Click here to switch to the map view.

The map label for this gene is ureB

Identifier: 110680941

GI number: 110680941

Start: 3672305

End: 3672610

Strand: Direct

Name: ureB

Synonym: RD1_3795

Alternate gene names: 110680941

Gene position: 3672305-3672610 (Clockwise)

Preceding gene: 110680940

Following gene: 110680942

Centisome position: 88.85

GC content: 59.8

Gene sequence:

>306_bases
ATGATCCCCGGAGAAATCATGCCCAAAGAGGGTGATATCACCCTGAATGAAGGAGCCGAGGCCATCACGCTGATGGTGGC
AAACACCGGGGATCGCCCGGTGCAGGTCGGCAGCCACTATCATTTCGCTGAGGCAAACGCGGCGCTGGAGTTTGACCGGG
ACGCCGCGCGCGGCATGCGTCTCGACATTACCGCAGGAACCGCCGTACGCTTTGAACCAGGCCAGAGACGCGACGTGCAG
CTGATCCCTATCTCGGGTGCACGGCGTATTTTCGGGTTCAATCAGCAGGTCATGGGTGATCTCTAG

Upstream 100 bases:

>100_bases
AGGGGTGCCGGAGATGATCCACGATGTGCAGGTCGAGGCGACCTTTCCCGATGGCACCAAACTTGTCACCGTCCACAACC
CGATCCGCTAGGAGGCATCC

Downstream 100 bases:

>100_bases
CGCCCCCTGCGCAACAGTGAGGAGACAAAGATATGTGTGATGCTTGCGTGATAAATGCCGTAAAGGACCGGATGCTGTCG
CGGCGGAATTTTTTCAAAGC

Product: urease beta subunit

Products: NA

Alternate protein names: Urea amidohydrolase subunit beta

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MIPGEIMPKEGDITLNEGAEAITLMVANTGDRPVQVGSHYHFAEANAALEFDRDAARGMRLDITAGTAVRFEPGQRRDVQ
LIPISGARRIFGFNQQVMGDL

Sequences:

>Translated_101_residues
MIPGEIMPKEGDITLNEGAEAITLMVANTGDRPVQVGSHYHFAEANAALEFDRDAARGMRLDITAGTAVRFEPGQRRDVQ
LIPISGARRIFGFNQQVMGDL
>Mature_101_residues
MIPGEIMPKEGDITLNEGAEAITLMVANTGDRPVQVGSHYHFAEANAALEFDRDAARGMRLDITAGTAVRFEPGQRRDVQ
LIPISGARRIFGFNQQVMGDL

Specific function: Unknown

COG id: COG0832

COG function: function code E; Urea amidohydrolase (urease) beta subunit

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the urease beta subunit family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): URE2_ROSDO (Q161T1)

Other databases:

- EMBL:   CP000362
- RefSeq:   YP_683948.1
- ProteinModelPortal:   Q161T1
- SMR:   Q161T1
- STRING:   Q161T1
- GeneID:   4198843
- GenomeReviews:   CP000362_GR
- KEGG:   rde:RD1_3795
- NMPDR:   fig|375451.6.peg.3528
- eggNOG:   COG0832
- HOGENOM:   HBG365918
- OMA:   TLEVSNT
- ProtClustDB:   CLSK762115
- BioCyc:   RDEN375451:RD1_3795-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01954
- InterPro:   IPR002019
- Gene3D:   G3DSA:2.10.150.10
- TIGRFAMs:   TIGR00192

Pfam domain/function: PF00699 Urease_beta; SSF51278 Urease_beta

EC number: =3.5.1.5

Molecular weight: Translated: 11013; Mature: 11013

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPGEIMPKEGDITLNEGAEAITLMVANTGDRPVQVGSHYHFAEANAALEFDRDAARGMR
CCCCCCCCCCCCEEECCCCCEEEEEEECCCCCCEEECCEEEEECCCCEEEECCCCCCCEE
LDITAGTAVRFEPGQRRDVQLIPISGARRIFGFNQQVMGDL
EEEECCCEEEECCCCCCCEEEEECCCCCEEECCCHHCCCCC
>Mature Secondary Structure
MIPGEIMPKEGDITLNEGAEAITLMVANTGDRPVQVGSHYHFAEANAALEFDRDAARGMR
CCCCCCCCCCCCEEECCCCCEEEEEEECCCCCCEEECCEEEEECCCCEEEECCCCCCCEE
LDITAGTAVRFEPGQRRDVQLIPISGARRIFGFNQQVMGDL
EEEECCCEEEECCCCCCCEEEEECCCCCEEECCCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA