| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is 110680360
Identifier: 110680360
GI number: 110680360
Start: 3044777
End: 3045121
Strand: Direct
Name: 110680360
Synonym: RD1_3174
Alternate gene names: NA
Gene position: 3044777-3045121 (Clockwise)
Preceding gene: 110680357
Following gene: 110680364
Centisome position: 73.67
GC content: 58.55
Gene sequence:
>345_bases ATGATGGAAAACGACGCGCGCGTGACGCTGGATTACATTGAATTCACATCGCCCGAGTTGGAAAAGACGCAGGCGTTTTT CGCGGATGCCTTCGGGTGGCAGTTTGTGGATTACGGTGATGATTACCGCGATATCCAAGGGGCCGGGATCGGCGGCGGCC TTGAGCGGGGCGCTTTGCGCGCGCCTCTGCCGGTGCTCAAGACCGATGACCTTGAGGGTATGTTGGCGGTGGTCAGAAAG GCGGGTGCTCAAATCACCGCCGATATTTTCGCTTTTCCCGGCGGACGCCGATTTCAGTTCATTGAACCCGGCGGCAGCGA AATGGCGATCTGGAGCGAGTCCTAG
Upstream 100 bases:
>100_bases TTTCGCATGGCTTGCACCCAAGGGGGCGGTCCAGCGTGCCCTTGGGTCAGGTCCTGTATCGGGTACGCTTGATCCCGAGA CGTAAACAAAGCGGCAGGAT
Downstream 100 bases:
>100_bases CTAGAGGTTCAGCTTGTCGCGCATGAACGCCAAGGCCACCGACAGACCATCCGGCGCGATGCCATGGCCTGTGCCTTTCA TGATATGGGCGAAGACATCT
Product: hypothetical protein
Products: NA
Alternate protein names: Glyoxalase Family Protein; Glyoxalase/Dioxygenase Superfamily Protein; Glyoxalase/Bleomycin Resistance Protein; Glyoxalase; Lactoylglutathione Lyase; Glyoxalase I; Glyoxalase Protein
Number of amino acids: Translated: 114; Mature: 114
Protein sequence:
>114_residues MMENDARVTLDYIEFTSPELEKTQAFFADAFGWQFVDYGDDYRDIQGAGIGGGLERGALRAPLPVLKTDDLEGMLAVVRK AGAQITADIFAFPGGRRFQFIEPGGSEMAIWSES
Sequences:
>Translated_114_residues MMENDARVTLDYIEFTSPELEKTQAFFADAFGWQFVDYGDDYRDIQGAGIGGGLERGALRAPLPVLKTDDLEGMLAVVRK AGAQITADIFAFPGGRRFQFIEPGGSEMAIWSES >Mature_114_residues MMENDARVTLDYIEFTSPELEKTQAFFADAFGWQFVDYGDDYRDIQGAGIGGGLERGALRAPLPVLKTDDLEGMLAVVRK AGAQITADIFAFPGGRRFQFIEPGGSEMAIWSES
Specific function: Unknown
COG id: COG3324
COG function: function code R; Predicted enzyme related to lactoylglutathione lyase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12530; Mature: 12530
Theoretical pI: Translated: 4.06; Mature: 4.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMENDARVTLDYIEFTSPELEKTQAFFADAFGWQFVDYGDDYRDIQGAGIGGGLERGALR CCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCC APLPVLKTDDLEGMLAVVRKAGAQITADIFAFPGGRRFQFIEPGGSEMAIWSES CCCCCEECCCHHHHHHHHHHCCCEEEEEEEECCCCCEEEEECCCCCEEEEEECC >Mature Secondary Structure MMENDARVTLDYIEFTSPELEKTQAFFADAFGWQFVDYGDDYRDIQGAGIGGGLERGALR CCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCC APLPVLKTDDLEGMLAVVRKAGAQITADIFAFPGGRRFQFIEPGGSEMAIWSES CCCCCEECCCHHHHHHHHHHCCCEEEEEEEECCCCCEEEEECCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA