Click here to switch to the map view.

The map label for this gene is 110680335

Identifier: 110680335

GI number: 110680335

Start: 3023545

End: 3024144

Strand: Direct

Name: 110680335

Synonym: RD1_3148

Alternate gene names: NA

Gene position: 3023545-3024144 (Clockwise)

Preceding gene: 110680334

Following gene: 110680340

Centisome position: 73.15

GC content: 62.83

Gene sequence:

>600_bases
ATGCCGCTGCAAAACCGCGTGCAACCCACAGGAGAGATCATCGCTCACCCGGCGCGGGGTCAATTCATGGGCAATCGCGG
CGTTTTACATGACTCAGACCAGCGTCTGGGCAAAGCGCGCTGGCGGCACAAGGCATGGGTGACTTGCGTGCTGTCTTTCA
AAAACCGCCGGCGCGCATTGATGAGCCCCCGCCGCTATACCGAGCTGTTCTTTCTGGACGAGGCCGTCGCCTTTGCCGCC
GGGCACCGCCCCTGTGGGGAATGTCGCCGTGCGGATTACAACCGGTTCCGTACAGCTGCGGGAATAACGACACCCATTGC
TGCTTATGACAGTATGCTGCACGCCCAACGCGTCGTGCCACGCCGCTATGAACACCTGCGCTACACCGCTGACATCGCGG
AGTTACCGGATGGCGCGTTTATCCTGTCCGAATCCGGTGCTGCGCATCTGGCCTGGGGCGATGCTCTGTTGCCCTATAGC
CCCTCGGGATATGGCCCGCCAATCCGCCGGCCCGCGCAAGGGAGCGTCACTGTCCTGACACCTAAGCCCCTCGTGGACGT
CCTGCATGCGGGATATGCCCTGCAGGTGGCGCAGCCCTAG

Upstream 100 bases:

>100_bases
GCGAGCCCGCAGAATTCGCGCAACTGGCGGGTTTTATCGTCGAGGCCGGGTATCTGAACGGCGAAGTCATCCGCATTGAT
GGCGCGCTGCGGATGCGCTG

Downstream 100 bases:

>100_bases
ACTTGCGCCTTTTCCTCAAGCATCAGCCATTCTTCTTCGGCTTCTTCCAGCAGTGCTTGCCGCGCAACCAGAGCATCCGT
TGCTTTCTGAAATTTGACGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MPLQNRVQPTGEIIAHPARGQFMGNRGVLHDSDQRLGKARWRHKAWVTCVLSFKNRRRALMSPRRYTELFFLDEAVAFAA
GHRPCGECRRADYNRFRTAAGITTPIAAYDSMLHAQRVVPRRYEHLRYTADIAELPDGAFILSESGAAHLAWGDALLPYS
PSGYGPPIRRPAQGSVTVLTPKPLVDVLHAGYALQVAQP

Sequences:

>Translated_199_residues
MPLQNRVQPTGEIIAHPARGQFMGNRGVLHDSDQRLGKARWRHKAWVTCVLSFKNRRRALMSPRRYTELFFLDEAVAFAA
GHRPCGECRRADYNRFRTAAGITTPIAAYDSMLHAQRVVPRRYEHLRYTADIAELPDGAFILSESGAAHLAWGDALLPYS
PSGYGPPIRRPAQGSVTVLTPKPLVDVLHAGYALQVAQP
>Mature_198_residues
PLQNRVQPTGEIIAHPARGQFMGNRGVLHDSDQRLGKARWRHKAWVTCVLSFKNRRRALMSPRRYTELFFLDEAVAFAAG
HRPCGECRRADYNRFRTAAGITTPIAAYDSMLHAQRVVPRRYEHLRYTADIAELPDGAFILSESGAAHLAWGDALLPYSP
SGYGPPIRRPAQGSVTVLTPKPLVDVLHAGYALQVAQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22184; Mature: 22052

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLQNRVQPTGEIIAHPARGQFMGNRGVLHDSDQRLGKARWRHKAWVTCVLSFKNRRRAL
CCCCCCCCCCHHEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEHHHHHHHHH
MSPRRYTELFFLDEAVAFAAGHRPCGECRRADYNRFRTAAGITTPIAAYDSMLHAQRVVP
CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
RRYEHLRYTADIAELPDGAFILSESGAAHLAWGDALLPYSPSGYGPPIRRPAQGSVTVLT
HHHHHHHHHHHHHHCCCCEEEEECCCCEEEEECCEECCCCCCCCCCCCCCCCCCCEEEEC
PKPLVDVLHAGYALQVAQP
CHHHHHHHHCCEEEEECCC
>Mature Secondary Structure 
PLQNRVQPTGEIIAHPARGQFMGNRGVLHDSDQRLGKARWRHKAWVTCVLSFKNRRRAL
CCCCCCCCCHHEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEHHHHHHHHH
MSPRRYTELFFLDEAVAFAAGHRPCGECRRADYNRFRTAAGITTPIAAYDSMLHAQRVVP
CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
RRYEHLRYTADIAELPDGAFILSESGAAHLAWGDALLPYSPSGYGPPIRRPAQGSVTVLT
HHHHHHHHHHHHHHCCCCEEEEECCCCEEEEECCEECCCCCCCCCCCCCCCCCCCEEEEC
PKPLVDVLHAGYALQVAQP
CHHHHHHHHCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA