGCTTTTATTTGCG
TTCTTCACCCATAGGTTTTTGGGAAAACGACGAAGACAACAAAGCTAATCATCACTACTGGGGCGTATGGCACGGTGAAG
AGCCGTTCAGTGAATATAAAAAGCGTGTGCCACGCTTTATGAGTGAATACGGTTTTCAGTCGTTTCCTATTGCTGAATCA
ACCCACACGTTTACCCGGCCTGAAGATCGCGAACTTGAATCAGCCGTGATGCAGGTGCATCAAAAGCACCCGCGTGGCAA
TAAGCTTATCCGTAGCTATATGGATGAAGAGTTCAATGCGCCGAGAGATTTCGATCAGTTATTGTATTTAAGCCAAGTTC
AACAAGCCCTTGGATTAAAAATGGCGTTTGAAGCGCATCGCAAAGCCATGCCATTTTGCATGGGAACCCTGTATTGGCAA
TTGAATGATACTTGGCCGGCTGCGTCATGGTCTGGTATCGATTATTATGGTCGTTGGAAGGCGCTGCACTATCAAGCGAA
ACGCAGCTTTGCCCAACAATTATTGGTGATTGACCAAGTGAATGATCAGCTTGAGGTCACCTTGATTTCTGATGATTTAC
AGCCTTTTTCCGCTCAATTGCACATTCAAGTTTATGACTTCGATGGGTTGGTGGTGTATTCCCATGAGCAAGATGTGCTT
GTGCCGGCTAATGCGTCTTTGTCGCTTACTTCGCTTGCTATGTCAGAACTTGCCTCACAAGCTCAGCCCAGTAGCTCTGT
GTTAGTTGCGCGCTTAATGCATCAAGATGGCCGAGTGCTTAGCCAAAATAGTCACTTTTTTGTAGCCAACAAGGACTTGG
CCTTGCAAGCTGCTGATATACAGTGCGAACAGGTTATTACGCCTGAGTGTTTAACGCTGACGTTTAGCAGCGACACTTTC
GTTCGTCAGTTGTATGTCAGTGCCGGCGAGCAAGTCGGCAATTTTAGTGATAACTTTTTTGATCTGATCCCCGGAATCGA
CGTCTCGATTCACCTTGCGCTGCCGGGCCTAGATCAACAAGATATTGAGCGCCTTGGGGCTAAGGTAAGCTGGCAATCGC
TACTTGATAGTTTTGCTTCATTAAGCAATGAGCAACGTAATATAGCTGGGTTATAG

Upstream 100 bases:

>100_bases
GACCCTGTTCTACAGTTATATCAAGGCGTTAATGACACTTAGCTCGACTCTTACCAAGCAGCGTTTTACACAGCAATAAT
TTCATCGTGGGGATGACTCA

Downstream 100 bases:

>100_bases
CGATGATTTTAAGTTGGATAGATATACTCGTTATCATTGGTTATTTAGTACTGGTGTTAATGATCGGTTTGTACATTTCA
CGGCGTGCTAGCCGTGACAT

Product: glycoside hydrolase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>871_residues
MGGPALDSTAHFTTLVFMINEEYMTQMKTLPLTGTWQFCQADKQDWRNAEVPGCNFTDLLAHNLIDDPFDRDNESHLQWI
EKKDWHYRRSFNVSAAQLAHSEVNLVALGLDTFCDIYLNGQHLASGQNMFVGQHLACKSLLVEGENDVEIRFRSPMNEVY
PQFIANGFTYPAENDKSDEKLSVFCRKAPCHFGWDWGPKFVTSGIWRDIYLAFIDSAEIKDVHFVQQALSAQRADFHFAL
DVSAMTDFDAQLVVKCEQAPQLNQTLDVRLTAQANEQSMLVNFTLTDPKRWWPNGLGEAFLYDFSFELVKDKQVIARREQ
AVGLREIEVVNQADEMGESFYFKVNGHPVFMKGANYIPDDSFIHRVNTQRHEQVFDAVVAGNMNMLRVWGGGIYQDDAFY
ELADRNGILIWQDFMFACTLYPADDAFLANVKQEAEYNVKRLRNHPCIAMWCGNNEVDMAIEKWQWAEKFGYSDELYGRL
KQDYIRLFDDCLPKVINTLDAQRFYLRSSPIGFWENDEDNKANHHYWGVWHGEEPFSEYKKRVPRFMSEYGFQSFPIAES
THTFTRPEDRELESAVMQVHQKHPRGNKLIRSYMDEEFNAPRDFDQLLYLSQVQQALGLKMAFEAHRKAMPFCMGTLYWQ
LNDTWPAASWSGIDYYGRWKALHYQAKRSFAQQLLVIDQVNDQLEVTLISDDLQPFSAQLHIQVYDFDGLVVYSHEQDVL
VPANASLSLTSLAMSELASQAQPSSSVLVARLMHQDGRVLSQNSHFFVANKDLALQAADIQCEQVITPECLTLTFSSDTF
VRQLYVSAGEQVGNFSDNFFDLIPGIDVSIHLALPGLDQQDIERLGAKVSWQSLLDSFASLSNEQRNIAGL

Sequences:
NA

Specific function: NA

COG id: COG3250

COG function: function code G; Beta-galactosidase/beta-glucuronidase

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA