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The map label for this gene is mmgC [H]

Identifier: 110681102

GI number: 110681102

Start: 3825580

End: 3827361

Strand: Direct

Name: mmgC [H]

Synonym: RD1_3969

Alternate gene names: 110681102

Gene position: 3825580-3827361 (Clockwise)

Preceding gene: 110681101

Following gene: 110681103

Centisome position: 92.56

GC content: 58.87

Gene sequence:

>1782_bases
ATGCCAAGCTATACCGCACCGACCAAAGACATGCAGTTCGTGCTGCACGATGTGTTGAAAGTCACTGAAAAATCCATCCC
CGGGTACGAAGACCTCGAGGCGGATTTCACTTCTGCCATTCTGGAAGAGGCCGGGAAACTCGCGACGAGCGTTCTCGCGC
CGCTGAACACGGTGGGTGACACAGAAGGCTGCACGCTGGAAAACGGCGTCGTGCGCACGCCCACCGGCTTCAAGGCTGCG
TTTGATCAGATCCGCGAAGGTGGGTGGCCGGGCCTTGATATGCCCGAGGAATACGGCGGGCAGAACATGCCCTGTGTCAT
CGGCACCGCCGTGGGAGAGATGTTTTCATCGTCGAACATGGCCTTCACAATGTATCACGGCCTGACCCATGGTGCTGCCT
CGGCCATTCTGGCGCATGGGTCGCAGGCGCAGAAGGAAACCTACCTGCCGAACATGGTATCGTGCGAATGGACCGGCACG
ATGAACCTGACCGAGCCGCATTGCGGCACGGATCTGGGCCTGATGCGCACCAAGGCGGAACCGCAGGCCGATGGCAGCTA
CCGCATCACGGGCCAGAAGATCTTCATCTCGGCAGGTGAACATGACATGTCCAGCAACATCATTCACCTTGTGCTGGCCA
AGATACCCGGCGGCCCCGAGGGCATCAAAGGCGTGTCGCTGTTCATCGTGCCCAAATTCCTCGTCAAGGAAGACGGCACC
CTCGGTGAACGCAATGGCGTGTCGGTGGGCAAGATCGAAGAAAAGATGGGCATCCACGGCAACTCCACCTGCGTGATGAA
CTATGATGGTGCGACGGGCTACCTGCTGGGCGAAGAGCACAAGGGTATGCGCGCCATGTTCACCATGATGAACGAGGCGC
GTCTGGGCGTGGGCATGCAGGGCATGAGCCAAGCCGAAGCCGCCTATCAAAACGCGCTGGAATACGCCAAGGATCGGCTG
CAGGGGCGCGATGTGACCGGTGTAAAGAACCCGGACGGCCCTGCCGATCCGCTGATCGTGCATCCAGATATTCGTCGCTC
GCTCATGGATCAAAAGAGCTTTGTCGAAGGCGCGCGCGCTTTCATGCTCTGGGGGGCCACAATGATCGACGCGGCACATC
GATCACATGACAAGGATGCAGACGGTCTCGTTTCGCTGCTGACGCCCGTGATCAAGGGGTTCCTGACCGATCAGGGCTAT
GACATGACCATCAAGGCGCAGCAGGTCTATGGCGGGCACGGCTACATCGAGGAGTGGGGCATGTCCCAGTTCACCCGTGA
TGCGCGGATCGCCATGATCTATGAGGGAGCCAACGGCGTGCAGGCACTTGATCTCGTCGGGCGCAAGCTGGCCCAGGACG
GTGGCAAGCATGTGATGGCGTTTTTTGATCTGGTAAAAACCTTCATCAAGGACAACGCGGGACAGGATGCGGAATATGAT
CGCGCGTTTCTGGAACCGCTGAAAGCGGCGTCAAAGGATTTGCAGGCAGCGGGCATGTATTTCATGCAGAACGGGATGAA
AAACCCTAACAACGCGCTCTCGGGATCGTATGATTTCATGCATATGTTCGGCCATGTCTGCCTCGGTCTGATGTGGGCAA
AAATGGGCAAGGCGGCACGGGATGCACTGGCCGCCGGCGCATCGGACACCGCGTTTTATGAAACGAAACTGGCGACCGGC
CGCTACTATATGGTGCGCCAACTGCCAGCCACGGCGCTGCACCTCAGTCGCATCCAATCCGGGGCGGATACAGTCATGGC
GCTGGATGCGGCGAATTTCTGA

Upstream 100 bases:

>100_bases
TTGAAATGGGGCGAGGACATGGTTGCCTCCATGCTCAAACACCAAGACGCCGCTCAGTAAACAACAGAACTAATGCCCGC
AGGTTTCAGGGAGAGAGAAA

Downstream 100 bases:

>100_bases
GACCGGCGGCGGGCGGGCCATGCTGGCTTCCCCGCCGGGCCTGCCCGCAAGGTCAAAACCGCGCCCATACGCATCTTTGC
AACACGTCGTTTTGGCGTCG

Product: acyl-CoA dehydrogenase family protein

Products: 2,3-dehydroacyl-CoA; reduced acceptor

Alternate protein names: NA

Number of amino acids: Translated: 593; Mature: 592

Protein sequence:

>593_residues
MPSYTAPTKDMQFVLHDVLKVTEKSIPGYEDLEADFTSAILEEAGKLATSVLAPLNTVGDTEGCTLENGVVRTPTGFKAA
FDQIREGGWPGLDMPEEYGGQNMPCVIGTAVGEMFSSSNMAFTMYHGLTHGAASAILAHGSQAQKETYLPNMVSCEWTGT
MNLTEPHCGTDLGLMRTKAEPQADGSYRITGQKIFISAGEHDMSSNIIHLVLAKIPGGPEGIKGVSLFIVPKFLVKEDGT
LGERNGVSVGKIEEKMGIHGNSTCVMNYDGATGYLLGEEHKGMRAMFTMMNEARLGVGMQGMSQAEAAYQNALEYAKDRL
QGRDVTGVKNPDGPADPLIVHPDIRRSLMDQKSFVEGARAFMLWGATMIDAAHRSHDKDADGLVSLLTPVIKGFLTDQGY
DMTIKAQQVYGGHGYIEEWGMSQFTRDARIAMIYEGANGVQALDLVGRKLAQDGGKHVMAFFDLVKTFIKDNAGQDAEYD
RAFLEPLKAASKDLQAAGMYFMQNGMKNPNNALSGSYDFMHMFGHVCLGLMWAKMGKAARDALAAGASDTAFYETKLATG
RYYMVRQLPATALHLSRIQSGADTVMALDAANF

Sequences:

>Translated_593_residues
MPSYTAPTKDMQFVLHDVLKVTEKSIPGYEDLEADFTSAILEEAGKLATSVLAPLNTVGDTEGCTLENGVVRTPTGFKAA
FDQIREGGWPGLDMPEEYGGQNMPCVIGTAVGEMFSSSNMAFTMYHGLTHGAASAILAHGSQAQKETYLPNMVSCEWTGT
MNLTEPHCGTDLGLMRTKAEPQADGSYRITGQKIFISAGEHDMSSNIIHLVLAKIPGGPEGIKGVSLFIVPKFLVKEDGT
LGERNGVSVGKIEEKMGIHGNSTCVMNYDGATGYLLGEEHKGMRAMFTMMNEARLGVGMQGMSQAEAAYQNALEYAKDRL
QGRDVTGVKNPDGPADPLIVHPDIRRSLMDQKSFVEGARAFMLWGATMIDAAHRSHDKDADGLVSLLTPVIKGFLTDQGY
DMTIKAQQVYGGHGYIEEWGMSQFTRDARIAMIYEGANGVQALDLVGRKLAQDGGKHVMAFFDLVKTFIKDNAGQDAEYD
RAFLEPLKAASKDLQAAGMYFMQNGMKNPNNALSGSYDFMHMFGHVCLGLMWAKMGKAARDALAAGASDTAFYETKLATG
RYYMVRQLPATALHLSRIQSGADTVMALDAANF
>Mature_592_residues
PSYTAPTKDMQFVLHDVLKVTEKSIPGYEDLEADFTSAILEEAGKLATSVLAPLNTVGDTEGCTLENGVVRTPTGFKAAF
DQIREGGWPGLDMPEEYGGQNMPCVIGTAVGEMFSSSNMAFTMYHGLTHGAASAILAHGSQAQKETYLPNMVSCEWTGTM
NLTEPHCGTDLGLMRTKAEPQADGSYRITGQKIFISAGEHDMSSNIIHLVLAKIPGGPEGIKGVSLFIVPKFLVKEDGTL
GERNGVSVGKIEEKMGIHGNSTCVMNYDGATGYLLGEEHKGMRAMFTMMNEARLGVGMQGMSQAEAAYQNALEYAKDRLQ
GRDVTGVKNPDGPADPLIVHPDIRRSLMDQKSFVEGARAFMLWGATMIDAAHRSHDKDADGLVSLLTPVIKGFLTDQGYD
MTIKAQQVYGGHGYIEEWGMSQFTRDARIAMIYEGANGVQALDLVGRKLAQDGGKHVMAFFDLVKTFIKDNAGQDAEYDR
AFLEPLKAASKDLQAAGMYFMQNGMKNPNNALSGSYDFMHMFGHVCLGLMWAKMGKAARDALAAGASDTAFYETKLATGR
YYMVRQLPATALHLSRIQSGADTVMALDAANF

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501859, Length=401, Percent_Identity=24.6882793017456, Blast_Score=111, Evalue=2e-24,
Organism=Homo sapiens, GI7656849, Length=370, Percent_Identity=27.5675675675676, Blast_Score=110, Evalue=4e-24,
Organism=Homo sapiens, GI226958412, Length=390, Percent_Identity=26.4102564102564, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI21361497, Length=366, Percent_Identity=25.4098360655738, Blast_Score=103, Evalue=4e-22,
Organism=Homo sapiens, GI226958414, Length=386, Percent_Identity=26.6839378238342, Blast_Score=103, Evalue=4e-22,
Organism=Homo sapiens, GI4557233, Length=384, Percent_Identity=27.0833333333333, Blast_Score=102, Evalue=9e-22,
Organism=Homo sapiens, GI4557235, Length=385, Percent_Identity=27.7922077922078, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI76496475, Length=385, Percent_Identity=27.7922077922078, Blast_Score=98, Evalue=2e-20,
Organism=Homo sapiens, GI4501857, Length=384, Percent_Identity=25, Blast_Score=93, Evalue=7e-19,
Organism=Homo sapiens, GI4503943, Length=322, Percent_Identity=26.0869565217391, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI4557231, Length=364, Percent_Identity=24.7252747252747, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI187960098, Length=364, Percent_Identity=24.7252747252747, Blast_Score=71, Evalue=3e-12,
Organism=Escherichia coli, GI87082384, Length=322, Percent_Identity=29.8136645962733, Blast_Score=131, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI17508101, Length=361, Percent_Identity=26.8698060941828, Blast_Score=116, Evalue=4e-26,
Organism=Caenorhabditis elegans, GI71985184, Length=387, Percent_Identity=26.6149870801034, Blast_Score=111, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17506239, Length=363, Percent_Identity=24.5179063360882, Blast_Score=98, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17533517, Length=426, Percent_Identity=25.1173708920188, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17538396, Length=385, Percent_Identity=23.1168831168831, Blast_Score=93, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI71990804, Length=264, Percent_Identity=28.4090909090909, Blast_Score=91, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI86563383, Length=382, Percent_Identity=24.6073298429319, Blast_Score=91, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI86563381, Length=382, Percent_Identity=24.6073298429319, Blast_Score=90, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17534899, Length=370, Percent_Identity=24.8648648648649, Blast_Score=89, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI71985192, Length=249, Percent_Identity=28.5140562248996, Blast_Score=86, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI32563615, Length=236, Percent_Identity=26.271186440678, Blast_Score=79, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI17505929, Length=367, Percent_Identity=24.5231607629428, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI21356377, Length=380, Percent_Identity=26.0526315789474, Blast_Score=104, Evalue=2e-22,
Organism=Drosophila melanogaster, GI24666513, Length=418, Percent_Identity=24.6411483253589, Blast_Score=97, Evalue=3e-20,
Organism=Drosophila melanogaster, GI21355753, Length=371, Percent_Identity=24.7978436657682, Blast_Score=96, Evalue=6e-20,
Organism=Drosophila melanogaster, GI281363737, Length=368, Percent_Identity=25.5434782608696, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24646207, Length=381, Percent_Identity=25.1968503937008, Blast_Score=91, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24660351, Length=388, Percent_Identity=24.7422680412371, Blast_Score=83, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: 1.3.99.3

Molecular weight: Translated: 64191; Mature: 64060

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSYTAPTKDMQFVLHDVLKVTEKSIPGYEDLEADFTSAILEEAGKLATSVLAPLNTVGD
CCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TEGCTLENGVVRTPTGFKAAFDQIREGGWPGLDMPEEYGGQNMPCVIGTAVGEMFSSSNM
CCCCEECCCEEECCCCHHHHHHHHHHCCCCCCCCCHHHCCCCCCEEEHHHHHHHHCCCCC
AFTMYHGLTHGAASAILAHGSQAQKETYLPNMVSCEWTGTMNLTEPHCGTDLGLMRTKAE
EEEEECCCHHHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCHHHCCCCC
PQADGSYRITGQKIFISAGEHDMSSNIIHLVLAKIPGGPEGIKGVSLFIVPKFLVKEDGT
CCCCCCEEEECCEEEEECCCCCCCCCEEEEHEECCCCCCCCCCCEEEEEECHHHHCCCCC
LGERNGVSVGKIEEKMGIHGNSTCVMNYDGATGYLLGEEHKGMRAMFTMMNEARLGVGMQ
CCCCCCCCCCHHHHHHCCCCCCEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCC
GMSQAEAAYQNALEYAKDRLQGRDVTGVKNPDGPADPLIVHPDIRRSLMDQKSFVEGARA
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHH
FMLWGATMIDAAHRSHDKDADGLVSLLTPVIKGFLTDQGYDMTIKAQQVYGGHGYIEEWG
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHHC
MSQFTRDARIAMIYEGANGVQALDLVGRKLAQDGGKHVMAFFDLVKTFIKDNAGQDAEYD
HHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHH
RAFLEPLKAASKDLQAAGMYFMQNGMKNPNNALSGSYDFMHMFGHVCLGLMWAKMGKAAR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
DALAAGASDTAFYETKLATGRYYMVRQLPATALHLSRIQSGADTVMALDAANF
HHHHCCCCCCCEEEEECCCCCEEEEHHCCHHHHHHHHHHCCCCEEEEEECCCC
>Mature Secondary Structure 
PSYTAPTKDMQFVLHDVLKVTEKSIPGYEDLEADFTSAILEEAGKLATSVLAPLNTVGD
CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TEGCTLENGVVRTPTGFKAAFDQIREGGWPGLDMPEEYGGQNMPCVIGTAVGEMFSSSNM
CCCCEECCCEEECCCCHHHHHHHHHHCCCCCCCCCHHHCCCCCCEEEHHHHHHHHCCCCC
AFTMYHGLTHGAASAILAHGSQAQKETYLPNMVSCEWTGTMNLTEPHCGTDLGLMRTKAE
EEEEECCCHHHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCHHHCCCCC
PQADGSYRITGQKIFISAGEHDMSSNIIHLVLAKIPGGPEGIKGVSLFIVPKFLVKEDGT
CCCCCCEEEECCEEEEECCCCCCCCCEEEEHEECCCCCCCCCCCEEEEEECHHHHCCCCC
LGERNGVSVGKIEEKMGIHGNSTCVMNYDGATGYLLGEEHKGMRAMFTMMNEARLGVGMQ
CCCCCCCCCCHHHHHHCCCCCCEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCC
GMSQAEAAYQNALEYAKDRLQGRDVTGVKNPDGPADPLIVHPDIRRSLMDQKSFVEGARA
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHH
FMLWGATMIDAAHRSHDKDADGLVSLLTPVIKGFLTDQGYDMTIKAQQVYGGHGYIEEWG
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHHC
MSQFTRDARIAMIYEGANGVQALDLVGRKLAQDGGKHVMAFFDLVKTFIKDNAGQDAEYD
HHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHH
RAFLEPLKAASKDLQAAGMYFMQNGMKNPNNALSGSYDFMHMFGHVCLGLMWAKMGKAAR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
DALAAGASDTAFYETKLATGRYYMVRQLPATALHLSRIQSGADTVMALDAANF
HHHHCCCCCCCEEEEECCCCCEEEEHHCCHHHHHHHHHHCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: acyl-CoA; acceptor

Specific reaction: acyl-CoA + acceptor = 2,3-dehydroacyl-CoA + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]