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The map label for this gene is 110680514

Identifier: 110680514

GI number: 110680514

Start: 3201688

End: 3202152

Strand: Direct

Name: 110680514

Synonym: RD1_3336

Alternate gene names: NA

Gene position: 3201688-3202152 (Clockwise)

Preceding gene: 110680513

Following gene: 110680516

Centisome position: 77.46

GC content: 57.85

Gene sequence:

>465_bases
ATGCAACGCTACGAATACAAGGTTATTGCCGCCCCGACACGCGGGTTGAAAGCCAAGGGGATCAAGACGGCGGAGGCGCG
GTTCTCCCACGCATTGGAAGCCGTCATGAATGAGATGGCCGCTCAGGGCTGGGAATATCAGCGTGCGGAAACACTGCCAT
CAACGGAACGGTCCGGGCTGACCTCCACAACCACAAAATGGCGCAATGTGCTGGTGTTCCGCAGACCGGAAGTTTCCAGC
GCAACACCGGTCACCGTTACCGAGGCCGCCCCGGATGAACCCAAGGCGGAGGAGTTACCCGAAATCACCACCCCCCAGAC
ACCGCAAGATGACGCCTCCCACAGCGCCGGGGCCAGCCGTATGCTGCATGACAACGGCGTTGAGGAACTCAGTGATGTAT
CCGGTGTTACAACGTCGCTCAAACAGTTGGCAGAAACACGAAAACCTGACAAAACAGATGATTAG

Upstream 100 bases:

>100_bases
GCCTGAACCGGCGCTGCAAAACGATCTGGCCGCGCAACAGACTTTCAGCCCACCTCATCCATTGCTATAGAACGGCGAAA
CCCATGTCGCAGGAGGGCAC

Downstream 100 bases:

>100_bases
AGCGCGACCCTAAACATTTACATCAAGTGCCAGCGCGTGGATTTGGGCAATCAGCTCAGGCCCGAGCGCGCCATGGATCG
CACGGTGGCGCTGGATGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MQRYEYKVIAAPTRGLKAKGIKTAEARFSHALEAVMNEMAAQGWEYQRAETLPSTERSGLTSTTTKWRNVLVFRRPEVSS
ATPVTVTEAAPDEPKAEELPEITTPQTPQDDASHSAGASRMLHDNGVEELSDVSGVTTSLKQLAETRKPDKTDD

Sequences:

>Translated_154_residues
MQRYEYKVIAAPTRGLKAKGIKTAEARFSHALEAVMNEMAAQGWEYQRAETLPSTERSGLTSTTTKWRNVLVFRRPEVSS
ATPVTVTEAAPDEPKAEELPEITTPQTPQDDASHSAGASRMLHDNGVEELSDVSGVTTSLKQLAETRKPDKTDD
>Mature_154_residues
MQRYEYKVIAAPTRGLKAKGIKTAEARFSHALEAVMNEMAAQGWEYQRAETLPSTERSGLTSTTTKWRNVLVFRRPEVSS
ATPVTVTEAAPDEPKAEELPEITTPQTPQDDASHSAGASRMLHDNGVEELSDVSGVTTSLKQLAETRKPDKTDD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16901; Mature: 16901

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRYEYKVIAAPTRGLKAKGIKTAEARFSHALEAVMNEMAAQGWEYQRAETLPSTERSGL
CCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCC
TSTTTKWRNVLVFRRPEVSSATPVTVTEAAPDEPKAEELPEITTPQTPQDDASHSAGASR
CHHHHHHHHEEEEECCCCCCCCCEEEECCCCCCCCHHHCCCCCCCCCCCCCCCHHHCHHH
MLHDNGVEELSDVSGVTTSLKQLAETRKPDKTDD
HHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MQRYEYKVIAAPTRGLKAKGIKTAEARFSHALEAVMNEMAAQGWEYQRAETLPSTERSGL
CCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCC
TSTTTKWRNVLVFRRPEVSSATPVTVTEAAPDEPKAEELPEITTPQTPQDDASHSAGASR
CHHHHHHHHEEEEECCCCCCCCCEEEECCCCCCCCHHHCCCCCCCCCCCCCCCHHHCHHH
MLHDNGVEELSDVSGVTTSLKQLAETRKPDKTDD
HHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA