| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is cheR [H]
Identifier: 110680252
GI number: 110680252
Start: 2930727
End: 2931611
Strand: Direct
Name: cheR [H]
Synonym: RD1_3061
Alternate gene names: 110680252
Gene position: 2930727-2931611 (Clockwise)
Preceding gene: 110680251
Following gene: 110680253
Centisome position: 70.91
GC content: 45.42
Gene sequence:
>885_bases ATGGTCGAAAAGATGGAAAGCGCTGGTTTAGATGAGGCCAGTTTCAAGTCTATCGCAGAACTTGCTTACAAGGAGAGTGG CCTGCAGCTTGTCGCGGAAAAAATGTCGATGATACAGTCGCGGCTACGACATCGCCTTAAGGCAGTTGGCATCGACACCT TCCCAAGTTATGCACAATTTGTTTGTTCAGAAAGTGGCGTTTCGGAGCGGCGCGAGATGATTTCCGCCTTAACAACAAAC GTTTCACACTTTTTCCGTGAACAGCATCACTTTGACATCCTGCAAGATAAGATTTTACCAGCAAAGATCGATTATCTACG TCAGGGTGGTCGTTTTAGAGTTTGGTCTGCCGGATGCTCAAACGGGCAGGAAGCGTATTCAATTGTTATGGCTACTCTTG ATCGTTATCCAGAAATAGCGGAGCTCGACTTTAGAGTACTTGCAACAGACATTGATCAAAAGGTCGTGGACTTCGCATCT AAAGGAGTATACCCGCAAAGGCTGTTGTCTGGAGTGAGCCCGGACAGATTAAAAAAGTACTTCACTGAGTGTAAAAACGA CAGTGAACCATCTTTTCAGGCCAAGAGCTCGATCAAATCAAGAGTGACTTTTAAGGAACTCAACTTGTTGTCTGATTGGC CCATGAAGCGGCAAATGGATGTTATTTTCTGTCGAAACGTGATCATCTATTTTGATGCAGTCACGCAAAACTCGCTTTGG CCGCGGTTCAAAAATCAACTAAAGCCAGACGGATATCTCTTTTTAGGTCATTCCGAGCGCATTTCAGACCCGGACTTAGC AGGTTTCGCGAACCAAGGCCCAACAACCTATCGACACAAAAAAGCACACGAAGAGTTAGCGCGTGAGGAAAACAAATGTC TCTAA
Upstream 100 bases:
>100_bases GCCAAAATGTGGTCAGCGCGCTCACTTTGATAAACGAGAGAATGATACGTGTCTTGGACTTGTCCACAATCGTTTCAAAA GAACAAAGCAGTGCTGCATA
Downstream 100 bases:
>100_bases GGGATCAGATTCGAATTTTGGTTGTGGATGATATGTCGACCAGTCGCGGGCTTATTACGCAAGCTTTGGATGCTTTTGGC GTGCGAAACGTAACCACGGC
Product: chemotaxis protein methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MVEKMESAGLDEASFKSIAELAYKESGLQLVAEKMSMIQSRLRHRLKAVGIDTFPSYAQFVCSESGVSERREMISALTTN VSHFFREQHHFDILQDKILPAKIDYLRQGGRFRVWSAGCSNGQEAYSIVMATLDRYPEIAELDFRVLATDIDQKVVDFAS KGVYPQRLLSGVSPDRLKKYFTECKNDSEPSFQAKSSIKSRVTFKELNLLSDWPMKRQMDVIFCRNVIIYFDAVTQNSLW PRFKNQLKPDGYLFLGHSERISDPDLAGFANQGPTTYRHKKAHEELAREENKCL
Sequences:
>Translated_294_residues MVEKMESAGLDEASFKSIAELAYKESGLQLVAEKMSMIQSRLRHRLKAVGIDTFPSYAQFVCSESGVSERREMISALTTN VSHFFREQHHFDILQDKILPAKIDYLRQGGRFRVWSAGCSNGQEAYSIVMATLDRYPEIAELDFRVLATDIDQKVVDFAS KGVYPQRLLSGVSPDRLKKYFTECKNDSEPSFQAKSSIKSRVTFKELNLLSDWPMKRQMDVIFCRNVIIYFDAVTQNSLW PRFKNQLKPDGYLFLGHSERISDPDLAGFANQGPTTYRHKKAHEELAREENKCL >Mature_294_residues MVEKMESAGLDEASFKSIAELAYKESGLQLVAEKMSMIQSRLRHRLKAVGIDTFPSYAQFVCSESGVSERREMISALTTN VSHFFREQHHFDILQDKILPAKIDYLRQGGRFRVWSAGCSNGQEAYSIVMATLDRYPEIAELDFRVLATDIDQKVVDFAS KGVYPQRLLSGVSPDRLKKYFTECKNDSEPSFQAKSSIKSRVTFKELNLLSDWPMKRQMDVIFCRNVIIYFDAVTQNSLW PRFKNQLKPDGYLFLGHSERISDPDLAGFANQGPTTYRHKKAHEELAREENKCL
Specific function: Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP (Potential) [H]
COG id: COG1352
COG function: function code NT; Methylase of chemotaxis methyl-accepting proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cheR-type methyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1788193, Length=278, Percent_Identity=36.6906474820144, Blast_Score=181, Evalue=6e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022642 - InterPro: IPR000780 - InterPro: IPR022641 [H]
Pfam domain/function: PF01739 CheR; PF03705 CheR_N [H]
EC number: =2.1.1.80 [H]
Molecular weight: Translated: 33702; Mature: 33702
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: PS50123 CHER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEKMESAGLDEASFKSIAELAYKESGLQLVAEKMSMIQSRLRHRLKAVGIDTFPSYAQF CCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH VCSESGVSERREMISALTTNVSHFFREQHHFDILQDKILPAKIDYLRQGGRFRVWSAGCS HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEECCCC NGQEAYSIVMATLDRYPEIAELDFRVLATDIDQKVVDFASKGVYPQRLLSGVSPDRLKKY CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHH FTECKNDSEPSFQAKSSIKSRVTFKELNLLSDWPMKRQMDVIFCRNVIIYFDAVTQNSLW HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEECHHCCCCC PRFKNQLKPDGYLFLGHSERISDPDLAGFANQGPTTYRHKKAHEELAREENKCL HHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MVEKMESAGLDEASFKSIAELAYKESGLQLVAEKMSMIQSRLRHRLKAVGIDTFPSYAQF CCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH VCSESGVSERREMISALTTNVSHFFREQHHFDILQDKILPAKIDYLRQGGRFRVWSAGCS HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEECCCC NGQEAYSIVMATLDRYPEIAELDFRVLATDIDQKVVDFASKGVYPQRLLSGVSPDRLKKY CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHH FTECKNDSEPSFQAKSSIKSRVTFKELNLLSDWPMKRQMDVIFCRNVIIYFDAVTQNSLW HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEECHHCCCCC PRFKNQLKPDGYLFLGHSERISDPDLAGFANQGPTTYRHKKAHEELAREENKCL HHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA