Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is nadX [H]

Identifier: 110680797

GI number: 110680797

Start: 3505560

End: 3506342

Strand: Direct

Name: nadX [H]

Synonym: RD1_3642

Alternate gene names: 110680797

Gene position: 3505560-3506342 (Clockwise)

Preceding gene: 110680780

Following gene: 110680802

Centisome position: 84.82

GC content: 64.62

Gene sequence:

>783_bases
ATGAAGATCGGTATTATCGGCGAAGGTGCCATTGGCCGCTACGTGATGGACCAACTCGACCGGGACGGGCGCGCGCCGGT
TGTTTCTCTGGTGCGGCCTCAGCGCCTGATCGGGGCGCAGGACACGGGCATGACCCGCGTGTTCCACGTGTGCGACCTGC
CTCCCGGCTTGGATTTGATGGTGGATTGCGCGGGGCATGCAGCCCTGATCGAACACGGCGCCGCCATCCTGAAACGAGGC
ATTGATCTGGTCACGGTCTCACTCGGCGCGCTGGCGGATCAACACGTTGAACAGAGCCTGCGGCAAGCAGCACTAACCGG
CGGCGCGCAATTGCATCTGGCAAGCGGGGCCATCGGTGCGCTCGATTGTCTGCAGGCTGCCCGGGTCGGCGGGTTGAGCG
CGGTGCGCTACACAGGGCGCAAACCACCTGCGGGCTGGCGTGGTTCTGCGGCGCAGGAACGGGTCGATCTGGATATGCTG
ACAACAGCCGCGGCCCATTTCGAGGGCACAGCACGGCAGGCGGCACGGCAATATCCCAAGAATGCGAATGTTGCGGCCGC
CGTGGCCATTGCAGGGCTGGGGTTCGAGCGAACACGTGTGACGCTGATCGCCGACCCTGATGTCACTGCCAACATTCACG
AAATAGAGGCATCCGGCGCATTCGGCCGCTTCAGCTTCCGGATCGAAGGCACGGCCCTGCCCGACAACCCGCGCAGTTCC
GCCCTTGCCGCGATGAGCGTCATATCCGCGATCGCGCGCCGCCGTGCCCCGGTAACAACATAG

Upstream 100 bases:

>100_bases
CAAGCATATGCCATGCTCGGCGGTCAAAAATAATGTGTGAGAAAACAGTACCAAAGCGCCGGTGTTTTCCGCTACTGAGA
ATGAAACAGGGGAGGCCAGC

Downstream 100 bases:

>100_bases
CAACCCATGGGTTCCAATCGTGCGCGCACACGCCTCAGACCGCGCCGGATGGTTGCTGTGGGCCCCACCGCGCTGGTGCA
GGGACGCTGCCCGCTGGGCA

Product: L-aspartate dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MKIGIIGEGAIGRYVMDQLDRDGRAPVVSLVRPQRLIGAQDTGMTRVFHVCDLPPGLDLMVDCAGHAALIEHGAAILKRG
IDLVTVSLGALADQHVEQSLRQAALTGGAQLHLASGAIGALDCLQAARVGGLSAVRYTGRKPPAGWRGSAAQERVDLDML
TTAAAHFEGTARQAARQYPKNANVAAAVAIAGLGFERTRVTLIADPDVTANIHEIEASGAFGRFSFRIEGTALPDNPRSS
ALAAMSVISAIARRRAPVTT

Sequences:

>Translated_260_residues
MKIGIIGEGAIGRYVMDQLDRDGRAPVVSLVRPQRLIGAQDTGMTRVFHVCDLPPGLDLMVDCAGHAALIEHGAAILKRG
IDLVTVSLGALADQHVEQSLRQAALTGGAQLHLASGAIGALDCLQAARVGGLSAVRYTGRKPPAGWRGSAAQERVDLDML
TTAAAHFEGTARQAARQYPKNANVAAAVAIAGLGFERTRVTLIADPDVTANIHEIEASGAFGRFSFRIEGTALPDNPRSS
ALAAMSVISAIARRRAPVTT
>Mature_260_residues
MKIGIIGEGAIGRYVMDQLDRDGRAPVVSLVRPQRLIGAQDTGMTRVFHVCDLPPGLDLMVDCAGHAALIEHGAAILKRG
IDLVTVSLGALADQHVEQSLRQAALTGGAQLHLASGAIGALDCLQAARVGGLSAVRYTGRKPPAGWRGSAAQERVDLDML
TTAAAHFEGTARQAARQYPKNANVAAAVAIAGLGFERTRVTLIADPDVTANIHEIEASGAFGRFSFRIEGTALPDNPRSS
ALAAMSVISAIARRRAPVTT

Specific function: Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate [H]

COG id: COG1712

COG function: function code R; Predicted dinucleotide-utilizing enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the L-aspartate dehydrogenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005106
- InterPro:   IPR002811
- InterPro:   IPR011182
- InterPro:   IPR020626
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01958 DUF108; PF03447 NAD_binding_3 [H]

EC number: =1.4.1.21 [H]

Molecular weight: Translated: 27171; Mature: 27171

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIGIIGEGAIGRYVMDQLDRDGRAPVVSLVRPQRLIGAQDTGMTRVFHVCDLPPGLDLM
CEEEEECCCHHHHHHHHHHCCCCCCCHHHHCCCHHHHCCCCCCCEEEEEEECCCCCCCEE
VDCAGHAALIEHGAAILKRGIDLVTVSLGALADQHVEQSLRQAALTGGAQLHLASGAIGA
EECCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHH
LDCLQAARVGGLSAVRYTGRKPPAGWRGSAAQERVDLDMLTTAAAHFEGTARQAARQYPK
HHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHCCC
NANVAAAVAIAGLGFERTRVTLIADPDVTANIHEIEASGAFGRFSFRIEGTALPDNPRSS
CCCHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCHH
ALAAMSVISAIARRRAPVTT
HHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKIGIIGEGAIGRYVMDQLDRDGRAPVVSLVRPQRLIGAQDTGMTRVFHVCDLPPGLDLM
CEEEEECCCHHHHHHHHHHCCCCCCCHHHHCCCHHHHCCCCCCCEEEEEEECCCCCCCEE
VDCAGHAALIEHGAAILKRGIDLVTVSLGALADQHVEQSLRQAALTGGAQLHLASGAIGA
EECCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHH
LDCLQAARVGGLSAVRYTGRKPPAGWRGSAAQERVDLDMLTTAAAHFEGTARQAARQYPK
HHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHCCC
NANVAAAVAIAGLGFERTRVTLIADPDVTANIHEIEASGAFGRFSFRIEGTALPDNPRSS
CCCHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCHH
ALAAMSVISAIARRRAPVTT
HHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA