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The map label for this gene is pucB [H]

Identifier: 110680703

GI number: 110680703

Start: 3410974

End: 3411129

Strand: Direct

Name: pucB [H]

Synonym: RD1_3543

Alternate gene names: 110680703

Gene position: 3410974-3411129 (Clockwise)

Preceding gene: 110680702

Following gene: 110680704

Centisome position: 82.53

GC content: 55.13

Gene sequence:

>156_bases
ATGTCCGACGACCCAGACAAAGTTTGGCCGACCGGTCTTACACTACTCGAAGCCGAAGAAGTTCACAGCTACCTGATTGA
TGGTACCCGTGTCTTTGGTGCAATCGCACTCGTTGCCCACATGCTTGTCGCTGCGTCGACGCCGTGGCTCGGATAA

Upstream 100 bases:

>100_bases
GTCCGAGTGTGCGCGTCGCGACCAATGAGCTGCATGGCAGTACCCCGTTCCTTTCGGAAACTGCGATGTACTTGGTTAGA
AGCTGAATTGGAGAACCATT

Downstream 100 bases:

>100_bases
GGGGGAAAACACATGAACAATGCAAAAATGTGGCTTGTCGTTTCCCCATCTGTCGGCGTTCCGGTCTTTCTGGGCGCAGT
CGCTGTAGGCTCATTCGCGG

Product: light-harvesting protein B-800/850, beta chain

Products: NA

Alternate protein names: Antenna pigment protein beta chain; LH-3B [H]

Number of amino acids: Translated: 51; Mature: 50

Protein sequence:

>51_residues
MSDDPDKVWPTGLTLLEAEEVHSYLIDGTRVFGAIALVAHMLVAASTPWLG

Sequences:

>Translated_51_residues
MSDDPDKVWPTGLTLLEAEEVHSYLIDGTRVFGAIALVAHMLVAASTPWLG
>Mature_50_residues
SDDPDKVWPTGLTLLEAEEVHSYLIDGTRVFGAIALVAHMLVAASTPWLG

Specific function: Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the antena complex beta subunit family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000066
- InterPro:   IPR002362 [H]

Pfam domain/function: PF00556 LHC [H]

EC number: NA

Molecular weight: Translated: 5495; Mature: 5364

Theoretical pI: Translated: 4.17; Mature: 4.17

Prosite motif: PS00969 ANTENNA_COMP_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDDPDKVWPTGLTLLEAEEVHSYLIDGTRVFGAIALVAHMLVAASTPWLG
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SDDPDKVWPTGLTLLEAEEVHSYLIDGTRVFGAIALVAHMLVAASTPWLG
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9130598; 7628614 [H]