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The map label for this gene is fmdA [H]

Identifier: 110680759

GI number: 110680759

Start: 3466905

End: 3468134

Strand: Direct

Name: fmdA [H]

Synonym: RD1_3602

Alternate gene names: 110680759

Gene position: 3466905-3468134 (Clockwise)

Preceding gene: 110680758

Following gene: 110680760

Centisome position: 83.88

GC content: 56.67

Gene sequence:

>1230_bases
ATGGCAGACACATTGATCTCAGTAGATCTGAGCGAAAGCCCGCATACGAACGAGAATGTGCACAACCGCTGGCACCCGGA
CATTCCGATCAACGTCTGGGTCGAACCCGGCGACGATTTCAAGATCGAGACCTATGACTGGACCGGCGGTCAGATCAAGA
ATGACGACGACGCCGCTGATGTGCGTGATGTCGAACTGGAGCAGGTACACTACCTCTCCGGTCCCATCGGGGTGAAGGGC
GCAGAGCCCGGCGATCTGCTGGTCGTGGATATCCTCGATATTGGTGCTGTCGAGGAAATGAACTGGGGCTTCAACGGCTT
CTTCTCCAAGAATAACGGTGGTGGGTTCCTGACCGATCACTTCCCATCGGCGCAGAAATCAATCTGGGATTTCGACGGTA
TGTTCACCAAATCCCGCCACGTGCCGGGGGTGAAATACGCGGGGTTGATCCACCCGGGTCTCATTGGCTGTTTGCCCGAC
CGCAAGATGCTGGACATGTGGAACACGCGCGAAACCAAGCTCTTCAATACGGACCCCGAGCGCGTACCGCCGCTTGCAGC
TTTGCCAAATACGCAAAGCGCGCATATGGGCGCCATGAAAGGTGAGACACGCGATGCCGCCGCCGCAGAGGCCGCCCGCA
CCGTCCCCCCGCGCGAACATGGCGGGAATTGCGACATCAAGGATCTGAGCCGCGGCTGCAAGATCTATTTCCCGGTTTAT
GTAGATGGCGCCGGGCTTTCCATGGGCGATTTGCACTTCAGTCAAGGCGACGGCGAGATCACGTTTTGCGGGGCCATCGA
GATGGCAGGCTGGCTGCATCTCAAGGTCGAGATCATCAAGGATGGCATGGCGAAATACGGGATCAAGAACCCGATCTTCA
AACCGTCTCCGATCAAACCGGTTTATGACGACTACCTGATCTTTGAAGGGATTTCGGTCGATGAGAGTGGCGAACAGCAC
TATCTGGATGTGCATATCGCTTACCGGCAGGCCTGTCTGAACGCGATCGAGTACCTCAAGAAATTCGGCTACACCGGTGC
GCAGGCCTATTCCATTCTGGGCACCGCGCCGGTGCAGGGCCATATCTCGGGCGTGGTGGATATACCCAACGCCTGCGCCA
CGCTCTGGCTGCCAAATGACATCTTTGAATGGGATATGATGCCAAATGCGAATGGGCCGACCAAATATCTTGACGGCTCC
GTCGATATGCCAATCGCCCACGATCTTTAA

Upstream 100 bases:

>100_bases
GAACGGCACCTTTGTGCATGACAGCCCCCGCGATGGCATCGACGAAGAGCGCGTCTCGAAATTTCTATCCGTTTAATACC
AAGAAGAGAGGAGCTACCCC

Downstream 100 bases:

>100_bases
TTCCAAACGCCGAGCGATGTGCCATGCGCATCGCTCGCCCATCCTGAATGCAGCCGGAGCCGACCATGCCTCTTTATGAC
TACTTCTGTGATGACTGCGG

Product: amidase

Products: NA

Alternate protein names: Formamide amidohydrolase [H]

Number of amino acids: Translated: 409; Mature: 408

Protein sequence:

>409_residues
MADTLISVDLSESPHTNENVHNRWHPDIPINVWVEPGDDFKIETYDWTGGQIKNDDDAADVRDVELEQVHYLSGPIGVKG
AEPGDLLVVDILDIGAVEEMNWGFNGFFSKNNGGGFLTDHFPSAQKSIWDFDGMFTKSRHVPGVKYAGLIHPGLIGCLPD
RKMLDMWNTRETKLFNTDPERVPPLAALPNTQSAHMGAMKGETRDAAAAEAARTVPPREHGGNCDIKDLSRGCKIYFPVY
VDGAGLSMGDLHFSQGDGEITFCGAIEMAGWLHLKVEIIKDGMAKYGIKNPIFKPSPIKPVYDDYLIFEGISVDESGEQH
YLDVHIAYRQACLNAIEYLKKFGYTGAQAYSILGTAPVQGHISGVVDIPNACATLWLPNDIFEWDMMPNANGPTKYLDGS
VDMPIAHDL

Sequences:

>Translated_409_residues
MADTLISVDLSESPHTNENVHNRWHPDIPINVWVEPGDDFKIETYDWTGGQIKNDDDAADVRDVELEQVHYLSGPIGVKG
AEPGDLLVVDILDIGAVEEMNWGFNGFFSKNNGGGFLTDHFPSAQKSIWDFDGMFTKSRHVPGVKYAGLIHPGLIGCLPD
RKMLDMWNTRETKLFNTDPERVPPLAALPNTQSAHMGAMKGETRDAAAAEAARTVPPREHGGNCDIKDLSRGCKIYFPVY
VDGAGLSMGDLHFSQGDGEITFCGAIEMAGWLHLKVEIIKDGMAKYGIKNPIFKPSPIKPVYDDYLIFEGISVDESGEQH
YLDVHIAYRQACLNAIEYLKKFGYTGAQAYSILGTAPVQGHISGVVDIPNACATLWLPNDIFEWDMMPNANGPTKYLDGS
VDMPIAHDL
>Mature_408_residues
ADTLISVDLSESPHTNENVHNRWHPDIPINVWVEPGDDFKIETYDWTGGQIKNDDDAADVRDVELEQVHYLSGPIGVKGA
EPGDLLVVDILDIGAVEEMNWGFNGFFSKNNGGGFLTDHFPSAQKSIWDFDGMFTKSRHVPGVKYAGLIHPGLIGCLPDR
KMLDMWNTRETKLFNTDPERVPPLAALPNTQSAHMGAMKGETRDAAAAEAARTVPPREHGGNCDIKDLSRGCKIYFPVYV
DGAGLSMGDLHFSQGDGEITFCGAIEMAGWLHLKVEIIKDGMAKYGIKNPIFKPSPIKPVYDDYLIFEGISVDESGEQHY
LDVHIAYRQACLNAIEYLKKFGYTGAQAYSILGTAPVQGHISGVVDIPNACATLWLPNDIFEWDMMPNANGPTKYLDGSV
DMPIAHDL

Specific function: Hydrolyzes formamide with the production of ammonia which can be used as a source of nitrogen for growth. Also acts, more slowly, on acetamide, propanamide and butanamide [H]

COG id: COG2421

COG function: function code C; Predicted acetamidase/formamidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acetamidase/formamidase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004304 [H]

Pfam domain/function: PF03069 FmdA_AmdA [H]

EC number: =3.5.1.49 [H]

Molecular weight: Translated: 45037; Mature: 44906

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADTLISVDLSESPHTNENVHNRWHPDIPINVWVEPGDDFKIETYDWTGGQIKNDDDAAD
CCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEECCCCCCCC
VRDVELEQVHYLSGPIGVKGAEPGDLLVVDILDIGAVEEMNWGFNGFFSKNNGGGFLTDH
CCCCCHHHEEEECCCCCCCCCCCCCEEEEEEECCCCEECCCCCCCEEEECCCCCEEEECC
FPSAQKSIWDFDGMFTKSRHVPGVKYAGLIHPGLIGCLPDRKMLDMWNTRETKLFNTDPE
CCCHHHHHHCCCCCEECCCCCCCCEECCCCCCCCEECCCCCHHHHHCCCCCCEEECCCHH
RVPPLAALPNTQSAHMGAMKGETRDAAAAEAARTVPPREHGGNCDIKDLSRGCKIYFPVY
HCCCCEECCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHCCCCEEEEEEE
VDGAGLSMGDLHFSQGDGEITFCGAIEMAGWLHLKVEIIKDGMAKYGIKNPIFKPSPIKP
ECCCCCEECCEEEECCCCCEEEEEEECCCCEEEEEEEEECCCHHHCCCCCCCCCCCCCCC
VYDDYLIFEGISVDESGEQHYLDVHIAYRQACLNAIEYLKKFGYTGAQAYSILGTAPVQG
CCCCEEEEECCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCC
HISGVVDIPNACATLWLPNDIFEWDMMPNANGPTKYLDGSVDMPIAHDL
CCEEEEECCCCEEEEECCCCCEEEECCCCCCCCCEEECCCCCCCHHCCC
>Mature Secondary Structure 
ADTLISVDLSESPHTNENVHNRWHPDIPINVWVEPGDDFKIETYDWTGGQIKNDDDAAD
CCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEECCCCCCCC
VRDVELEQVHYLSGPIGVKGAEPGDLLVVDILDIGAVEEMNWGFNGFFSKNNGGGFLTDH
CCCCCHHHEEEECCCCCCCCCCCCCEEEEEEECCCCEECCCCCCCEEEECCCCCEEEECC
FPSAQKSIWDFDGMFTKSRHVPGVKYAGLIHPGLIGCLPDRKMLDMWNTRETKLFNTDPE
CCCHHHHHHCCCCCEECCCCCCCCEECCCCCCCCEECCCCCHHHHHCCCCCCEEECCCHH
RVPPLAALPNTQSAHMGAMKGETRDAAAAEAARTVPPREHGGNCDIKDLSRGCKIYFPVY
HCCCCEECCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHCCCCEEEEEEE
VDGAGLSMGDLHFSQGDGEITFCGAIEMAGWLHLKVEIIKDGMAKYGIKNPIFKPSPIKP
ECCCCCEECCEEEECCCCCEEEEEEECCCCEEEEEEEEECCCHHHCCCCCCCCCCCCCCC
VYDDYLIFEGISVDESGEQHYLDVHIAYRQACLNAIEYLKKFGYTGAQAYSILGTAPVQG
CCCCEEEEECCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCC
HISGVVDIPNACATLWLPNDIFEWDMMPNANGPTKYLDGSVDMPIAHDL
CCEEEEECCCCEEEEECCCCCEEEECCCCCCCCCEEECCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8841393 [H]