Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is 110680360

Identifier: 110680360

GI number: 110680360

Start: 3044777

End: 3045121

Strand: Direct

Name: 110680360

Synonym: RD1_3174

Alternate gene names: NA

Gene position: 3044777-3045121 (Clockwise)

Preceding gene: 110680357

Following gene: 110680364

Centisome position: 73.67

GC content: 58.55

Gene sequence:

>345_bases
ATGATGGAAAACGACGCGCGCGTGACGCTGGATTACATTGAATTCACATCGCCCGAGTTGGAAAAGACGCAGGCGTTTTT
CGCGGATGCCTTCGGGTGGCAGTTTGTGGATTACGGTGATGATTACCGCGATATCCAAGGGGCCGGGATCGGCGGCGGCC
TTGAGCGGGGCGCTTTGCGCGCGCCTCTGCCGGTGCTCAAGACCGATGACCTTGAGGGTATGTTGGCGGTGGTCAGAAAG
GCGGGTGCTCAAATCACCGCCGATATTTTCGCTTTTCCCGGCGGACGCCGATTTCAGTTCATTGAACCCGGCGGCAGCGA
AATGGCGATCTGGAGCGAGTCCTAG

Upstream 100 bases:

>100_bases
TTTCGCATGGCTTGCACCCAAGGGGGCGGTCCAGCGTGCCCTTGGGTCAGGTCCTGTATCGGGTACGCTTGATCCCGAGA
CGTAAACAAAGCGGCAGGAT

Downstream 100 bases:

>100_bases
CTAGAGGTTCAGCTTGTCGCGCATGAACGCCAAGGCCACCGACAGACCATCCGGCGCGATGCCATGGCCTGTGCCTTTCA
TGATATGGGCGAAGACATCT

Product: hypothetical protein

Products: NA

Alternate protein names: Glyoxalase Family Protein; Glyoxalase/Dioxygenase Superfamily Protein; Glyoxalase/Bleomycin Resistance Protein; Glyoxalase; Lactoylglutathione Lyase; Glyoxalase I; Glyoxalase Protein

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MMENDARVTLDYIEFTSPELEKTQAFFADAFGWQFVDYGDDYRDIQGAGIGGGLERGALRAPLPVLKTDDLEGMLAVVRK
AGAQITADIFAFPGGRRFQFIEPGGSEMAIWSES

Sequences:

>Translated_114_residues
MMENDARVTLDYIEFTSPELEKTQAFFADAFGWQFVDYGDDYRDIQGAGIGGGLERGALRAPLPVLKTDDLEGMLAVVRK
AGAQITADIFAFPGGRRFQFIEPGGSEMAIWSES
>Mature_114_residues
MMENDARVTLDYIEFTSPELEKTQAFFADAFGWQFVDYGDDYRDIQGAGIGGGLERGALRAPLPVLKTDDLEGMLAVVRK
AGAQITADIFAFPGGRRFQFIEPGGSEMAIWSES

Specific function: Unknown

COG id: COG3324

COG function: function code R; Predicted enzyme related to lactoylglutathione lyase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12530; Mature: 12530

Theoretical pI: Translated: 4.06; Mature: 4.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMENDARVTLDYIEFTSPELEKTQAFFADAFGWQFVDYGDDYRDIQGAGIGGGLERGALR
CCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCC
APLPVLKTDDLEGMLAVVRKAGAQITADIFAFPGGRRFQFIEPGGSEMAIWSES
CCCCCEECCCHHHHHHHHHHCCCEEEEEEEECCCCCEEEEECCCCCEEEEEECC
>Mature Secondary Structure
MMENDARVTLDYIEFTSPELEKTQAFFADAFGWQFVDYGDDYRDIQGAGIGGGLERGALR
CCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCC
APLPVLKTDDLEGMLAVVRKAGAQITADIFAFPGGRRFQFIEPGGSEMAIWSES
CCCCCEECCCHHHHHHHHHHCCCEEEEEEEECCCCCEEEEECCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA