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The map label for this gene is 110680437

Identifier: 110680437

GI number: 110680437

Start: 3122831

End: 3123496

Strand: Direct

Name: 110680437

Synonym: RD1_3257

Alternate gene names: NA

Gene position: 3122831-3123496 (Clockwise)

Preceding gene: 110680436

Following gene: 110680442

Centisome position: 75.56

GC content: 59.76

Gene sequence:

>666_bases
ATGCGCCGCACTGACCGTCTTTTTGACATCATACAGATCCTGCGCGACGGCAAATTGCACCGCGCGCAGGACATGGCCGC
GCAGCTGGAAGTGTCCACGCGCACGATTTACCGCGACATGGACACGCTGGTCGCCTCCGGCGTCCCGGTGCAGGGGGAGC
GGGGCGTAGGGTACATGATCACCGAGGCGATCACCCTGCCCCCGTTGACGCTCTCCGTTGCTGAGATGGAAGCGCTGAAC
CTCGGCATCGCCATCGTCGGCGAAGCGGCTGATCCGGACCTTAAGGCGGCCGCATTGAGCCTTGGGGCAAAAATTGACGC
AGTATCCCCAAGCCGCGTTATCGCACAGGCCGATGAATGGAAATTTGCCGTCTACCCATTTGCCGATGCGACCCGCGCAT
TTGCGCATATGCCGACCTTGCGCGCCGCGATCAAGGCCCGCCAAAAGGTCGAATTGAATTACCAATCAAAGCGAAATGAG
CGCACCTGTCGGATCGTACGCCCGCTGCATATGGAATATTGGGGGCGCATCTGGACGTTGACCGCGTGGTGCGAACTCAA
GCAAGCATTTCGCGTCTTTCGCGTCGATCTGATCGAGACCGCGCAGGCCTTGCCCGAACTATTTGTCGATGAGCCCGGCA
AGACACTGGCGGATTACACGCCTTAA

Upstream 100 bases:

>100_bases
ATGACCGCCCCCGAAGCGGCACCCTTCATGAAAATGATTGATGTGCAAAGCGTCAACCTGCGCCACGCCGACATATATTT
TTCATGGGCACCGGAGGATC

Downstream 100 bases:

>100_bases
CCGCCGCGGGTTTGTTCAGGAACCCGTGCGCCCTGTCGCCGCCGGTTGTTTGCTCAGCTTTTAAGCGTCCATCCGGTTTG
GGGCGGCAGGAATGCCTCAA

Product: transcriptional regulator, putative

Products: NA

Alternate protein names: Transcriptional Regulator; DeoR Family Transcriptional Regulator; Helix-Turn-Helix Domain Containing Protein Type; HTH Domain Family; DeoR-Family Transcriptional Regulator; Transcription Regulator Protein; NB-Dependent Receptor; Repressor Transcription Regulator Protein; Transcriptional Regulator Protein; Regulatory Protein; HTH Domain Protein; Bacterial Regulatory Protein DeoR Family; HTH Domain-Containing Protein; Regulatory Protein DeoR; DeoR Family Transriptional Regulator; Transcription Regulator Protein DeoR Family; Protein Containing HTH Domain; Transriptional Regulator DeoR Family; DeoR-Family Protein Transcriptional Regulator; Transcriptional Regulator DeoR Family; HTH Domain-Containing; Transcription Regulator; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator-Like

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MRRTDRLFDIIQILRDGKLHRAQDMAAQLEVSTRTIYRDMDTLVASGVPVQGERGVGYMITEAITLPPLTLSVAEMEALN
LGIAIVGEAADPDLKAAALSLGAKIDAVSPSRVIAQADEWKFAVYPFADATRAFAHMPTLRAAIKARQKVELNYQSKRNE
RTCRIVRPLHMEYWGRIWTLTAWCELKQAFRVFRVDLIETAQALPELFVDEPGKTLADYTP

Sequences:

>Translated_221_residues
MRRTDRLFDIIQILRDGKLHRAQDMAAQLEVSTRTIYRDMDTLVASGVPVQGERGVGYMITEAITLPPLTLSVAEMEALN
LGIAIVGEAADPDLKAAALSLGAKIDAVSPSRVIAQADEWKFAVYPFADATRAFAHMPTLRAAIKARQKVELNYQSKRNE
RTCRIVRPLHMEYWGRIWTLTAWCELKQAFRVFRVDLIETAQALPELFVDEPGKTLADYTP
>Mature_221_residues
MRRTDRLFDIIQILRDGKLHRAQDMAAQLEVSTRTIYRDMDTLVASGVPVQGERGVGYMITEAITLPPLTLSVAEMEALN
LGIAIVGEAADPDLKAAALSLGAKIDAVSPSRVIAQADEWKFAVYPFADATRAFAHMPTLRAAIKARQKVELNYQSKRNE
RTCRIVRPLHMEYWGRIWTLTAWCELKQAFRVFRVDLIETAQALPELFVDEPGKTLADYTP

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24802; Mature: 24802

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRTDRLFDIIQILRDGKLHRAQDMAAQLEVSTRTIYRDMDTLVASGVPVQGERGVGYMI
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEE
TEAITLPPLTLSVAEMEALNLGIAIVGEAADPDLKAAALSLGAKIDAVSPSRVIAQADEW
EHHEECCCCEEHHHHHHHHHCCEEEEECCCCCCHHHHHHHHCCEECCCCCHHHHEECCCC
KFAVYPFADATRAFAHMPTLRAAIKARQKVELNYQSKRNERTCRIVRPLHMEYWGRIWTL
EEEEECCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCEEHHHHHHHHHCCHHHHH
TAWCELKQAFRVFRVDLIETAQALPELFVDEPGKTLADYTP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MRRTDRLFDIIQILRDGKLHRAQDMAAQLEVSTRTIYRDMDTLVASGVPVQGERGVGYMI
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEE
TEAITLPPLTLSVAEMEALNLGIAIVGEAADPDLKAAALSLGAKIDAVSPSRVIAQADEW
EHHEECCCCEEHHHHHHHHHCCEEEEECCCCCCHHHHHHHHCCEECCCCCHHHHEECCCC
KFAVYPFADATRAFAHMPTLRAAIKARQKVELNYQSKRNERTCRIVRPLHMEYWGRIWTL
EEEEECCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCEEHHHHHHHHHCCHHHHH
TAWCELKQAFRVFRVDLIETAQALPELFVDEPGKTLADYTP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA