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The map label for this gene is pucC [H]

Identifier: 110680705

GI number: 110680705

Start: 3411599

End: 3413056

Strand: Direct

Name: pucC [H]

Synonym: RD1_3545

Alternate gene names: 110680705

Gene position: 3411599-3413056 (Clockwise)

Preceding gene: 110680704

Following gene: 110680706

Centisome position: 82.54

GC content: 61.18

Gene sequence:

>1458_bases
ATGTTCGAGTATCGCGCATTTGCCTTACGAAAGCTGGTTTCGATCGCGCCGCGCTATTTGCCATTCGCGGACGTCGCCAC
CAAAGAAGTGCCGCTGTCCCGCCTGCTGCGCCTCTCCCTCTTCCAAGTCACCGTTGGCATGGCCATCGTGCTGCTTGTCG
GCACTTTGAACCGCGTCATGATCGTCGAACTCAGTGTTCCGGCGACGCTTGTCGCGATGATGCTCGCCCTGCCCCTGTTG
TTCGCCCCGTTTCGCACGTTGATCGGCTATAAATCCGATGTGAACGTCTCCGCGCTTGGGCTGCGCCGGGTCCCGTTCAT
CTGGAAGGGGACGCTGTATCAATTCGGTGGCTTTGCCATCATGCCTTTCGCGCTGCTGGTCTTGTCAGGCTACGGCGAAG
CGGTCGATGCGCCTCGCTGGATGGGCTTGTCAGCTGCTGCGCTCGCGTTCCTGCTGGTGGGCGCTGGCGTGCATATGGTC
CAGACCGTGGGCCTTGCACTGGCCACGGATCTGGTCGCGGACGAAGATCAGCCAAAAGTCGTGGGCCTGATGTATGTCAT
GCTGCTTGTCGGCATGGTGCTCAGCGCGCTGGTCTTTGGCACATTGCTGGAAAACTATACGCCGGGGCGCCTCATACAGG
TCATTCAGGGGGCGGCGGTCATGACTGTCGCGCTGAACCTGTTCGCGCTTTGGAAACAAGAGGCGCGGGATCGGGTCCGC
GCGCAAAAGATGCAGACGGCGCAACACGCGCCCTTTCGCGAAACTCTGGCCGAACTGGTCCAGAAGCCCGGCCGCAAACG
GCTTTTAGTTGTCATCGCACTTGGCACCTTTGGCTTTGGGGCCGCTGATGTGCTGCTTGAACCTTATGGCGCGCAGGCGC
TCGGGTTTTCGGTAGCGGAAACGACACGGCTGACCGCCCTTTTGGCGGGTGGCACGTTGATCGGCTTTGGCATCGCCTCG
CGCGTTCTGAGCGAGAATGGCGCGGCCACACGGCTCGGGCTGATCGGTGCGCTGATCGGGATACCGGGGTTTTCCGGCAT
CATCCTGTCGGCTTTTGGCGGCGGTGCGCCGCTGTTTCTGGCTGGAACACTGGCAACAGGTATCGGCGCGGGCCTCTTTG
GTCATGCCACATTGACCGCGACCATGCGCTCGGCTGAGCGTGAACAGATCGGCCTTGCGCTCGGCACTTGGGGTGCCGTT
CAGGCAACAGCCGCTGGTGTCGGTGTGGCGCTGGCAGGCATCGTGCGCGACATCATCGTCAACATGTCCACCTATGCCGA
CCTGCCCGCGCATGCACCCTATAATGCGGTTTTCCTGATCGAGATTGTTTTCCTCGCGCTCGCATGCGCTACACTCATAC
CTCTGTGCGGCAAAGCAAGGACGGCGCAGCACCCGGGTATTCACCCATCCAAGCGGTCCATACCGGATCCGCATCCTAAA
TCGGCGGAGGCATCATGA

Upstream 100 bases:

>100_bases
CGCGCGGTCCCTCGCCCTTGTGGCGGGGGGCTTGCGACACCCATACCTGCGGGGTCACTGCACCAGCAGGTCCAATTTGA
ATAAGAATGGCGGGAGGATA

Downstream 100 bases:

>100_bases
CACAAGTCATTACGCGATATTTTGAAAACGCGGCACAGGCGTCATTGATAAAACGAACACTCACTGTGGAGCGGTTTCCC
GGACGCGACCTGAAGGTATT

Product: PucC protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 485; Mature: 485

Protein sequence:

>485_residues
MFEYRAFALRKLVSIAPRYLPFADVATKEVPLSRLLRLSLFQVTVGMAIVLLVGTLNRVMIVELSVPATLVAMMLALPLL
FAPFRTLIGYKSDVNVSALGLRRVPFIWKGTLYQFGGFAIMPFALLVLSGYGEAVDAPRWMGLSAAALAFLLVGAGVHMV
QTVGLALATDLVADEDQPKVVGLMYVMLLVGMVLSALVFGTLLENYTPGRLIQVIQGAAVMTVALNLFALWKQEARDRVR
AQKMQTAQHAPFRETLAELVQKPGRKRLLVVIALGTFGFGAADVLLEPYGAQALGFSVAETTRLTALLAGGTLIGFGIAS
RVLSENGAATRLGLIGALIGIPGFSGIILSAFGGGAPLFLAGTLATGIGAGLFGHATLTATMRSAEREQIGLALGTWGAV
QATAAGVGVALAGIVRDIIVNMSTYADLPAHAPYNAVFLIEIVFLALACATLIPLCGKARTAQHPGIHPSKRSIPDPHPK
SAEAS

Sequences:

>Translated_485_residues
MFEYRAFALRKLVSIAPRYLPFADVATKEVPLSRLLRLSLFQVTVGMAIVLLVGTLNRVMIVELSVPATLVAMMLALPLL
FAPFRTLIGYKSDVNVSALGLRRVPFIWKGTLYQFGGFAIMPFALLVLSGYGEAVDAPRWMGLSAAALAFLLVGAGVHMV
QTVGLALATDLVADEDQPKVVGLMYVMLLVGMVLSALVFGTLLENYTPGRLIQVIQGAAVMTVALNLFALWKQEARDRVR
AQKMQTAQHAPFRETLAELVQKPGRKRLLVVIALGTFGFGAADVLLEPYGAQALGFSVAETTRLTALLAGGTLIGFGIAS
RVLSENGAATRLGLIGALIGIPGFSGIILSAFGGGAPLFLAGTLATGIGAGLFGHATLTATMRSAEREQIGLALGTWGAV
QATAAGVGVALAGIVRDIIVNMSTYADLPAHAPYNAVFLIEIVFLALACATLIPLCGKARTAQHPGIHPSKRSIPDPHPK
SAEAS
>Mature_485_residues
MFEYRAFALRKLVSIAPRYLPFADVATKEVPLSRLLRLSLFQVTVGMAIVLLVGTLNRVMIVELSVPATLVAMMLALPLL
FAPFRTLIGYKSDVNVSALGLRRVPFIWKGTLYQFGGFAIMPFALLVLSGYGEAVDAPRWMGLSAAALAFLLVGAGVHMV
QTVGLALATDLVADEDQPKVVGLMYVMLLVGMVLSALVFGTLLENYTPGRLIQVIQGAAVMTVALNLFALWKQEARDRVR
AQKMQTAQHAPFRETLAELVQKPGRKRLLVVIALGTFGFGAADVLLEPYGAQALGFSVAETTRLTALLAGGTLIGFGIAS
RVLSENGAATRLGLIGALIGIPGFSGIILSAFGGGAPLFLAGTLATGIGAGLFGHATLTATMRSAEREQIGLALGTWGAV
QATAAGVGVALAGIVRDIIVNMSTYADLPAHAPYNAVFLIEIVFLALACATLIPLCGKARTAQHPGIHPSKRSIPDPHPK
SAEAS

Specific function: PucC is required for high-level transcription of the puc operon [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pucC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016196
- InterPro:   IPR004896 [H]

Pfam domain/function: PF03209 PUCC [H]

EC number: NA

Molecular weight: Translated: 51025; Mature: 51025

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEYRAFALRKLVSIAPRYLPFADVATKEVPLSRLLRLSLFQVTVGMAIVLLVGTLNRVM
CCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
IVELSVPATLVAMMLALPLLFAPFRTLIGYKSDVNVSALGLRRVPFIWKGTLYQFGGFAI
EEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHCCCEEECCHHHHHCCHHH
MPFALLVLSGYGEAVDAPRWMGLSAAALAFLLVGAGVHMVQTVGLALATDLVADEDQPKV
HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHH
VGLMYVMLLVGMVLSALVFGTLLENYTPGRLIQVIQGAAVMTVALNLFALWKQEARDRVR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
AQKMQTAQHAPFRETLAELVQKPGRKRLLVVIALGTFGFGAADVLLEPYGAQALGFSVAE
HHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHCCCCCCHHHCCHHHH
TTRLTALLAGGTLIGFGIASRVLSENGAATRLGLIGALIGIPGFSGIILSAFGGGAPLFL
HHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHH
AGTLATGIGAGLFGHATLTATMRSAEREQIGLALGTWGAVQATAAGVGVALAGIVRDIIV
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCEEEECCCHHHHHHHHHHHHHHHHHHHHHH
NMSTYADLPAHAPYNAVFLIEIVFLALACATLIPLCGKARTAQHPGIHPSKRSIPDPHPK
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
SAEAS
CCCCC
>Mature Secondary Structure
MFEYRAFALRKLVSIAPRYLPFADVATKEVPLSRLLRLSLFQVTVGMAIVLLVGTLNRVM
CCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
IVELSVPATLVAMMLALPLLFAPFRTLIGYKSDVNVSALGLRRVPFIWKGTLYQFGGFAI
EEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHCCCEEECCHHHHHCCHHH
MPFALLVLSGYGEAVDAPRWMGLSAAALAFLLVGAGVHMVQTVGLALATDLVADEDQPKV
HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHH
VGLMYVMLLVGMVLSALVFGTLLENYTPGRLIQVIQGAAVMTVALNLFALWKQEARDRVR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
AQKMQTAQHAPFRETLAELVQKPGRKRLLVVIALGTFGFGAADVLLEPYGAQALGFSVAE
HHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHCCCCCCHHHCCHHHH
TTRLTALLAGGTLIGFGIASRVLSENGAATRLGLIGALIGIPGFSGIILSAFGGGAPLFL
HHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHH
AGTLATGIGAGLFGHATLTATMRSAEREQIGLALGTWGAVQATAAGVGVALAGIVRDIIV
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCEEEECCCHHHHHHHHHHHHHHHHHHHHHH
NMSTYADLPAHAPYNAVFLIEIVFLALACATLIPLCGKARTAQHPGIHPSKRSIPDPHPK
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
SAEAS
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2549005; 1717257; 8759841 [H]