Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is egsA [H]

Identifier: 110680772

GI number: 110680772

Start: 3477980

End: 3479311

Strand: Direct

Name: egsA [H]

Synonym: RD1_3615

Alternate gene names: 110680772

Gene position: 3477980-3479311 (Clockwise)

Preceding gene: 110680770

Following gene: 110680773

Centisome position: 84.15

GC content: 58.63

Gene sequence:

>1332_bases
ATGGGCCTAGCGGAAATAGACAGCCGCAACTGGACATCCCTCATTGACGATATTGTGACAGGCGACTTCTATGATGCCGA
GGCTGGCAAGAAGGTGTCGGTTCCCTACGAATCCATCGTGTTCGAACAAAGCCTTGATGGGCAGGAAGAGGCGCTCATTT
CCCGGCTTAAACTGGGCGAGAAGCTTGCGGTTGTCGCGGATGAAAACACCTATGACGTGCTTGGCGGGCGGGTCGCGCGC
GCGCTGAAACGCATCGGCAGCGAGCCGGCAATCGTTCTGAAAAACCCCCATGCGGACATGCAGACAGCAGCCGCACTGGC
GGACCAACTCAAGGGATATGACAGCGTCATCGCGGTCGGCTCAGGCACCCTCAACGATCTGTGCAAATACGTCACCGCAC
AGGACGGGCGGCGCTATGCGGTGTTTGCCACTGCGGCCTCGATGAACGGATATACGTCAACCACGGCCAGCATGACACTG
GATTCAGGTTTGAAGGTTTCGCTGCCCGCACAGGCGCCGGCGGGGTTCTTCGTGGATATGGCTGTCTCTGCCGCAGCACC
TTCGCATCTTACCGCATCGGGGTTTGCAGACTGCATTGCCCGCTCGGTCGCGCAGGTCGATTGGTGGATGTCGCACCGCG
TGCTCGGCACGCTTTATCGCTCCGTCCCGTTTGATATTCAAATCGCGGATGAAATCGAACTGAACAAATGTGCCCATCTT
TTGCCGAAAGGCGATATCGAAGCAACGGCACGGCTTTATCGCGTATTGACGCTCTGTGGTCTGGGCATCGGGTTTATCGG
CATGTCCAACCCCGGTTCCATGGGTGAGCATCAGATATCGCATTACATTGATTGCTTTGCAGGGGCGCGGCATCCCGGCA
CGCTGCATGGGCAACAGGTGGGTGTGGCCAGCCTGACCATGGCGCGCATTCAGCAGGGGCTTCTGGCGCAGGATAACGCA
CCGGTCATGAAACCGACGCCGATTGATACCGAAGGAATGAAACAGCGCATGGGGGGCGCCGCCGCCGACTGTATCCAACA
ATTGCAGCGCAAGGCACTGGACGGCGACGCCTTGGACGCGGTCAATCAGAAACTGGCCGCCCTGTGGCCGGAGTTGCAGC
GCGAATTGCGCCAATTCATGATCCCGGTCGAGGAGATGGAAAAACTGCTCTCGGATGCGGGCGCGCCGACGACCGCTGCG
GACCTCGGGATTGACCTTGAATTTTACCGCGAGGCCGTGCGCCATGGACATGAGATGCGAGACAGGTTCTCCTTTGTCGA
TATCGCCGCCAATGCCGGTCAGCTTGAGCAATTCATCGCAATCCAGACGTAG

Upstream 100 bases:

>100_bases
AACGCTGATACAGATGTATATTTGTAATTTACATTTGTAAATATACTGCTAGGTTAAGCCGACTTTCGCACATCAATCCA
GCAATGGGAGCAGCAACGCC

Downstream 100 bases:

>100_bases
GCCATTTCAGGGGAGGGTAAGATGAGCACAAAACCATTGGTCGCAATTACGGGCGCCAGTTCCGGTATCGGGGCCGCCGT
GGCAAAAACCTTTTCGGATG

Product: hypothetical protein

Products: NA

Alternate protein names: G1P dehydrogenase; G1PDH; Enantiomeric glycerophosphate synthase; sn-glycerol-1-phosphate dehydrogenase [H]

Number of amino acids: Translated: 443; Mature: 442

Protein sequence:

>443_residues
MGLAEIDSRNWTSLIDDIVTGDFYDAEAGKKVSVPYESIVFEQSLDGQEEALISRLKLGEKLAVVADENTYDVLGGRVAR
ALKRIGSEPAIVLKNPHADMQTAAALADQLKGYDSVIAVGSGTLNDLCKYVTAQDGRRYAVFATAASMNGYTSTTASMTL
DSGLKVSLPAQAPAGFFVDMAVSAAAPSHLTASGFADCIARSVAQVDWWMSHRVLGTLYRSVPFDIQIADEIELNKCAHL
LPKGDIEATARLYRVLTLCGLGIGFIGMSNPGSMGEHQISHYIDCFAGARHPGTLHGQQVGVASLTMARIQQGLLAQDNA
PVMKPTPIDTEGMKQRMGGAAADCIQQLQRKALDGDALDAVNQKLAALWPELQRELRQFMIPVEEMEKLLSDAGAPTTAA
DLGIDLEFYREAVRHGHEMRDRFSFVDIAANAGQLEQFIAIQT

Sequences:

>Translated_443_residues
MGLAEIDSRNWTSLIDDIVTGDFYDAEAGKKVSVPYESIVFEQSLDGQEEALISRLKLGEKLAVVADENTYDVLGGRVAR
ALKRIGSEPAIVLKNPHADMQTAAALADQLKGYDSVIAVGSGTLNDLCKYVTAQDGRRYAVFATAASMNGYTSTTASMTL
DSGLKVSLPAQAPAGFFVDMAVSAAAPSHLTASGFADCIARSVAQVDWWMSHRVLGTLYRSVPFDIQIADEIELNKCAHL
LPKGDIEATARLYRVLTLCGLGIGFIGMSNPGSMGEHQISHYIDCFAGARHPGTLHGQQVGVASLTMARIQQGLLAQDNA
PVMKPTPIDTEGMKQRMGGAAADCIQQLQRKALDGDALDAVNQKLAALWPELQRELRQFMIPVEEMEKLLSDAGAPTTAA
DLGIDLEFYREAVRHGHEMRDRFSFVDIAANAGQLEQFIAIQT
>Mature_442_residues
GLAEIDSRNWTSLIDDIVTGDFYDAEAGKKVSVPYESIVFEQSLDGQEEALISRLKLGEKLAVVADENTYDVLGGRVARA
LKRIGSEPAIVLKNPHADMQTAAALADQLKGYDSVIAVGSGTLNDLCKYVTAQDGRRYAVFATAASMNGYTSTTASMTLD
SGLKVSLPAQAPAGFFVDMAVSAAAPSHLTASGFADCIARSVAQVDWWMSHRVLGTLYRSVPFDIQIADEIELNKCAHLL
PKGDIEATARLYRVLTLCGLGIGFIGMSNPGSMGEHQISHYIDCFAGARHPGTLHGQQVGVASLTMARIQQGLLAQDNAP
VMKPTPIDTEGMKQRMGGAAADCIQQLQRKALDGDALDAVNQKLAALWPELQRELRQFMIPVEEMEKLLSDAGAPTTAAD
LGIDLEFYREAVRHGHEMRDRFSFVDIAANAGQLEQFIAIQT

Specific function: Catalyzes the NAD(P)H-dependent reduction of dihydroxyacetonephosphate (DHAP or glycerone phosphate) to glycerol-1-phosphate (G1P). The G1P thus generated is probably used for the synthesis of phosphoglycerolipids in Gram-positive bacterial species [H]

COG id: COG0371

COG function: function code C; Glycerol dehydrogenase and related enzymes

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycerol-1-phosphate dehydrogenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002658
- InterPro:   IPR023003 [H]

Pfam domain/function: PF01761 DHQ_synthase [H]

EC number: =1.1.1.261 [H]

Molecular weight: Translated: 47750; Mature: 47619

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLAEIDSRNWTSLIDDIVTGDFYDAEAGKKVSVPYESIVFEQSLDGQEEALISRLKLGE
CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEECCCHHHHHHHHCCCCHHHHHHHHHHCCC
KLAVVADENTYDVLGGRVARALKRIGSEPAIVLKNPHADMQTAAALADQLKGYDSVIAVG
EEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEEC
SGTLNDLCKYVTAQDGRRYAVFATAASMNGYTSTTASMTLDSGLKVSLPAQAPAGFFVDM
CCCHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCHHEEECCCCEEEECCCCCCCHHHHH
AVSAAAPSHLTASGFADCIARSVAQVDWWMSHRVLGTLYRSVPFDIQIADEIELNKCAHL
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHH
LPKGDIEATARLYRVLTLCGLGIGFIGMSNPGSMGEHQISHYIDCFAGARHPGTLHGQQV
CCCCCHHHHHHHHHHHHHHHCCHHEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
GVASLTMARIQQGLLAQDNAPVMKPTPIDTEGMKQRMGGAAADCIQQLQRKALDGDALDA
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHH
VNQKLAALWPELQRELRQFMIPVEEMEKLLSDAGAPTTAADLGIDLEFYREAVRHGHEMR
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHCCHHHH
DRFSFVDIAANAGQLEQFIAIQT
HHHHHHHHHCCCHHHHHHHEECC
>Mature Secondary Structure 
GLAEIDSRNWTSLIDDIVTGDFYDAEAGKKVSVPYESIVFEQSLDGQEEALISRLKLGE
CCCCCCCCCHHHHHHHHHCCCCCCCCCCCEECCCHHHHHHHHCCCCHHHHHHHHHHCCC
KLAVVADENTYDVLGGRVARALKRIGSEPAIVLKNPHADMQTAAALADQLKGYDSVIAVG
EEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEEC
SGTLNDLCKYVTAQDGRRYAVFATAASMNGYTSTTASMTLDSGLKVSLPAQAPAGFFVDM
CCCHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCHHEEECCCCEEEECCCCCCCHHHHH
AVSAAAPSHLTASGFADCIARSVAQVDWWMSHRVLGTLYRSVPFDIQIADEIELNKCAHL
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHH
LPKGDIEATARLYRVLTLCGLGIGFIGMSNPGSMGEHQISHYIDCFAGARHPGTLHGQQV
CCCCCHHHHHHHHHHHHHHHCCHHEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
GVASLTMARIQQGLLAQDNAPVMKPTPIDTEGMKQRMGGAAADCIQQLQRKALDGDALDA
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHH
VNQKLAALWPELQRELRQFMIPVEEMEKLLSDAGAPTTAADLGIDLEFYREAVRHGHEMR
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHCCHHHH
DRFSFVDIAANAGQLEQFIAIQT
HHHHHHHHHCCCHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA