The gene/protein map for NC_008228 is currently unavailable.
Definition Pseudoalteromonas atlantica T6c chromosome, complete genome.
Accession NC_008228
Length 5,187,005

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 109896391

GI number:

Start: 70215

End: 72662

Strand: Direct

Name: Not Available

Synonym: Patl_0060

Alternate gene names: NA

Gene position: NA

Preceding gene: 109896390

Following gene: 109896392

Centisome position: NA

GC content: NA

Gene sequence:

>2448_bases
ATGCGAATCTTCGTCAGTTTACCGTGGAAAATCATGGGTCTATTGATTGGTTTTTTACTGATTGCCAGCGTGTTGTTGAC
CTTCATTTGGATTGATAAAAATAACCAGGATTATCTAAGTCAGCATCAGGCGTTACATGATGAAGATCTAAGTCAAATGC
ACCTGATCCGCGACATGTTGAGTAATCGTCTCGAGTTATGGTTTGAGTCGTTTATTCACCTGCATGAAGACATCACTGAT
AATCCGCAAGCGACTGCCGATTTTATTAACGAAGAATTTGATTACTTACAGTTGAATTGGCAAGTTAAGGATCTTTGGTT
GCTCGACAGCGAGTACAAAGTCATATTCGCTAATCATCAACATGTGCCAGAATATGTAACGGCGAGTGCACAGCAAACAC
TGCAAAATCAATCATCTACGTCCAATATTTTATGTGCACAGTCATGTTTTCAGCTTATAAGCATGCCAATTTTGGCTGCC
AACGGTGAGCTTCTGGTATTGACCGCTACCACCTCTTTGCTGGAAATGATGGCTGCCTTGAATCGTTCAACGCTGGCTGA
ACTTGCCTTAGTCGCAAATATACATTCCCTCGAGCTGGCTTCTCTTCGAGACGCACAGATACAGCCGCCCATCTCAAATA
TTAGACGCCAAGAACTTAGCGCATTACTCAAGCTAATTCCTGGGGGTATTACATTCGATATGGTGCTGGATAAAGGCTAC
CGATTGGTGGTCAATGAGCAGGCATATTTGATTAATTTACTGCCCGTTGATGAAAAGGTGACTGACCCTGCATATCTGCT
TGCCGTGCACGATATCAGCGACGAGTGGGCAAGGCATGATAGTTATCAATTCGGTGTCATTATCATCTCAGCTATTACAG
TGGCACTTTGTATTCTGACGTTCTTTTTAATGGCCGAGCGGCTGCGTAGACGCCTACTTATCGTTGCAAAGCGTTTACCG
CTTTTAGCACAGAAGGAATACGACGAATTTAACGCCATGCAATTTCCACATAGTAGACTGTTTTTAGATGAAATAGATGA
GGTCCAACGCTCTTCAAATTTATTGGGTGAACAGCTTGAGTCGATGGATGTCAAGATAGAACAAAACACCCGAGAACTTG
AAAATATAGCCATGTACGACCGGCTTACGGGGCTTCCAAATCGAAATATGCTGAATTTTGTGCTGCGCAAAAAAATAGCG
TCTTTAGCGCGTAACCCTGAACCTTTGGTCGTTATTCTATTGGACTTCGATAATTTTAGGAAAATTAATGACAGTTATGG
TCACGGCATTGGTGATGAGTTCTTGATTATCGTCGCCCAGCGATTGCGCAGCAATCTGCGCGAATCAGACGTGATCAGCC
GCTTCGGTGGTGATGAATTCGTCATTGTGCTGCAAGAGGTTGATGAGGTCAGTAATGCCATGACCTTAGCCGAAAAGCTG
GTGACTAAGTTTAGAGAGCCTATTGAGATCGGCGCTCAACGTTTTTATACCTCTGTGAGTTTGGGGATCACCTCTTGTGA
CGAACAACATCTCACTGTGGATGACTTGGTGCGCCAAGCGGATATTGCTATGTATGCTTCAAAAGATGCTGGCGGAGACC
GCTTTACACTTTTCAATGAAGGCATGAGCACGCGGGTCATGCGCCATATTGAAATTGAGCATGATATTCGAGACGCACTG
CAGCAAGAACAGTTCAAGTTCGCGCTACAAGCACAAATAGACATTGGTACCGGCAAGCTGGTGGGATTCGAGGCACTGAT
CCGTTGGCTGCATCCGAAAAATGGTTACATCATGCCTGATGAATTTATTCCTATTATGGAAAATTCTGAAAGCATGATCA
CCTTAGGTTACTGGGGTATAAAGCGCGCGTTTGCTATTTTGGCACATCTTGAAAGCATGGGACTGAGTGGGTTGAGAGTA
GCAGTAAACTTATCTGCGAGTCAGTTTTTAGATCCTAATTTAATCAATTTTATGCGCGAACAATTAGCAAAAAGCGAGCA
AGGTGCAGAGCAAATTGAATTGGAATTGACTGAGCGCACAGTGGTTGCTGACATCAGTCATACGCTGCGGATCATGTATC
AGCTCAAGGAATTAGGGTTTAGTTTTTCTATTGATGATTTTGGCACAGGGTATTCGTCTCTCGCATACCTATCTCAGCTA
CCGGTAGATATTATTAAAATCGACCGCAGCTTTATATCCGGTATGAGTGTAAATAGCGCAGACAAGCAGATCGTGAAATC
AACCATCGCTATGGTCAGAAAACTAGGTATGAAGGTTGTCGCTGAAGGAGTAGAGACAGCGGAGCAATTGAATACATTAG
GCGATATGCATTGTGATATTGCCCAAGGTTATTATATTTCAAAACCCCTTTTAGAGGATGATTTGTACCAAAAGCTCCCT
TCAAAAATAAAGGAAGGTGTCTGGAAGAACTTCGATTTGTCATTTTAA

Upstream 100 bases:

>100_bases
GTCGTGCACGCTTAGCACCTGTGTTTATTCCCGATACGGTGACAAATGATTCTGAATATTGGGACATTTGGGCGCTGCAA
GTGATTTACTGGTTTTAAGC

Downstream 100 bases:

>100_bases
CGCTCATTTGCGTTTATACAGTATTAATGTAAAAAAACGATGACGTTCCCGGCAATCCTAAATCACAGGAATTGCCTTGA
TTATTCGCGTCAAGGCTAGA

Product: diguanylate cyclase/phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>815_residues
MRIFVSLPWKIMGLLIGFLLIASVLLTFIWIDKNNQDYLSQHQALHDEDLSQMHLIRDMLSNRLELWFESFIHLHEDITD
NPQATADFINEEFDYLQLNWQVKDLWLLDSEYKVIFANHQHVPEYVTASAQQTLQNQSSTSNILCAQSCFQLISMPILAA
NGELLVLTATTSLLEMMAALNRSTLAELALVANIHSLELASLRDAQIQPPISNIRRQELSALLKLIPGGITFDMVLDKGY
RLVVNEQAYLINLLPVDEKVTDPAYLLAVHDISDEWARHDSYQFGVIIISAITVALCILTFFLMAERLRRRLLIVAKRLP
LLAQKEYDEFNAMQFPHSRLFLDEIDEVQRSSNLLGEQLESMDVKIEQNTRELENIAMYDRLTGLPNRNMLNFVLRKKIA
SLARNPEPLVVILLDFDNFRKINDSYGHGIGDEFLIIVAQRLRSNLRESDVISRFGGDEFVIVLQEVDEVSNAMTLAEKL
VTKFREPIEIGAQRFYTSVSLGITSCDEQHLTVDDLVRQADIAMYASKDAGGDRFTLFNEGMSTRVMRHIEIEHDIRDAL
QQEQFKFALQAQIDIGTGKLVGFEALIRWLHPKNGYIMPDEFIPIMENSESMITLGYWGIKRAFAILAHLESMGLSGLRV
AVNLSASQFLDPNLINFMREQLAKSEQGAEQIELELTERTVVADISHTLRIMYQLKELGFSFSIDDFGTGYSSLAYLSQL
PVDIIKIDRSFISGMSVNSADKQIVKSTIAMVRKLGMKVVAEGVETAEQLNTLGDMHCDIAQGYYISKPLLEDDLYQKLP
SKIKEGVWKNFDLSF

Sequences:
NA

Specific function: NA

COG id: COG5001

COG function: function code T; Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA