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The map label for this gene is 110680680

Identifier: 110680680

GI number: 110680680

Start: 3381824

End: 3382537

Strand: Direct

Name: 110680680

Synonym: RD1_3519

Alternate gene names: NA

Gene position: 3381824-3382537 (Clockwise)

Preceding gene: 110680675

Following gene: 110680681

Centisome position: 81.82

GC content: 56.86

Gene sequence:

>714_bases
ATGGCAGCTACAATAATCGCGGGCGCCGGATCGGCGGGTGTGATTTCTGGCGACTACCGAGCATCCTCTGCGATTGGATC
GGGAACGCAAACATCAGACCATAGCTTGTGGATCCAAAACGGCCTTGGCGGCGCCATTGGCAGTGACTTCGACTTTTCGC
CCGACGGGCTTCTAAGCGTTTTGGGCGATGGCACGATGAACCTGTCCGGCACCGTCATTTCACAAGACAATGCGAACGCG
GGTTTCGTCATCAGCTTCGATTACAATAATGTTTTTGAAACGGCTGGCGGCACGGCGTTCACACCGACGTTCAAAAGCGA
AAACGGATCAGCATCGGCGCCCGATACGATACTGCGCAATTTGACCGGTGGCACGATGATGGGCACCGGAATTCTGGCTG
GTTTGAACCTCAGCGTGACGCGGTTGCCGGAAAATGGAAGTGACGCCACGCAAGTCGGGTCAAGCCCGGCAGCGGGAATC
CGCGGCGCAAACAACAAGAACGAAAACCTGGGCATGGCGAACTGGTTCAAAATCGCTGTTACGTCGAGCAACTGCGGCAC
TTTTTGCACCAATAACGCATCGGACATTTCGAGCCTTGCCGGCCGACAGGGCGATATCAACGTAGATCTCGCACCGGTGC
CTTTGCCTGCCGGCATGTTGCTTTTGCTGACAGGTATTGGCGGTCTGGCCGCCGCGCGCCGCCGCAAAAGCTGA

Upstream 100 bases:

>100_bases
GGCGGCCCGGAGGGTGTAGGGTTAACGAATAATTAAAAAATAAAGTTAACGAAACTGGGACAATCAAACCATGAAAATTA
GAACAACGATAGCGGCTGCA

Downstream 100 bases:

>100_bases
ACCCGCCAAAGTGACAAGGCCGCGCCCAATTAGGGCGCGGTTTTTTCATGTCCGCCATTCAGCCAAGTAAAAATGCCGCG
CCGCAGCATTGATGGGGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 236

Protein sequence:

>237_residues
MAATIIAGAGSAGVISGDYRASSAIGSGTQTSDHSLWIQNGLGGAIGSDFDFSPDGLLSVLGDGTMNLSGTVISQDNANA
GFVISFDYNNVFETAGGTAFTPTFKSENGSASAPDTILRNLTGGTMMGTGILAGLNLSVTRLPENGSDATQVGSSPAAGI
RGANNKNENLGMANWFKIAVTSSNCGTFCTNNASDISSLAGRQGDINVDLAPVPLPAGMLLLLTGIGGLAAARRRKS

Sequences:

>Translated_237_residues
MAATIIAGAGSAGVISGDYRASSAIGSGTQTSDHSLWIQNGLGGAIGSDFDFSPDGLLSVLGDGTMNLSGTVISQDNANA
GFVISFDYNNVFETAGGTAFTPTFKSENGSASAPDTILRNLTGGTMMGTGILAGLNLSVTRLPENGSDATQVGSSPAAGI
RGANNKNENLGMANWFKIAVTSSNCGTFCTNNASDISSLAGRQGDINVDLAPVPLPAGMLLLLTGIGGLAAARRRKS
>Mature_236_residues
AATIIAGAGSAGVISGDYRASSAIGSGTQTSDHSLWIQNGLGGAIGSDFDFSPDGLLSVLGDGTMNLSGTVISQDNANAG
FVISFDYNNVFETAGGTAFTPTFKSENGSASAPDTILRNLTGGTMMGTGILAGLNLSVTRLPENGSDATQVGSSPAAGIR
GANNKNENLGMANWFKIAVTSSNCGTFCTNNASDISSLAGRQGDINVDLAPVPLPAGMLLLLTGIGGLAAARRRKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23770; Mature: 23638

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAATIIAGAGSAGVISGDYRASSAIGSGTQTSDHSLWIQNGLGGAIGSDFDFSPDGLLSV
CCEEEEECCCCCCEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHH
LGDGTMNLSGTVISQDNANAGFVISFDYNNVFETAGGTAFTPTFKSENGSASAPDTILRN
HCCCCCCCEEEEEECCCCCCCEEEEECCCCEECCCCCCEECCCCCCCCCCCCCHHHHHHH
LTGGTMMGTGILAGLNLSVTRLPENGSDATQVGSSPAAGIRGANNKNENLGMANWFKIAV
CCCCEEECCCEEECCCEEEEECCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEE
TSSNCGTFCTNNASDISSLAGRQGDINVDLAPVPLPAGMLLLLTGIGGLAAARRRKS
ECCCCCCEECCCHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHCCCHHHHHHHCCC
>Mature Secondary Structure 
AATIIAGAGSAGVISGDYRASSAIGSGTQTSDHSLWIQNGLGGAIGSDFDFSPDGLLSV
CEEEEECCCCCCEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHH
LGDGTMNLSGTVISQDNANAGFVISFDYNNVFETAGGTAFTPTFKSENGSASAPDTILRN
HCCCCCCCEEEEEECCCCCCCEEEEECCCCEECCCCCCEECCCCCCCCCCCCCHHHHHHH
LTGGTMMGTGILAGLNLSVTRLPENGSDATQVGSSPAAGIRGANNKNENLGMANWFKIAV
CCCCEEECCCEEECCCEEEEECCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEE
TSSNCGTFCTNNASDISSLAGRQGDINVDLAPVPLPAGMLLLLTGIGGLAAARRRKS
ECCCCCCEECCCHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA