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The map label for this gene is 110680419

Identifier: 110680419

GI number: 110680419

Start: 3108363

End: 3108932

Strand: Direct

Name: 110680419

Synonym: RD1_3238

Alternate gene names: NA

Gene position: 3108363-3108932 (Clockwise)

Preceding gene: 110680418

Following gene: 110680420

Centisome position: 75.21

GC content: 58.25

Gene sequence:

>570_bases
ATGTTTCTGCTATTTCGTCAGGTGCATAAAAGGAGAATTTCATTGAAACATTTACTATTCCTGCTTGCCCCGCTGGCCGT
TACTGCCTGTGTCGGGCTCGAAATCGAACCGGTTTCGGTCGATGATGGCGCGGATGTGGGCGGCCTGACGCTGGGCACTA
ATACCTTTGTCGGTCAGGTCAGCGGCACATGCGCCGCGGATATGGGCTGCCGGACCCGCCCATCGGGCCGGGATGAATTC
AAATTCGATGTGGCCGACGGCACCGCGATTACCGCAATCAGGGTGTCAGCTGTCGGAACCGGACCGCAGGGCTTTGCGAT
GAAAGCCGTCATCAAGGACCTGCGTGGCGCCACAGAGCGCGCGCCGTTTCTGACGGGTGTCACCTTTCCACCCAACGGCC
AAACGCGCGACGGTCTTGTTGGATTTCTGGACGCAGGGACGGTCGGGCCTGTCCCCGCCCTTTCCGACTACATCATGGAG
GTTGGCACCAGCGATAAGAAAGTGCCCGAAGGAACCTTTGATGTGACCTACAGGCTGGAGCTTGACGTTCAATTCGTGGC
GCCGGAATAA

Upstream 100 bases:

>100_bases
AAACCTGAATCACGTAACGCTGCCTGAAATCAAGGATTTCAACGCGTTACGTGATACTCGATGCTTCAGGTATTTCGTCA
GACGCTCTAGGTGACAGGCG

Downstream 100 bases:

>100_bases
GGGTTTCCCCGTTTTTCTGAGATGTCTCAGGCCCGGATCGCGCGCCGGGCCCGTGATGTCATATCCCGGTGATCCGGTCT
GCGACGTCGCGCTTTAACCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MFLLFRQVHKRRISLKHLLFLLAPLAVTACVGLEIEPVSVDDGADVGGLTLGTNTFVGQVSGTCAADMGCRTRPSGRDEF
KFDVADGTAITAIRVSAVGTGPQGFAMKAVIKDLRGATERAPFLTGVTFPPNGQTRDGLVGFLDAGTVGPVPALSDYIME
VGTSDKKVPEGTFDVTYRLELDVQFVAPE

Sequences:

>Translated_189_residues
MFLLFRQVHKRRISLKHLLFLLAPLAVTACVGLEIEPVSVDDGADVGGLTLGTNTFVGQVSGTCAADMGCRTRPSGRDEF
KFDVADGTAITAIRVSAVGTGPQGFAMKAVIKDLRGATERAPFLTGVTFPPNGQTRDGLVGFLDAGTVGPVPALSDYIME
VGTSDKKVPEGTFDVTYRLELDVQFVAPE
>Mature_189_residues
MFLLFRQVHKRRISLKHLLFLLAPLAVTACVGLEIEPVSVDDGADVGGLTLGTNTFVGQVSGTCAADMGCRTRPSGRDEF
KFDVADGTAITAIRVSAVGTGPQGFAMKAVIKDLRGATERAPFLTGVTFPPNGQTRDGLVGFLDAGTVGPVPALSDYIME
VGTSDKKVPEGTFDVTYRLELDVQFVAPE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20005; Mature: 20005

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLLFRQVHKRRISLKHLLFLLAPLAVTACVGLEIEPVSVDDGADVGGLTLGTNTFVGQV
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCEEECCCCEEECC
SGTCAADMGCRTRPSGRDEFKFDVADGTAITAIRVSAVGTGPQGFAMKAVIKDLRGATER
CCCEECCCCCCCCCCCCCCEEEEECCCCEEEEEEEEEECCCCCCHHHHHHHHHHCCCCCC
APFLTGVTFPPNGQTRDGLVGFLDAGTVGPVPALSDYIMEVGTSDKKVPEGTFDVTYRLE
CCEEEEEEECCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEEEE
LDVQFVAPE
EEEEEECCC
>Mature Secondary Structure
MFLLFRQVHKRRISLKHLLFLLAPLAVTACVGLEIEPVSVDDGADVGGLTLGTNTFVGQV
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCEEECCCCEEECC
SGTCAADMGCRTRPSGRDEFKFDVADGTAITAIRVSAVGTGPQGFAMKAVIKDLRGATER
CCCEECCCCCCCCCCCCCCEEEEECCCCEEEEEEEEEECCCCCCHHHHHHHHHHCCCCCC
APFLTGVTFPPNGQTRDGLVGFLDAGTVGPVPALSDYIMEVGTSDKKVPEGTFDVTYRLE
CCEEEEEEECCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEEEE
LDVQFVAPE
EEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA