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The map label for this gene is ycgN [C]

Identifier: 110680685

GI number: 110680685

Start: 3386104

End: 3386574

Strand: Direct

Name: ycgN [C]

Synonym: RD1_3524

Alternate gene names: 110680685

Gene position: 3386104-3386574 (Clockwise)

Preceding gene: 110680684

Following gene: 110680686

Centisome position: 81.93

GC content: 60.08

Gene sequence:

>471_bases
ATGAGCGACCCGATTGACCGCAAGGGCCTCAAGGACCGCTATTGGGAGCGCAAGCCGCTGTCCGCGATGAACCAGCGCGA
GTGGGAAGCACTGTGCGATGGATGCGGGAAATGCTGCCTGAACAAACTTGAGGACGAAGACACCGGCGAGGTGGCCCTCA
CGCGCATCGCCTGCCGCCTGCTGGATGATGACAGCTGCCGCTGCGCGCATTATGAAAACCGGCACCAATTCGTGCCTGAC
TGCATTGTTCTCAAACCTGACAACCTCGACACCCACGCCTATTGGATGCCCCAAACCTGCGCCTATCGCCTCTTGTGGCA
AGGCGATGCGCTGCCTGACTGGCACCCGCTGATCTCAGGCACGGCGCAATCCGTCCATGACGCGGGCATCTCGGTGCGTG
GCATCACACTGAGCGAATTCGATGTCCCGCAGGACGAATGGGAAGAACATATCATTGAGGAGCCGTCCTGA

Upstream 100 bases:

>100_bases
TGGAACATCTGCGGCCAGAACTCAAATTCGACGGGCTGGATGCGTTGATTGCGCAAATGGATCAGGACAGCACCGCCGCG
CGCACCATTCTGGACGCTTT

Downstream 100 bases:

>100_bases
TGTATCTCGCCTCTGACAACACCGGACCCGCACACCCGCAAGTGATGGAACATGTGCTGGCTGCCAATGAAGGCTACGCT
ATGCCCTACGGCGCAGACCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:

>156_residues
MSDPIDRKGLKDRYWERKPLSAMNQREWEALCDGCGKCCLNKLEDEDTGEVALTRIACRLLDDDSCRCAHYENRHQFVPD
CIVLKPDNLDTHAYWMPQTCAYRLLWQGDALPDWHPLISGTAQSVHDAGISVRGITLSEFDVPQDEWEEHIIEEPS

Sequences:

>Translated_156_residues
MSDPIDRKGLKDRYWERKPLSAMNQREWEALCDGCGKCCLNKLEDEDTGEVALTRIACRLLDDDSCRCAHYENRHQFVPD
CIVLKPDNLDTHAYWMPQTCAYRLLWQGDALPDWHPLISGTAQSVHDAGISVRGITLSEFDVPQDEWEEHIIEEPS
>Mature_155_residues
SDPIDRKGLKDRYWERKPLSAMNQREWEALCDGCGKCCLNKLEDEDTGEVALTRIACRLLDDDSCRCAHYENRHQFVPDC
IVLKPDNLDTHAYWMPQTCAYRLLWQGDALPDWHPLISGTAQSVHDAGISVRGITLSEFDVPQDEWEEHIIEEPS

Specific function: Unknown

COG id: COG2983

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0260 family [H]

Homologues:

Organism=Escherichia coli, GI145693117, Length=142, Percent_Identity=50, Blast_Score=150, Evalue=3e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008228
- InterPro:   IPR005358 [H]

Pfam domain/function: PF03692 UPF0153 [H]

EC number: NA

Molecular weight: Translated: 17960; Mature: 17829

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
5.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDPIDRKGLKDRYWERKPLSAMNQREWEALCDGCGKCCLNKLEDEDTGEVALTRIACRL
CCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
LDDDSCRCAHYENRHQFVPDCIVLKPDNLDTHAYWMPQTCAYRLLWQGDALPDWHPLISG
CCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEECCHHHHHHHEECCCCCCCCHHHHCC
TAQSVHDAGISVRGITLSEFDVPQDEWEEHIIEEPS
CHHHHHHCCCEEEEEEECCCCCCHHHHHHHHCCCCC
>Mature Secondary Structure 
SDPIDRKGLKDRYWERKPLSAMNQREWEALCDGCGKCCLNKLEDEDTGEVALTRIACRL
CCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
LDDDSCRCAHYENRHQFVPDCIVLKPDNLDTHAYWMPQTCAYRLLWQGDALPDWHPLISG
CCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEECCHHHHHHHEECCCCCCCCHHHHCC
TAQSVHDAGISVRGITLSEFDVPQDEWEEHIIEEPS
CHHHHHHCCCEEEEEEECCCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9256491 [H]