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The map label for this gene is fmdB [H]

Identifier: 110680760

GI number: 110680760

Start: 3468200

End: 3468529

Strand: Direct

Name: fmdB [H]

Synonym: RD1_3603

Alternate gene names: 110680760

Gene position: 3468200-3468529 (Clockwise)

Preceding gene: 110680759

Following gene: 110680762

Centisome position: 83.91

GC content: 56.97

Gene sequence:

>330_bases
ATGCCTCTTTATGACTACTTCTGTGATGACTGCGGTCCGTTCACAGCCTTTGCCTCACTCGATAACTTTCAGGACCCCTG
CGATTGCCCGCACTGCGCAACAACCGCGCCGCGCGTCCTGATGAACGCCCCGCGCCTTGCCGTGATGTCCAGTGGCGCAC
GCCGCGCCCATGAAACCAATGAACGCAGCGCGGATAGCCCGAAACGCTCCAATCATGGGCCCGGATGTTCCTGTTGTTCA
TCCTCCAAAGCGCGCCCCTCAAAGACGTTGCATCATGCAAATGGCGCAAAATCATTTCCAACCAAGCGGCCCTGGATGAT
TTCTCATTAG

Upstream 100 bases:

>100_bases
GCTCCGTCGATATGCCAATCGCCCACGATCTTTAATTCCAAACGCCGAGCGATGTGCCATGCGCATCGCTCGCCCATCCT
GAATGCAGCCGGAGCCGACC

Downstream 100 bases:

>100_bases
AGCGTCTGACGAAGTATCTGAAGGATCAAGGATCACGCAACACGTTGAAATCCTTGATTTCGGGCGGCGTTGCGCGATCA
AGGTTTTTCGCATGACGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 108

Protein sequence:

>109_residues
MPLYDYFCDDCGPFTAFASLDNFQDPCDCPHCATTAPRVLMNAPRLAVMSSGARRAHETNERSADSPKRSNHGPGCSCCS
SSKARPSKTLHHANGAKSFPTKRPWMISH

Sequences:

>Translated_109_residues
MPLYDYFCDDCGPFTAFASLDNFQDPCDCPHCATTAPRVLMNAPRLAVMSSGARRAHETNERSADSPKRSNHGPGCSCCS
SSKARPSKTLHHANGAKSFPTKRPWMISH
>Mature_108_residues
PLYDYFCDDCGPFTAFASLDNFQDPCDCPHCATTAPRVLMNAPRLAVMSSGARRAHETNERSADSPKRSNHGPGCSCCSS
SKARPSKTLHHANGAKSFPTKRPWMISH

Specific function: May be a positive regulator of formamidase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013429 [H]

Pfam domain/function: PF09723 CxxC_CxxC_SSSS [H]

EC number: NA

Molecular weight: Translated: 11914; Mature: 11783

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
11.0 %Cys+Met (Translated Protein)
7.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
10.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLYDYFCDDCGPFTAFASLDNFQDPCDCPHCATTAPRVLMNAPRLAVMSSGARRAHETN
CCCCHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCEECCCCCHHHHHCC
ERSADSPKRSNHGPGCSCCSSSKARPSKTLHHANGAKSFPTKRPWMISH
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PLYDYFCDDCGPFTAFASLDNFQDPCDCPHCATTAPRVLMNAPRLAVMSSGARRAHETN
CCCHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCEECCCCCHHHHHCC
ERSADSPKRSNHGPGCSCCSSSKARPSKTLHHANGAKSFPTKRPWMISH
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8841393 [H]