| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is ackA [H]
Identifier: 110680973
GI number: 110680973
Start: 3701817
End: 3702968
Strand: Direct
Name: ackA [H]
Synonym: RD1_3831
Alternate gene names: 110680973
Gene position: 3701817-3702968 (Clockwise)
Preceding gene: 110680965
Following gene: 110680976
Centisome position: 89.57
GC content: 60.33
Gene sequence:
>1152_bases ATGAGCGGTATCCTTACATTAAACACTGGCTCGTCGTCGCTGAAATTCGGGCTTTACCGGGATGCGCCAGAACCTGACCT GCTGCTGCACGGTCAGGTCGATGAGATTGGCGACAACGCGCTATTGATCCTGAACACCGGCGAGGAAAGAACCAAACAGA AGGTAGCGGCACCCAAGCCCGCTGCAGCGCTGGAACATGTGATGCAGGCGCTGGCGCCGCATTTGAGCGGGTTGCCCATC CACGGGGTGGGCCACAGGATTGTGCATGGCGGCATGGATTTTACGAAACCCACGCTGCTGACCGGCGATGTGATGGCGGC GCTTGCCCGGTTCAACCCGCTCGCCCCGCTCCATCAGCCCCATAACCTCGCCGGGGTTGAAGCCGCGCGCACGGCCTTTC CGGATGCCGTTCAGGTCGGGTGTTTCGACACGGCGTTTCACCGGGGCCATCCGTGGGTCAATGACACCTTTGCCCTGCCG CGCGCCTTTTATGACGAAGGGGTGCGGCGCTACGGGTTTCACGGGGTCAGTTACGAATACATCACAGGCGTTATCAAAAC CACCTATCCCGACCTGCACAAAGGGCGGCTCGTGATTGCGCATCTGGGCAACGGGGCGTCCATGTGCGCGATTACAAACG GTAAAAGCGTCGGCTCCACAATGGGATTTTCGGCATTGGATGGTTTGCCCATGGGCACCCGCTGCGGCCAGATCGACCCC GGTGTGGTGCTGTATCTGCTCACGCAAAAGGGCATGGCACCCCTTGAAGTGATGGAAATGCTCTATTCCCAAAGCGGGCT TCTGGGCCTTTCGGGGATCACCAGCGATATGCGCGCACTTCTGGCCTCGGACGATCCGCAGGCGCGCGAAGCAATCGATT ACTACGTATTCCGCGCCCGGCGTGAAATTGGGGCGCTGACGGCGGTGCTGGGGGGCATTGATGCGCTGATCTTTTGCGGG GGCATCGGGGAAAACGCAGCCCCCATCCGCAGCCGCATCGTTGAAGGGCTGGAGTACCTGAACATCAAGATTGACCCGGC GCAAAACCTGCGCAATGCGCGCGATATCGGGACGGGATCAACACGCGTGATGGTCATCCCGACGGATGAGGAACGCATCA TCGCGCGCGCGGTTCATGCGGCAATATCATAG
Upstream 100 bases:
>100_bases GAGGCCATGTGCAAAACACACTGACAAGCCGCGCGGATCGGATGCACATGCGCCCCGCGTATCGTGCAAGCGTTGCTTTG TTCCGCCGGGTCGCCGCCAC
Downstream 100 bases:
>100_bases GGCACGACGCCTTGAGCCGGATCAATCACAACACCGGGCCAATGGTGGCGATGACATTGTGCCAGATGCGTTCGTGTCGG GGCCAGGCAAGCACCGTGTC
Product: acetate kinase
Products: NA
Alternate protein names: Acetokinase [H]
Number of amino acids: Translated: 383; Mature: 382
Protein sequence:
>383_residues MSGILTLNTGSSSLKFGLYRDAPEPDLLLHGQVDEIGDNALLILNTGEERTKQKVAAPKPAAALEHVMQALAPHLSGLPI HGVGHRIVHGGMDFTKPTLLTGDVMAALARFNPLAPLHQPHNLAGVEAARTAFPDAVQVGCFDTAFHRGHPWVNDTFALP RAFYDEGVRRYGFHGVSYEYITGVIKTTYPDLHKGRLVIAHLGNGASMCAITNGKSVGSTMGFSALDGLPMGTRCGQIDP GVVLYLLTQKGMAPLEVMEMLYSQSGLLGLSGITSDMRALLASDDPQAREAIDYYVFRARREIGALTAVLGGIDALIFCG GIGENAAPIRSRIVEGLEYLNIKIDPAQNLRNARDIGTGSTRVMVIPTDEERIIARAVHAAIS
Sequences:
>Translated_383_residues MSGILTLNTGSSSLKFGLYRDAPEPDLLLHGQVDEIGDNALLILNTGEERTKQKVAAPKPAAALEHVMQALAPHLSGLPI HGVGHRIVHGGMDFTKPTLLTGDVMAALARFNPLAPLHQPHNLAGVEAARTAFPDAVQVGCFDTAFHRGHPWVNDTFALP RAFYDEGVRRYGFHGVSYEYITGVIKTTYPDLHKGRLVIAHLGNGASMCAITNGKSVGSTMGFSALDGLPMGTRCGQIDP GVVLYLLTQKGMAPLEVMEMLYSQSGLLGLSGITSDMRALLASDDPQAREAIDYYVFRARREIGALTAVLGGIDALIFCG GIGENAAPIRSRIVEGLEYLNIKIDPAQNLRNARDIGTGSTRVMVIPTDEERIIARAVHAAIS >Mature_382_residues SGILTLNTGSSSLKFGLYRDAPEPDLLLHGQVDEIGDNALLILNTGEERTKQKVAAPKPAAALEHVMQALAPHLSGLPIH GVGHRIVHGGMDFTKPTLLTGDVMAALARFNPLAPLHQPHNLAGVEAARTAFPDAVQVGCFDTAFHRGHPWVNDTFALPR AFYDEGVRRYGFHGVSYEYITGVIKTTYPDLHKGRLVIAHLGNGASMCAITNGKSVGSTMGFSALDGLPMGTRCGQIDPG VVLYLLTQKGMAPLEVMEMLYSQSGLLGLSGITSDMRALLASDDPQAREAIDYYVFRARREIGALTAVLGGIDALIFCGG IGENAAPIRSRIVEGLEYLNIKIDPAQNLRNARDIGTGSTRVMVIPTDEERIIARAVHAAIS
Specific function: Anaerobic degradation of L-threonine to propionate. [C]
COG id: COG0282
COG function: function code C; Acetate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acetokinase family [H]
Homologues:
Organism=Escherichia coli, GI145693184, Length=396, Percent_Identity=38.8888888888889, Blast_Score=250, Evalue=1e-67, Organism=Escherichia coli, GI1788633, Length=398, Percent_Identity=37.6884422110553, Blast_Score=220, Evalue=1e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000890 - InterPro: IPR004372 [H]
Pfam domain/function: PF00871 Acetate_kinase [H]
EC number: =2.7.2.1 [H]
Molecular weight: Translated: 40983; Mature: 40851
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: PS01075 ACETATE_KINASE_1 ; PS01076 ACETATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGILTLNTGSSSLKFGLYRDAPEPDLLLHGQVDEIGDNALLILNTGEERTKQKVAAPKP CCCEEEEECCCCCEEEEEECCCCCCCEEEECCHHHCCCCEEEEEECCCHHHHHHHCCCCH AAALEHVMQALAPHLSGLPIHGVGHRIVHGGMDFTKPTLLTGDVMAALARFNPLAPLHQP HHHHHHHHHHHHHHHCCCCCCCCCHHEEECCCCCCCCEEEHHHHHHHHHHCCCCCCCCCC HNLAGVEAARTAFPDAVQVGCFDTAFHRGHPWVNDTFALPRAFYDEGVRRYGFHGVSYEY CCCCCHHHHHHCCCCHHEECCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHH ITGVIKTTYPDLHKGRLVIAHLGNGASMCAITNGKSVGSTMGFSALDGLPMGTRCGQIDP HHHHHHHCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCC GVVLYLLTQKGMAPLEVMEMLYSQSGLLGLSGITSDMRALLASDDPQAREAIDYYVFRAR CEEEEEEECCCCCHHHHHHHHHHCCCCEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHH REIGALTAVLGGIDALIFCGGIGENAAPIRSRIVEGLEYLNIKIDPAQNLRNARDIGTGS HHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHEEEEEECCHHHHHHHHCCCCCC TRVMVIPTDEERIIARAVHAAIS EEEEEEECCHHHHHHHHHHHHCC >Mature Secondary Structure SGILTLNTGSSSLKFGLYRDAPEPDLLLHGQVDEIGDNALLILNTGEERTKQKVAAPKP CCEEEEECCCCCEEEEEECCCCCCCEEEECCHHHCCCCEEEEEECCCHHHHHHHCCCCH AAALEHVMQALAPHLSGLPIHGVGHRIVHGGMDFTKPTLLTGDVMAALARFNPLAPLHQP HHHHHHHHHHHHHHHCCCCCCCCCHHEEECCCCCCCCEEEHHHHHHHHHHCCCCCCCCCC HNLAGVEAARTAFPDAVQVGCFDTAFHRGHPWVNDTFALPRAFYDEGVRRYGFHGVSYEY CCCCCHHHHHHCCCCHHEECCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHH ITGVIKTTYPDLHKGRLVIAHLGNGASMCAITNGKSVGSTMGFSALDGLPMGTRCGQIDP HHHHHHHCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCC GVVLYLLTQKGMAPLEVMEMLYSQSGLLGLSGITSDMRALLASDDPQAREAIDYYVFRAR CEEEEEEECCCCCHHHHHHHHHHCCCCEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHH REIGALTAVLGGIDALIFCGGIGENAAPIRSRIVEGLEYLNIKIDPAQNLRNARDIGTGS HHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHEEEEEECCHHHHHHHHCCCCCC TRVMVIPTDEERIIARAVHAAIS EEEEEEECCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA