| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is nadX [H]
Identifier: 110680797
GI number: 110680797
Start: 3505560
End: 3506342
Strand: Direct
Name: nadX [H]
Synonym: RD1_3642
Alternate gene names: 110680797
Gene position: 3505560-3506342 (Clockwise)
Preceding gene: 110680780
Following gene: 110680802
Centisome position: 84.82
GC content: 64.62
Gene sequence:
>783_bases ATGAAGATCGGTATTATCGGCGAAGGTGCCATTGGCCGCTACGTGATGGACCAACTCGACCGGGACGGGCGCGCGCCGGT TGTTTCTCTGGTGCGGCCTCAGCGCCTGATCGGGGCGCAGGACACGGGCATGACCCGCGTGTTCCACGTGTGCGACCTGC CTCCCGGCTTGGATTTGATGGTGGATTGCGCGGGGCATGCAGCCCTGATCGAACACGGCGCCGCCATCCTGAAACGAGGC ATTGATCTGGTCACGGTCTCACTCGGCGCGCTGGCGGATCAACACGTTGAACAGAGCCTGCGGCAAGCAGCACTAACCGG CGGCGCGCAATTGCATCTGGCAAGCGGGGCCATCGGTGCGCTCGATTGTCTGCAGGCTGCCCGGGTCGGCGGGTTGAGCG CGGTGCGCTACACAGGGCGCAAACCACCTGCGGGCTGGCGTGGTTCTGCGGCGCAGGAACGGGTCGATCTGGATATGCTG ACAACAGCCGCGGCCCATTTCGAGGGCACAGCACGGCAGGCGGCACGGCAATATCCCAAGAATGCGAATGTTGCGGCCGC CGTGGCCATTGCAGGGCTGGGGTTCGAGCGAACACGTGTGACGCTGATCGCCGACCCTGATGTCACTGCCAACATTCACG AAATAGAGGCATCCGGCGCATTCGGCCGCTTCAGCTTCCGGATCGAAGGCACGGCCCTGCCCGACAACCCGCGCAGTTCC GCCCTTGCCGCGATGAGCGTCATATCCGCGATCGCGCGCCGCCGTGCCCCGGTAACAACATAG
Upstream 100 bases:
>100_bases CAAGCATATGCCATGCTCGGCGGTCAAAAATAATGTGTGAGAAAACAGTACCAAAGCGCCGGTGTTTTCCGCTACTGAGA ATGAAACAGGGGAGGCCAGC
Downstream 100 bases:
>100_bases CAACCCATGGGTTCCAATCGTGCGCGCACACGCCTCAGACCGCGCCGGATGGTTGCTGTGGGCCCCACCGCGCTGGTGCA GGGACGCTGCCCGCTGGGCA
Product: L-aspartate dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MKIGIIGEGAIGRYVMDQLDRDGRAPVVSLVRPQRLIGAQDTGMTRVFHVCDLPPGLDLMVDCAGHAALIEHGAAILKRG IDLVTVSLGALADQHVEQSLRQAALTGGAQLHLASGAIGALDCLQAARVGGLSAVRYTGRKPPAGWRGSAAQERVDLDML TTAAAHFEGTARQAARQYPKNANVAAAVAIAGLGFERTRVTLIADPDVTANIHEIEASGAFGRFSFRIEGTALPDNPRSS ALAAMSVISAIARRRAPVTT
Sequences:
>Translated_260_residues MKIGIIGEGAIGRYVMDQLDRDGRAPVVSLVRPQRLIGAQDTGMTRVFHVCDLPPGLDLMVDCAGHAALIEHGAAILKRG IDLVTVSLGALADQHVEQSLRQAALTGGAQLHLASGAIGALDCLQAARVGGLSAVRYTGRKPPAGWRGSAAQERVDLDML TTAAAHFEGTARQAARQYPKNANVAAAVAIAGLGFERTRVTLIADPDVTANIHEIEASGAFGRFSFRIEGTALPDNPRSS ALAAMSVISAIARRRAPVTT >Mature_260_residues MKIGIIGEGAIGRYVMDQLDRDGRAPVVSLVRPQRLIGAQDTGMTRVFHVCDLPPGLDLMVDCAGHAALIEHGAAILKRG IDLVTVSLGALADQHVEQSLRQAALTGGAQLHLASGAIGALDCLQAARVGGLSAVRYTGRKPPAGWRGSAAQERVDLDML TTAAAHFEGTARQAARQYPKNANVAAAVAIAGLGFERTRVTLIADPDVTANIHEIEASGAFGRFSFRIEGTALPDNPRSS ALAAMSVISAIARRRAPVTT
Specific function: Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate [H]
COG id: COG1712
COG function: function code R; Predicted dinucleotide-utilizing enzyme
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the L-aspartate dehydrogenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005106 - InterPro: IPR002811 - InterPro: IPR011182 - InterPro: IPR020626 - InterPro: IPR016040 [H]
Pfam domain/function: PF01958 DUF108; PF03447 NAD_binding_3 [H]
EC number: =1.4.1.21 [H]
Molecular weight: Translated: 27171; Mature: 27171
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIGIIGEGAIGRYVMDQLDRDGRAPVVSLVRPQRLIGAQDTGMTRVFHVCDLPPGLDLM CEEEEECCCHHHHHHHHHHCCCCCCCHHHHCCCHHHHCCCCCCCEEEEEEECCCCCCCEE VDCAGHAALIEHGAAILKRGIDLVTVSLGALADQHVEQSLRQAALTGGAQLHLASGAIGA EECCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHH LDCLQAARVGGLSAVRYTGRKPPAGWRGSAAQERVDLDMLTTAAAHFEGTARQAARQYPK HHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHCCC NANVAAAVAIAGLGFERTRVTLIADPDVTANIHEIEASGAFGRFSFRIEGTALPDNPRSS CCCHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCHH ALAAMSVISAIARRRAPVTT HHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKIGIIGEGAIGRYVMDQLDRDGRAPVVSLVRPQRLIGAQDTGMTRVFHVCDLPPGLDLM CEEEEECCCHHHHHHHHHHCCCCCCCHHHHCCCHHHHCCCCCCCEEEEEEECCCCCCCEE VDCAGHAALIEHGAAILKRGIDLVTVSLGALADQHVEQSLRQAALTGGAQLHLASGAIGA EECCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHH LDCLQAARVGGLSAVRYTGRKPPAGWRGSAAQERVDLDMLTTAAAHFEGTARQAARQYPK HHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHCCC NANVAAAVAIAGLGFERTRVTLIADPDVTANIHEIEASGAFGRFSFRIEGTALPDNPRSS CCCHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCHH ALAAMSVISAIARRRAPVTT HHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA