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The map label for this gene is dnaJ

Identifier: 110680516

GI number: 110680516

Start: 3202496

End: 3203122

Strand: Direct

Name: dnaJ

Synonym: RD1_3338

Alternate gene names: NA

Gene position: 3202496-3203122 (Clockwise)

Preceding gene: 110680514

Following gene: 110680517

Centisome position: 77.48

GC content: 58.37

Gene sequence:

>627_bases
ATGACAAAACCTGATCCATTTGGATTCGACATGTCCGTTTCTTCGTCCAAGAAGAAAAACCCACGCGGCAGACGCGGCAT
GTCCGGCGCCTCGGAAACGTCGAGACGTATCTGCGACAAGGAGGGGTGCAATGATCCGGGCAAATACCGCGCGCCCAAAG
CCCCCGATGTGCTGGATGACTATTACTGGTTCTGCCAGACCCATGTGCGTGAGTATAACCTGAAATGGAATTTCTTTGAC
GGGACCACCGAAGCCGAGATGAACGCGCAGATGTCCAAGGACAAGGTGTGGGAACGCAACACCAAACCGATGGGCGACCC
CGAAGCGCGCGCGTGGGCACGCCTTGGCATCGAGGATCCGCATCAGGTGCTGGGCTCCAACGCGACGCAAAACCCCGGAA
AAGGGGCACAGTCCGGGCGCCGCCTGCCACCGACCGAACGCCGCGCCTTGGAAATCCTCGAAGCGAAAGACACCTGGAGC
AAACCGGAAGTGCGCAAGGCCTACAAGGCGCTCATCAAGGTGCTGCATCCGGATATGAACGGCGGCGATCGCAGTCAGGA
AGAACAATTGCAGGAAGTCGTCTGGGCCTGGGATCAGATCAAGGGCAGCCGGAACTTCAAAAGCTGA

Upstream 100 bases:

>100_bases
TTCAATATCTTGCCGTTTCGACATTTTTTTCCCTCTGCCCCCTTCAATCTTTTCTCAGTCAGTCTAAACTACGCAACCTC
GACTCGTATAGGTGCCAATC

Downstream 100 bases:

>100_bases
CGGGCCAAACAGGCTGCGCAAATATCACCGCCCTTTCCCTTGCACCTGCTTGCAATATATTGCACGAGATGGCGCAGGTT
CGCACCTGCCCCTCAACCAC

Product: chaperone protein DnaJ, putative

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MTKPDPFGFDMSVSSSKKKNPRGRRGMSGASETSRRICDKEGCNDPGKYRAPKAPDVLDDYYWFCQTHVREYNLKWNFFD
GTTEAEMNAQMSKDKVWERNTKPMGDPEARAWARLGIEDPHQVLGSNATQNPGKGAQSGRRLPPTERRALEILEAKDTWS
KPEVRKAYKALIKVLHPDMNGGDRSQEEQLQEVVWAWDQIKGSRNFKS

Sequences:

>Translated_208_residues
MTKPDPFGFDMSVSSSKKKNPRGRRGMSGASETSRRICDKEGCNDPGKYRAPKAPDVLDDYYWFCQTHVREYNLKWNFFD
GTTEAEMNAQMSKDKVWERNTKPMGDPEARAWARLGIEDPHQVLGSNATQNPGKGAQSGRRLPPTERRALEILEAKDTWS
KPEVRKAYKALIKVLHPDMNGGDRSQEEQLQEVVWAWDQIKGSRNFKS
>Mature_207_residues
TKPDPFGFDMSVSSSKKKNPRGRRGMSGASETSRRICDKEGCNDPGKYRAPKAPDVLDDYYWFCQTHVREYNLKWNFFDG
TTEAEMNAQMSKDKVWERNTKPMGDPEARAWARLGIEDPHQVLGSNATQNPGKGAQSGRRLPPTERRALEILEAKDTWSK
PEVRKAYKALIKVLHPDMNGGDRSQEEQLQEVVWAWDQIKGSRNFKS

Specific function: Unknown

COG id: COG2214

COG function: function code O; DnaJ-class molecular chaperone

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001623
- InterPro:   IPR015609
- InterPro:   IPR003095 [H]

Pfam domain/function: PF00226 DnaJ [H]

EC number: NA

Molecular weight: Translated: 23765; Mature: 23634

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKPDPFGFDMSVSSSKKKNPRGRRGMSGASETSRRICDKEGCNDPGKYRAPKAPDVLDD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH
YYWFCQTHVREYNLKWNFFDGTTEAEMNAQMSKDKVWERNTKPMGDPEARAWARLGIEDP
HHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCH
HQVLGSNATQNPGKGAQSGRRLPPTERRALEILEAKDTWSKPEVRKAYKALIKVLHPDMN
HHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCC
GGDRSQEEQLQEVVWAWDQIKGSRNFKS
CCCCCHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TKPDPFGFDMSVSSSKKKNPRGRRGMSGASETSRRICDKEGCNDPGKYRAPKAPDVLDD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH
YYWFCQTHVREYNLKWNFFDGTTEAEMNAQMSKDKVWERNTKPMGDPEARAWARLGIEDP
HHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCH
HQVLGSNATQNPGKGAQSGRRLPPTERRALEILEAKDTWSKPEVRKAYKALIKVLHPDMN
HHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCC
GGDRSQEEQLQEVVWAWDQIKGSRNFKS
CCCCCHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1917840 [H]