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The map label for this gene is 110680591

Identifier: 110680591

GI number: 110680591

Start: 3284326

End: 3285132

Strand: Direct

Name: 110680591

Synonym: RD1_3420

Alternate gene names: NA

Gene position: 3284326-3285132 (Clockwise)

Preceding gene: 110680589

Following gene: 110680597

Centisome position: 79.46

GC content: 62.45

Gene sequence:

>807_bases
ATGACGCGAAACCTATCCATTCTTGCTCTGTCCGTGCTGCTTGCCAGCGCTGCATCTGCACAGGACCGCTTTGAAACCCC
GATAACGGCCGAGGTCCTGCCGGGCTGGGTTCAATCGGATGGCAGCCGCATGGCCGCCCTGCGCCTGACGCTGGCACCGG
GGTGGAAGACCTATTGGCGCGCACCGGGGGATGCGGGCATTCCGCCGCGTTTCGACTGGTCATATTCACGCAACCTCGAA
GCGGTGGGGATTTCGTGGCCGACCCCAAAGGTGTTTGACCAGAACGGCATGCGCTCGGTCGGCTATGACAACACGCTGGT
CATCCCTTTGCGTATCGAACCCAAGCACAACAACCAACCGGTCAGCCTGAATGCGAGGATGGAGCTTGGCATATGTTCCG
ACATCTGCATCCCGCATGAGCTGGAACTGAGTGGCGAAATCCCCGGGGATACGCCCAACCCCACGCCCGCCATCGCGGCG
GCGCTGGCACAACAACCCTACAGCGCGAGCGAAGCGGGTGTGCGCGCCACGGAATGCAGCATCAGCCCCACATCAGACGG
GCTGCAGATCGAGGCGCGGGTGACCATGCCATCGGCGGGGGATCCCGAATACATTGTGATTGAACCCGGACCGGGCGATA
TCTGGGTCAGCGAGGCCAAGACCAAGCGCCGCGGCGGGACCATCGTGGCCACATCCGATATGGTGAACGTGAACGGTGGA
CCGATCGCGCTGGACCGATCCGCCATCCGGATTACCGTTCTCGGTTCGAAATATGCGGTTGATATCCGCGGTTGCGCCGG
CGGCTAG

Upstream 100 bases:

>100_bases
CCATGGGCGTGGCGCAAGACCAAAGAGGGCAAGTCCCGCGAAACATCGCTGACCCGAACGTGACTTGGCTTTTTGTTGCC
AGTACCCCATAGAATAAGGC

Downstream 100 bases:

>100_bases
GCGTCCAGCGGACCTTTGAGGCGCAACCGCAGCGCCAGCACGACATAGCCGAGCAGCGCCAGCAGACCCGCCCCTGCGAT
GAACAGCGCCAGCGCACCGA

Product: hypothetical protein

Products: NA

Alternate protein names: Cytochrome C Biogenesis Protein Transmembrane Region; ThiolDisulfide Interchange Protein DsbD; ThiolDisulfide Interchange Protein; Metal Resistance Protein; ThiolDisulfide Interchange; Thiol-Disulfide Interchange Protein DsbD -Like Protein; Thiol-Disulfide Interchange Protein DsbD-Like; Cytochrome C Biogenesis Protein Transmembrane Protein; Cytochrome C Biogenesis Protein Transmembrane; Signal Peptide Protein; Cytochrome C Biogenesis Transmembrane Protein; Protein-Disulfide Reductase; Signal Peptide; Thioredoxin DsbD Family; ThioDisulfide Interchange Protein; Thiol-Disulfide Interchange Protein DsbD-Like Protein; Copper-Sensitivity B Suppressor

Number of amino acids: Translated: 268; Mature: 267

Protein sequence:

>268_residues
MTRNLSILALSVLLASAASAQDRFETPITAEVLPGWVQSDGSRMAALRLTLAPGWKTYWRAPGDAGIPPRFDWSYSRNLE
AVGISWPTPKVFDQNGMRSVGYDNTLVIPLRIEPKHNNQPVSLNARMELGICSDICIPHELELSGEIPGDTPNPTPAIAA
ALAQQPYSASEAGVRATECSISPTSDGLQIEARVTMPSAGDPEYIVIEPGPGDIWVSEAKTKRRGGTIVATSDMVNVNGG
PIALDRSAIRITVLGSKYAVDIRGCAGG

Sequences:

>Translated_268_residues
MTRNLSILALSVLLASAASAQDRFETPITAEVLPGWVQSDGSRMAALRLTLAPGWKTYWRAPGDAGIPPRFDWSYSRNLE
AVGISWPTPKVFDQNGMRSVGYDNTLVIPLRIEPKHNNQPVSLNARMELGICSDICIPHELELSGEIPGDTPNPTPAIAA
ALAQQPYSASEAGVRATECSISPTSDGLQIEARVTMPSAGDPEYIVIEPGPGDIWVSEAKTKRRGGTIVATSDMVNVNGG
PIALDRSAIRITVLGSKYAVDIRGCAGG
>Mature_267_residues
TRNLSILALSVLLASAASAQDRFETPITAEVLPGWVQSDGSRMAALRLTLAPGWKTYWRAPGDAGIPPRFDWSYSRNLEA
VGISWPTPKVFDQNGMRSVGYDNTLVIPLRIEPKHNNQPVSLNARMELGICSDICIPHELELSGEIPGDTPNPTPAIAAA
LAQQPYSASEAGVRATECSISPTSDGLQIEARVTMPSAGDPEYIVIEPGPGDIWVSEAKTKRRGGTIVATSDMVNVNGGP
IALDRSAIRITVLGSKYAVDIRGCAGG

Specific function: Unknown

COG id: COG4233

COG function: function code OC; Uncharacterized protein predicted to be involved in C-type cytochrome biogenesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28521; Mature: 28389

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRNLSILALSVLLASAASAQDRFETPITAEVLPGWVQSDGSRMAALRLTLAPGWKTYWR
CCCCHHHHHHHHHHHHHCCCHHHHCCCEEHHHCCCHHHCCCCEEEEEEEEECCCCHHEEE
APGDAGIPPRFDWSYSRNLEAVGISWPTPKVFDQNGMRSVGYDNTLVIPLRIEPKHNNQP
CCCCCCCCCCCCCCCCCCCEEEEECCCCCHHCCCCCCCCCCCCCEEEEEEEECCCCCCCC
VSLNARMELGICSDICIPHELELSGEIPGDTPNPTPAIAAALAQQPYSASEAGVRATECS
EEEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEE
ISPTSDGLQIEARVTMPSAGDPEYIVIEPGPGDIWVSEAKTKRRGGTIVATSDMVNVNGG
CCCCCCCEEEEEEEECCCCCCCCEEEEECCCCCEEEECCCHHHCCCEEEEECCEEECCCC
PIALDRSAIRITVLGSKYAVDIRGCAGG
EEEEECCEEEEEEECCEEEEEEEECCCC
>Mature Secondary Structure 
TRNLSILALSVLLASAASAQDRFETPITAEVLPGWVQSDGSRMAALRLTLAPGWKTYWR
CCCHHHHHHHHHHHHHCCCHHHHCCCEEHHHCCCHHHCCCCEEEEEEEEECCCCHHEEE
APGDAGIPPRFDWSYSRNLEAVGISWPTPKVFDQNGMRSVGYDNTLVIPLRIEPKHNNQP
CCCCCCCCCCCCCCCCCCCEEEEECCCCCHHCCCCCCCCCCCCCEEEEEEEECCCCCCCC
VSLNARMELGICSDICIPHELELSGEIPGDTPNPTPAIAAALAQQPYSASEAGVRATECS
EEEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEE
ISPTSDGLQIEARVTMPSAGDPEYIVIEPGPGDIWVSEAKTKRRGGTIVATSDMVNVNGG
CCCCCCCEEEEEEEECCCCCCCCEEEEECCCCCEEEECCCHHHCCCEEEEECCEEECCCC
PIALDRSAIRITVLGSKYAVDIRGCAGG
EEEEECCEEEEEEECCEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA