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The map label for this gene is 110680509

Identifier: 110680509

GI number: 110680509

Start: 3196086

End: 3197357

Strand: Direct

Name: 110680509

Synonym: RD1_3331

Alternate gene names: NA

Gene position: 3196086-3197357 (Clockwise)

Preceding gene: 110680507

Following gene: 110680510

Centisome position: 77.33

GC content: 64.07

Gene sequence:

>1272_bases
ATGGTTTTGTCGACGATGCTGGGGTTTAAAGACCTGTTCAGGCCGGTGCGCCGTGCCGGATCGGCACCGGCAACGCCGCT
GGACGCACAGGACGATGCCGATGCGCGCGCGCTCGATGCCATAACGATCCCCTGCCCTGATCCGACCGAAGAAGAACGCA
TTCGCGACGCGCATCAGGCGCGCGGTCAGTTCCTTGCCCGCCAAGAGAAATGGCACAGGTTGAGCCGGGAGATGGCGGTT
GCCGATCTGACCCGCTCCATCACGCCGGCAGCGATGCCCGTCGCGGATTTGCTGTGTTTTGGCGCGCGTGCCGATGTGGT
GGCGGCCGTTGAACATGCGTTCATGGAGGGCAGCCCGCCGCGCAGCGCGCCACTGACCGAAGGGATCGACGCGCTGGAGC
GGATGATCGCCAGCGCTCCGAGCGACCCCTACCGCGCGATTACCGTGGCACAGGCGCATATGGATATCGGCTGGGCCTGG
CGGCGAAGCCCCGGCAAACGTTGCGGTCCCCCCCGGAACCCACCCGCCTTTTACACGCATTTCGAGCGTGCACGCGCTAT
CCTTACACCATTCGCGCATCTGTCCGACAGTTCACCCCTGTTCCACACAACGTGGTGCATGCTGAACGCGCAAAGCGTGT
CCCCCCCGTCGCGCCTTGCCCGGGACTATGAAACGCTGATCGACCTCAACCCGCTGAATCCGGCCTCGATGCGCGCGTTG
GGAACCTATCTTTCGCCCCGCTGGTACGGCAGCCACCAGGACGTCGAGATCCAAGCCCGCCGCACCGCCGCGCGCACGCA
AAACGCATGGGGGGCCGCGGGGTATGCCTGGGTGATGTTTGACACATTGGCCGATGATCCGGTCGCCTGCGCCAATCTGG
ACGTGGCATTTTTCATCGAGGGTCTGGAAGATATCCTGACCCGCCAGACCGATCAGCATACGGCGAATCTGGTTGCGGCC
TATTGCGCCCGCACAATCGGCGCAAAGCGCACCGGCGATCCAAAGGCGGATGCTGTGCGCACCCAGATTACGGATTGCGC
GCATTGGATCGTGCGCAAACACCTCAAAGAGGTGCACGCCATGGTTTGGGCCCACGCAGCCCACGGGTTTGACAACGCGA
TGCGCGTGCGCTCATCGCGCTGGTTTGCCGCCAAGGGGCGGCAGACCGCCCTGCGCACGCTGGCCGGTTTGTTCCGCCAC
GACATTGCCAGAGGACAGCGCATCACATTCACCACCGACGGCCCCGTCGTCGCAGAATACCGAAGTACATAG

Upstream 100 bases:

>100_bases
CCCTTCAGGGTCAATAATCGTGATATCTCCGCGTGCGCGCCTTTTTTCGGCCCCAAAGCTGCGGCATTTTCTCAACCGTC
ATAGTTGAGGACGCGGGTAA

Downstream 100 bases:

>100_bases
GAAAGGACGCATCATGGGAGAGATACCTGACGACGCCACCCATTGGGACACTGGCGACTGGATAGAATGGCATCGCACCT
CTTTAGGGGTGGATCACAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MVLSTMLGFKDLFRPVRRAGSAPATPLDAQDDADARALDAITIPCPDPTEEERIRDAHQARGQFLARQEKWHRLSREMAV
ADLTRSITPAAMPVADLLCFGARADVVAAVEHAFMEGSPPRSAPLTEGIDALERMIASAPSDPYRAITVAQAHMDIGWAW
RRSPGKRCGPPRNPPAFYTHFERARAILTPFAHLSDSSPLFHTTWCMLNAQSVSPPSRLARDYETLIDLNPLNPASMRAL
GTYLSPRWYGSHQDVEIQARRTAARTQNAWGAAGYAWVMFDTLADDPVACANLDVAFFIEGLEDILTRQTDQHTANLVAA
YCARTIGAKRTGDPKADAVRTQITDCAHWIVRKHLKEVHAMVWAHAAHGFDNAMRVRSSRWFAAKGRQTALRTLAGLFRH
DIARGQRITFTTDGPVVAEYRST

Sequences:

>Translated_423_residues
MVLSTMLGFKDLFRPVRRAGSAPATPLDAQDDADARALDAITIPCPDPTEEERIRDAHQARGQFLARQEKWHRLSREMAV
ADLTRSITPAAMPVADLLCFGARADVVAAVEHAFMEGSPPRSAPLTEGIDALERMIASAPSDPYRAITVAQAHMDIGWAW
RRSPGKRCGPPRNPPAFYTHFERARAILTPFAHLSDSSPLFHTTWCMLNAQSVSPPSRLARDYETLIDLNPLNPASMRAL
GTYLSPRWYGSHQDVEIQARRTAARTQNAWGAAGYAWVMFDTLADDPVACANLDVAFFIEGLEDILTRQTDQHTANLVAA
YCARTIGAKRTGDPKADAVRTQITDCAHWIVRKHLKEVHAMVWAHAAHGFDNAMRVRSSRWFAAKGRQTALRTLAGLFRH
DIARGQRITFTTDGPVVAEYRST
>Mature_423_residues
MVLSTMLGFKDLFRPVRRAGSAPATPLDAQDDADARALDAITIPCPDPTEEERIRDAHQARGQFLARQEKWHRLSREMAV
ADLTRSITPAAMPVADLLCFGARADVVAAVEHAFMEGSPPRSAPLTEGIDALERMIASAPSDPYRAITVAQAHMDIGWAW
RRSPGKRCGPPRNPPAFYTHFERARAILTPFAHLSDSSPLFHTTWCMLNAQSVSPPSRLARDYETLIDLNPLNPASMRAL
GTYLSPRWYGSHQDVEIQARRTAARTQNAWGAAGYAWVMFDTLADDPVACANLDVAFFIEGLEDILTRQTDQHTANLVAA
YCARTIGAKRTGDPKADAVRTQITDCAHWIVRKHLKEVHAMVWAHAAHGFDNAMRVRSSRWFAAKGRQTALRTLAGLFRH
DIARGQRITFTTDGPVVAEYRST

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46873; Mature: 46873

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLSTMLGFKDLFRPVRRAGSAPATPLDAQDDADARALDAITIPCPDPTEEERIRDAHQA
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCEEEECCCCCCHHHHHHHHHHH
RGQFLARQEKWHRLSREMAVADLTRSITPAAMPVADLLCFGARADVVAAVEHAFMEGSPP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC
RSAPLTEGIDALERMIASAPSDPYRAITVAQAHMDIGWAWRRSPGKRCGPPRNPPAFYTH
CCCCHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHCCCCCCCCCCCCCCCCCCCCCHHHHH
FERARAILTPFAHLSDSSPLFHTTWCMLNAQSVSPPSRLARDYETLIDLNPLNPASMRAL
HHHHHHHHHHHHHCCCCCCCEEEHEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHH
GTYLSPRWYGSHQDVEIQARRTAARTQNAWGAAGYAWVMFDTLADDPVACANLDVAFFIE
HHHCCCCCCCCCCCEEEHHHHHHHHHCCCCCCCCCCEEEEHHHCCCCCHHCCCHHHHHHH
GLEDILTRQTDQHTANLVAAYCARTIGAKRTGDPKADAVRTQITDCAHWIVRKHLKEVHA
HHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
MVWAHAAHGFDNAMRVRSSRWFAAKGRQTALRTLAGLFRHDIARGQRITFTTDGPVVAEY
HHHHHHHHCHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEECC
RST
CCC
>Mature Secondary Structure
MVLSTMLGFKDLFRPVRRAGSAPATPLDAQDDADARALDAITIPCPDPTEEERIRDAHQA
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCEEEECCCCCCHHHHHHHHHHH
RGQFLARQEKWHRLSREMAVADLTRSITPAAMPVADLLCFGARADVVAAVEHAFMEGSPP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC
RSAPLTEGIDALERMIASAPSDPYRAITVAQAHMDIGWAWRRSPGKRCGPPRNPPAFYTH
CCCCHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHCCCCCCCCCCCCCCCCCCCCCHHHHH
FERARAILTPFAHLSDSSPLFHTTWCMLNAQSVSPPSRLARDYETLIDLNPLNPASMRAL
HHHHHHHHHHHHHCCCCCCCEEEHEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHH
GTYLSPRWYGSHQDVEIQARRTAARTQNAWGAAGYAWVMFDTLADDPVACANLDVAFFIE
HHHCCCCCCCCCCCEEEHHHHHHHHHCCCCCCCCCCEEEEHHHCCCCCHHCCCHHHHHHH
GLEDILTRQTDQHTANLVAAYCARTIGAKRTGDPKADAVRTQITDCAHWIVRKHLKEVHA
HHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
MVWAHAAHGFDNAMRVRSSRWFAAKGRQTALRTLAGLFRHDIARGQRITFTTDGPVVAEY
HHHHHHHHCHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEECC
RST
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA