Definition Pseudoalteromonas atlantica T6c chromosome, complete genome.
Accession NC_008228
Length 5,187,005

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Identifier: 109896453

GI number:

Start: 142237

End: 145131

Strand: Direct

Name: Not Available

Synonym: Patl_0122

Alternate gene names: NA

Gene position: NA

Preceding gene: 109896452

Following gene: 109896454

Centisome position: NA

GC content: NA

Gene sequence:

>2895_bases
ATGAACAACACCAGTGACAAAATATTCGGTAAATCAATGCTGAATTTTGCGGTTGTGTGTGCAATGGGTCTTGTACCTTC
GTACGCGTTAGCACAGCAGACAAACCAAGAGCCCAGTGGCAGCGATGCAGAAACTGAGGTCATTCAAGTACGTGGTATTC
GTGCTTCAGCTGCAGAAAATTTAGCAATCAAGCGATTGTCGAACGCGGTAGTGGATGCCATCACGGCAGAAGATATCGGT
AAGTTCCCAGATAAAAACGTTGCGGATTCTTTGCAGCGTGTACCTGGTGTTGTTATTCAGCGCAACGGCGGCGAAGGTTC
AAGTGTGAGCATACGTGGTTTATCGCCTAGCCTGACGTTTACCCAATTAAACGGTAACTTTATTGCAGCCTCTTCTGGTA
ACCCGTCTCGCTCGTTCTCCTACGAGTTACTGCCTTCAAACTTAGTCGGTAAGGTCGAGTTATTTAAATCGTCTGAAGCC
CGCCTCGATGAAGGCGGTATCGGCGGTACGGTCATAGTACATAGCCGTAAACCGCTAGACATGGATAAAAACTCGGGCGT
AGTTAGCCTCGAATACACTTATGCAGATATTACAGATTCCTACGAGCCTCAGCTAAGTGGTATCTATTCTTGGAAGACTG
ACGAAGAAGACTTTGGTTTTTTGGTGGGCTTTACACAGCAAGACAGAACCAACCGTACTCAGACTTCTCGAGTCAATATC
ATCAATCAAAACTTTTTGTATACCGAGCGTCGCAACGGTCAAGAGATTGAAGGCGGTGCCCAAGGATATGCGCGCCAAAG
TTTAGTTCAAGAAGTATTAGAAGAAGATCGCGAGCGCACTGGCGTGCAGTTTACTGCGCAATGGCGCCCCACTGATAATT
TAGAAGTTGGCTTCAACTACTTTCAATTCAAACTCGGCTTAGATTCGGTTTTACACCAACTTGAATACCCTGAGTGGCAT
GATACCAACCAATTTTGGACGGACGTATACGTTGATGCAGAAGCGCAATACGTCACAGGTATTGACTACGCCAGAGGCGT
TTCAGGAGAAGCGTTAGATACGCAAATTCCCCGCATGAACGGCGAGTACGTGGTTGAAGAGTCTACGTCTGACACGTTCG
ACTTTTTCATGGAATACGAAGGCGGCGACTTTAATGTGAAATTTGTTGCTGGTCATACAGAAGCTGAAGGTGGGCCGACT
GAAAAGTACCGTGCCGCATATTATTCTGGTAGTACTGCAGATTATTGGGGCTGGCGTTTTGAAAACGAAAACCTAGTCAC
TAATATTGATCCAGAAATGTTTAATCGCTTAAAGGCCGGTGAAGGTGGTGAAGCGGATATAGGCGCCACGGATTCAAGCT
TTGTTGGCGGGACTCAAGAAGAAGATTACGCCCAGATTGATACGGATTGGTTTGTTGACTGGGGCATAGTTGAAACGCTG
CGCTTTGGTGTGAAGTATCGTAAAGGCTCTATTCATCGTGACACACGCAATACCTACTATCTAGCCAAAGATTTTGATAT
CGCAGCAGGTGAAGCACGTCCTGGCGGGATCACGCTGGATGATGATTACTCACGTAATGGCGGTATTCCACTGCTTACCA
CTGTGATTGCTGACCAGCCTTTAGGAAACTTAGGTGGGTCAATTAATACGAACTTGTTCCCGGTTGTGAACTGGAACAAA
TATCAAAATGAGTTAGAGACCAATTTCCAACGTTACACCCGTTTTGAACCCGACTTTGTCTATGACGTAGAAGAAGAGGT
TAAAGTTGCTTACGTGCAAGCTGATTATCGTTGGGAAAATTTCCGCGGTAATTTTGGCGTACGTTTTGTAGACACAGTTA
ACACCAACACCGCCAGTGATCGTTTGGAGTTTCGCTTAGACCGCGTCAATCTTGACGGAGATGACGTTGCCCAAGTTAAC
GGTATTGTGCGCGACGTGATTGTTAACCCTAAAGAAAATTCATACAGCCACGTTCTGCCTAGCTTTAACATCGCCTGGGA
TATCAACGATGATTGGGTATTGCGCGGCGCAGCAGCGAAAGTGTTATCACGCCCTGATTATGCTGATTTAGGCCAATTCC
AAACATTGACCTACAACTCAAGTGAGTGGGAAGCAGATTCTAGCGATCGCCCAGATTATGATCCCCTGCGTGACAGTGAA
GGCTGGACAGGCAGCGGCGGTAATTCATCGCTACGTCCTCTTGAATCAGTGCAATACGACTTATCACTAGAGTACTACTA
CGGGGAAGGCTCGGGCGTCAGCTTGGCTGTGTTCTTAAAAAATATTGATAATTTCGTTGTGCCATTCACGTTAGATGTGA
ACAGCAGTGTTCCTGATCAAACGTTTACCTTGGTCGAGTCAGGTGGTGGTACGGTCAATGTTGGTGGAGACATATTGGTA
CGTGATTTCGACACCGCGGCCAACGGCACTGATGCTGAGTCTAAAGGGGTTGAGTTCTCATTCCAGCATTTCTTTGAAAA
CGGCTTTGGGGTATCGGGTAACTACACACGCAATATCACCAGCGCCGCTACCGTTGAGGCTGATGGTCGCCTAGTGGGTG
AATCGCCATTAACGGGCAGCTCAAAATATCAAGGTAACTTCTCGGCCTTTTATGAGAATGACGATTACAGCCTTCGCGTT
TCATATAACCGCAGAGGCCCAACAATTGGAGTACTGGCCGAAGATTGGGACATCAACCGTTATAGCGATACCTATGATCA
AGTTGACGTAAACGCCAGCTATAACATAAACGAAGATATCACCTTGAGCGCCTCGGTTATCAATCTGACTAAATCAGAAG
ATTACGTCCATTTAGGGGATGACACCAAAGTACGCTTCTTAACTAATTCGTACAGCGGGCGTCGCTTCTTTGCAGGCGTC
AATTACAGATTTTAA

Upstream 100 bases:

>100_bases
AACAAAGAAAAAATAAGCGGTTACTAAAGTGGGCTGTGACACATGTTCACGGTTACATTTGGTTAAACGGAAATATCCGA
TGGCGATTAGGAAAACACAT

Downstream 100 bases:

>100_bases
TGCGTCAGACCGGCTCGTAAGAGTCGGTTAAATGGAAACGTAAAAGACAGATTGAATAGAGGAATAATAATGAAAAAGCT
CAAAATGAATAAAACCACAG

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>964_residues
MNNTSDKIFGKSMLNFAVVCAMGLVPSYALAQQTNQEPSGSDAETEVIQVRGIRASAAENLAIKRLSNAVVDAITAEDIG
KFPDKNVADSLQRVPGVVIQRNGGEGSSVSIRGLSPSLTFTQLNGNFIAASSGNPSRSFSYELLPSNLVGKVELFKSSEA
RLDEGGIGGTVIVHSRKPLDMDKNSGVVSLEYTYADITDSYEPQLSGIYSWKTDEEDFGFLVGFTQQDRTNRTQTSRVNI
INQNFLYTERRNGQEIEGGAQGYARQSLVQEVLEEDRERTGVQFTAQWRPTDNLEVGFNYFQFKLGLDSVLHQLEYPEWH
DTNQFWTDVYVDAEAQYVTGIDYARGVSGEALDTQIPRMNGEYVVEESTSDTFDFFMEYEGGDFNVKFVAGHTEAEGGPT
EKYRAAYYSGSTADYWGWRFENENLVTNIDPEMFNRLKAGEGGEADIGATDSSFVGGTQEEDYAQIDTDWFVDWGIVETL
RFGVKYRKGSIHRDTRNTYYLAKDFDIAAGEARPGGITLDDDYSRNGGIPLLTTVIADQPLGNLGGSINTNLFPVVNWNK
YQNELETNFQRYTRFEPDFVYDVEEEVKVAYVQADYRWENFRGNFGVRFVDTVNTNTASDRLEFRLDRVNLDGDDVAQVN
GIVRDVIVNPKENSYSHVLPSFNIAWDINDDWVLRGAAAKVLSRPDYADLGQFQTLTYNSSEWEADSSDRPDYDPLRDSE
GWTGSGGNSSLRPLESVQYDLSLEYYYGEGSGVSLAVFLKNIDNFVVPFTLDVNSSVPDQTFTLVESGGGTVNVGGDILV
RDFDTAANGTDAESKGVEFSFQHFFENGFGVSGNYTRNITSAATVEADGRLVGESPLTGSSKYQGNFSAFYENDDYSLRV
SYNRRGPTIGVLAEDWDINRYSDTYDQVDVNASYNINEDITLSASVINLTKSEDYVHLGDDTKVRFLTNSYSGRRFFAGV
NYRF

Sequences:
NA

Specific function: NA

COG id: NA

COG function: NA

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA